RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 MTX1Q13505 466 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 MVPQ14764 893 aaKnown RBP17.08■□□□□ 0.32
SPG7-215ENST00000566682 DCAF8Q5TAQ9 597 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 TXNRD3Q86VQ6 643 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 GPC2Q8N158 579 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 COG6Q9Y2V7 657 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.32
SPG7-215ENST00000566682 MROH5Q6ZUA9 1318 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 EYA2O00167 538 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 RAD17O75943 681 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
SPG7-215ENST00000566682 PDE3AQ14432 1141 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 CIAPIN1Q6FI81 312 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
SPG7-215ENST00000566682 SCN9AQ15858 1988 aa17.06■□□□□ 0.32
SPG7-215ENST00000566682 SCN4AP35499 1836 aa17.06■□□□□ 0.32
SPG7-215ENST00000566682 KLRK1P26718 216 aa17.06■□□□□ 0.32
SPG7-215ENST00000566682 L3MBTL3Q96JM7 780 aaPredicted RBP17.06■□□□□ 0.32
SPG7-215ENST00000566682 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
SPG7-215ENST00000566682 DDX19BQ9UMR2 479 aa17.06■□□□□ 0.32
SPG7-215ENST00000566682 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
SPG7-215ENST00000566682 PNMA6EA0A0J9YXQ4 647 aa17.05■□□□□ 0.32
SPG7-215ENST00000566682 TNIP1Q15025 636 aa17.05■□□□□ 0.32
SPG7-215ENST00000566682 METTL24Q5JXM2 366 aa17.05■□□□□ 0.32
SPG7-215ENST00000566682 ATG9AQ7Z3C6 839 aa17.05■□□□□ 0.32
SPG7-215ENST00000566682 SIL1Q9H173 461 aa17.05■□□□□ 0.32
SPG7-215ENST00000566682 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
SPG7-215ENST00000566682 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
SPG7-215ENST00000566682 IRS2Q9Y4H2 1338 aa17.04■□□□□ 0.32
SPG7-215ENST00000566682 PDE8BO95263 885 aa17.04■□□□□ 0.32
SPG7-215ENST00000566682 ATP8B2P98198 1209 aa17.04■□□□□ 0.32
SPG7-215ENST00000566682 UBE4AQ14139 1066 aa17.04■□□□□ 0.32
SPG7-215ENST00000566682 C15orf52Q6ZUT6 534 aaKnown RBP17.04■□□□□ 0.32
SPG7-215ENST00000566682 PODNQ7Z5L7 613 aa17.04■□□□□ 0.32
SPG7-215ENST00000566682 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
SPG7-215ENST00000566682 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
SPG7-215ENST00000566682 PSME4Q14997 1843 aa17.03■□□□□ 0.32
SPG7-215ENST00000566682 PSMD14O00487 310 aa17.03■□□□□ 0.32
SPG7-215ENST00000566682 CIAO1O76071 339 aa17.03■□□□□ 0.32
SPG7-215ENST00000566682 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
SPG7-215ENST00000566682 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
SPG7-215ENST00000566682 SCNN1DP51172 638 aa17.02■□□□□ 0.32
SPG7-215ENST00000566682 RRP1P56182 461 aaKnown RBP17.02■□□□□ 0.32
SPG7-215ENST00000566682 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
SPG7-215ENST00000566682 HACL1Q9UJ83 578 aa17.02■□□□□ 0.32
SPG7-215ENST00000566682 TOMM70O94826 608 aa17.01■□□□□ 0.31
SPG7-215ENST00000566682 IL15P40933 162 aaPredicted RBP17.01■□□□□ 0.31
SPG7-215ENST00000566682 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
SPG7-215ENST00000566682 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
SPG7-215ENST00000566682 CD209Q9NNX6 404 aa17.01■□□□□ 0.31
SPG7-215ENST00000566682 ZBTB40Q9NUA8 1239 aa17.01■□□□□ 0.31
SPG7-215ENST00000566682 VIL1P09327 827 aaKnown RBP17■□□□□ 0.31
SPG7-215ENST00000566682 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
SPG7-215ENST00000566682 EPHX2P34913 555 aa17■□□□□ 0.31
SPG7-215ENST00000566682 EPS15P42566 896 aa17■□□□□ 0.31
SPG7-215ENST00000566682 GMPSP49915 693 aaPredicted RBP17■□□□□ 0.31
SPG7-215ENST00000566682 CEP85Q6P2H3 762 aa17■□□□□ 0.31
SPG7-215ENST00000566682 ZNF804AQ7Z570 1209 aa17■□□□□ 0.31
SPG7-215ENST00000566682 TAF1DQ9H5J8 278 aaPredicted RBP17■□□□□ 0.31
SPG7-215ENST00000566682 CEP126Q9P2H0 1117 aa17■□□□□ 0.31
SPG7-215ENST00000566682 ZNF646O15015 1829 aaPredicted RBP16.99■□□□□ 0.31
SPG7-215ENST00000566682 USP17L3A6NCW0 530 aa16.99■□□□□ 0.31
SPG7-215ENST00000566682 USP17L4A6NCW7 530 aa16.99■□□□□ 0.31
SPG7-215ENST00000566682 FGFR2P21802 821 aa16.99■□□□□ 0.31
SPG7-215ENST00000566682 GYG1P46976 350 aa16.99■□□□□ 0.31
SPG7-215ENST00000566682 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
SPG7-215ENST00000566682 USP17L1Q7RTZ2 530 aa16.99■□□□□ 0.31
SPG7-215ENST00000566682 FAM84BQ96KN1 310 aaPredicted RBP16.99■□□□□ 0.31
SPG7-215ENST00000566682 GPRC5DQ9NZD1 345 aa16.99■□□□□ 0.31
SPG7-215ENST00000566682 IL1R1P14778 569 aa16.98■□□□□ 0.31
SPG7-215ENST00000566682 DPF2Q92785 391 aa16.98■□□□□ 0.31
SPG7-215ENST00000566682 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
SPG7-215ENST00000566682 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
SPG7-215ENST00000566682 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
SPG7-215ENST00000566682 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
SPG7-215ENST00000566682 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
SPG7-215ENST00000566682 HIBADHP31937 336 aaKnown RBP16.97■□□□□ 0.31
SPG7-215ENST00000566682 C1QTNF8P60827 252 aa16.97■□□□□ 0.31
SPG7-215ENST00000566682 G3BP1Q13283 466 aaKnown RBP eCLIP16.97■□□□□ 0.31
SPG7-215ENST00000566682 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
SPG7-215ENST00000566682 TTLL5Q6EMB2 1281 aa16.97■□□□□ 0.31
SPG7-215ENST00000566682 RSBN1LQ6PCB5 846 aaPredicted RBP16.97■□□□□ 0.31
SPG7-215ENST00000566682 RBM46Q8TBY0 533 aaKnown RBP16.97■□□□□ 0.31
SPG7-215ENST00000566682 LPIN2Q92539 896 aa16.97■□□□□ 0.31
SPG7-215ENST00000566682 FBXW7Q969H0 707 aa16.97■□□□□ 0.31
SPG7-215ENST00000566682 SHTN1A0MZ66 631 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
SPG7-215ENST00000566682 SLC5A1P13866 664 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 GTF2IP78347 998 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 TFCP2Q12800 502 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 ATP2B3Q16720 1220 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 EAPPQ56P03 285 aaPredicted RBP16.96■□□□□ 0.31
SPG7-215ENST00000566682 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 DACT2Q5SW24 774 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 FBXO33Q7Z6M2 555 aa16.96■□□□□ 0.31
SPG7-215ENST00000566682 PNMA8AQ86V59 439 aaPredicted RBP16.96■□□□□ 0.31
SPG7-215ENST00000566682 RPAP2Q8IXW5 612 aaPredicted RBP16.96■□□□□ 0.31
SPG7-215ENST00000566682 AGBL3Q8NEM8 1001 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms