RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 CRKLP46109 303 aaKnown RBP20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 IFIT5Q13325 482 aaKnown RBP20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 ITPK1Q13572 414 aa20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 FAM98CQ17RN3 349 aaKnown RBP20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 UBN2Q6ZU65 1347 aa20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 EIF5P55010 431 aaKnown RBP20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 TAF7LQ5H9L4 462 aa20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 TTLL11Q8NHH1 800 aa20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 C8orf37Q96NL8 207 aa20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
KLHDC4-217ENST00000566661 TAF5LO75529 589 aa20.6■□□□□ 0.89
KLHDC4-217ENST00000566661 TOB2Q14106 344 aaPredicted RBP20.6■□□□□ 0.89
KLHDC4-217ENST00000566661 TTC6Q86TZ1 520 aa20.6■□□□□ 0.89
KLHDC4-217ENST00000566661 TICAM2Q86XR7 235 aa20.6■□□□□ 0.89
KLHDC4-217ENST00000566661 PRIMPOLQ96LW4 560 aa20.6■□□□□ 0.89
KLHDC4-217ENST00000566661 SEC62Q99442 399 aaKnown RBP20.6■□□□□ 0.89
KLHDC4-217ENST00000566661 GREM2Q9H772 168 aa20.6■□□□□ 0.89
KLHDC4-217ENST00000566661 GOLIM4O00461 696 aa20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 CDC37L1Q7L3B6 337 aa20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 SPTLC3Q9NUV7 552 aa20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 HMGN5P82970 282 aaKnown RBP20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 ZNF34Q8IZ26 560 aa20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 KBTBD3Q8NAB2 608 aa20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
KLHDC4-217ENST00000566661 ITGA6P23229 1130 aa20.58■□□□□ 0.89
KLHDC4-217ENST00000566661 CTSWP56202 376 aa20.58■□□□□ 0.89
KLHDC4-217ENST00000566661 NOLC1Q14978 699 aaKnown RBP eCLIP20.58■□□□□ 0.89
KLHDC4-217ENST00000566661 MAP3K11Q16584 847 aa20.58■□□□□ 0.89
KLHDC4-217ENST00000566661 CCDC129Q6ZRS4 1044 aa20.58■□□□□ 0.89
KLHDC4-217ENST00000566661 NUP62CLQ9H1M0 184 aa20.58■□□□□ 0.89
KLHDC4-217ENST00000566661 PAG1Q9NWQ8 432 aa20.58■□□□□ 0.89
KLHDC4-217ENST00000566661 PALLDQ8WX93 1383 aa20.58■□□□□ 0.88
KLHDC4-217ENST00000566661 ADORA1P30542 326 aa20.58■□□□□ 0.88
KLHDC4-217ENST00000566661 COL9A3Q14050 684 aaPredicted RBP20.58■□□□□ 0.88
KLHDC4-217ENST00000566661 SLFNL1Q499Z3 407 aa20.58■□□□□ 0.88
KLHDC4-217ENST00000566661 FAM200AQ8TCP9 573 aa20.58■□□□□ 0.88
KLHDC4-217ENST00000566661 FBXO3Q9UK99 471 aa20.58■□□□□ 0.88
KLHDC4-217ENST00000566661 TAF6LQ9Y6J9 622 aa20.58■□□□□ 0.88
KLHDC4-217ENST00000566661 DDX19AQ9NUU7 478 aaKnown RBP20.57■□□□□ 0.88
KLHDC4-217ENST00000566661 U3KPZ7 1027 aaPredicted RBP20.57■□□□□ 0.88
KLHDC4-217ENST00000566661 GOLGA6L6A8MZA4 724 aa20.57■□□□□ 0.88
KLHDC4-217ENST00000566661 IFIT1P09914 478 aaKnown RBP20.57■□□□□ 0.88
KLHDC4-217ENST00000566661 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
KLHDC4-217ENST00000566661 MYH14Q7Z406 1995 aaKnown RBP20.56■□□□□ 0.88
KLHDC4-217ENST00000566661 MYRIPQ8NFW9 859 aa20.56■□□□□ 0.88
KLHDC4-217ENST00000566661 XAGE2Q96GT9 111 aa20.56■□□□□ 0.88
KLHDC4-217ENST00000566661 LDHAL6AQ6ZMR3 332 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 RBM43Q6ZSC3 357 aaKnown RBP20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 AKAP2Q9Y2D5 859 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 RIPOR2Q9Y4F9 1068 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 MYH3P11055 1940 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 FAM177BA6PVY3 158 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 PDE8AO60658 829 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 MCMDC2Q4G0Z9 681 aa20.55■□□□□ 0.88
KLHDC4-217ENST00000566661 ANKRD18BA2A2Z9 1011 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 SUSD4Q5VX71 490 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 SPATA32Q96LK8 384 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 NEK1Q96PY6 1258 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 TTC12Q9H892 705 aaPredicted RBP20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 RIC1Q4ADV7 1423 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 GOLGA6L4A6NEF3 574 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 CAMTA2O94983 1202 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 VPS72Q15906 364 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 DNTTIP2Q5QJE6 756 aaKnown RBP20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 GORABQ5T7V8 394 aa20.54■□□□□ 0.88
KLHDC4-217ENST00000566661 METTL24Q5JXM2 366 aa20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 FERMT3Q86UX7 667 aa20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 FAM13BQ9NYF5 915 aa20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 GTF2F1P35269 517 aaKnown RBP eCLIP20.53■□□□□ 0.882e-6■■■■□ 23.7
KLHDC4-217ENST00000566661 TYRO3Q06418 890 aa20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 TPRNQ4KMQ1 711 aa20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 CCDC158Q5M9N0 1113 aa20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 LEO1Q8WVC0 666 aaPredicted RBP20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 ZSCAN16Q9H4T2 348 aaPredicted RBP20.53■□□□□ 0.88
KLHDC4-217ENST00000566661 HMGB1P09429 215 aaKnown RBP20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 LIG1P18858 919 aa20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 FKBP4Q02790 459 aaKnown RBP eCLIP20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 TTC39AQ5SRH9 613 aa20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 ZNF830Q96NB3 372 aaPredicted RBP20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 LLPHQ9BRT6 129 aaKnown RBP20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 TNMDQ9H2S6 317 aa20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 CNNM1Q9NRU3 951 aa20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 MRVI1Q9Y6F6 885 aa20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 RREB1Q92766 1687 aa20.52■□□□□ 0.88
KLHDC4-217ENST00000566661 CAVIN2O95810 425 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 KCNQ4P56696 695 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 RBM10P98175 930 aaKnown RBP20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 PTF1AQ7RTS3 328 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 TCEANC2Q96MN5 208 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 CLSTN2Q9H4D0 955 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 AP5Z1O43299 807 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 SCARF1Q14162 830 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 ATP2B3Q16720 1220 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 KIAA1524Q8TCG1 905 aa20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.51■□□□□ 0.87
KLHDC4-217ENST00000566661 DACT1Q9NYF0 836 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms