RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SPEF2Q9C093 1822 aa15.24■□□□□ 0.03
UBR1-206ENST00000566493 FANCIQ9NVI1 1328 aa15.24■□□□□ 0.03
UBR1-206ENST00000566493 USP17L3A6NCW0 530 aa15.24■□□□□ 0.03
UBR1-206ENST00000566493 USP17L4A6NCW7 530 aa15.24■□□□□ 0.03
UBR1-206ENST00000566493 GCKRQ14397 625 aa15.24■□□□□ 0.03
UBR1-206ENST00000566493 USP17L1Q7RTZ2 530 aa15.24■□□□□ 0.03
UBR1-206ENST00000566493 MINPP1Q9UNW1 487 aa15.24■□□□□ 0.03
UBR1-206ENST00000566493 ADM5C9JUS6 153 aa15.23■□□□□ 0.03
UBR1-206ENST00000566493 CA12O43570 354 aa15.23■□□□□ 0.03
UBR1-206ENST00000566493 DLK2Q6UY11 383 aa15.23■□□□□ 0.03
UBR1-206ENST00000566493 DNAAF4Q8WXU2 420 aa15.23■□□□□ 0.03
UBR1-206ENST00000566493 GBA2Q9HCG7 927 aaPredicted RBP15.23■□□□□ 0.03
UBR1-206ENST00000566493 MED23Q9ULK4 1368 aa15.23■□□□□ 0.03
UBR1-206ENST00000566493 PSME4Q14997 1843 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 USP17L8P0C7I0 530 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 CCT4P50991 539 aaKnown RBP15.22■□□□□ 0.03
UBR1-206ENST00000566493 BRPF1P55201 1214 aaPredicted RBP15.22■□□□□ 0.03
UBR1-206ENST00000566493 ZNF280AP59817 542 aaPredicted RBP15.22■□□□□ 0.03
UBR1-206ENST00000566493 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
UBR1-206ENST00000566493 NOGQ13253 232 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 SPDYE2Q495Y8 402 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 MPHOSPH8Q99549 860 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 GGA3Q9NZ52 723 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 LEMD3Q9Y2U8 911 aa15.22■□□□□ 0.03
UBR1-206ENST00000566493 ZNF609O15014 1411 aa15.21■□□□□ 0.03
UBR1-206ENST00000566493 VAMP4O75379 141 aa15.21■□□□□ 0.03
UBR1-206ENST00000566493 ITGA6P23229 1130 aa15.21■□□□□ 0.03
UBR1-206ENST00000566493 SCARF1Q14162 830 aa15.21■□□□□ 0.03
UBR1-206ENST00000566493 FBXW7Q969H0 707 aa15.21■□□□□ 0.03
UBR1-206ENST00000566493 ANKRD2Q9GZV1 360 aa15.21■□□□□ 0.03
UBR1-206ENST00000566493 MYOZ2Q9NPC6 264 aa15.21■□□□□ 0.03
UBR1-206ENST00000566493 ANGEL2Q5VTE6 544 aaKnown RBP15.2■□□□□ 0.02
UBR1-206ENST00000566493 RGMBQ6NW40 437 aa15.2■□□□□ 0.02
UBR1-206ENST00000566493 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
UBR1-206ENST00000566493 CCDC102AQ96A19 550 aa15.2■□□□□ 0.02
UBR1-206ENST00000566493 TSKSQ9UJT2 592 aa15.2■□□□□ 0.02
UBR1-206ENST00000566493 ANKRD18BA2A2Z9 1011 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 WTIPA6NIX2 430 aaPredicted RBP15.19■□□□□ 0.02
UBR1-206ENST00000566493 KCNJ4P48050 445 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
UBR1-206ENST00000566493 FAM161AQ3B820 660 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 POTEHQ6S545 545 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 CDCA5Q96FF9 252 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 GMLQ99445 158 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 COA1Q9GZY4 146 aa15.19■□□□□ 0.02
UBR1-206ENST00000566493 ZNF804BA4D1E1 1349 aa15.18■□□□□ 0.02
UBR1-206ENST00000566493 ASTN2O75129 1339 aaPredicted RBP15.18■□□□□ 0.02
UBR1-206ENST00000566493 MYO3BQ8WXR4 1341 aa15.18■□□□□ 0.02
UBR1-206ENST00000566493 CSF1RP07333 972 aa15.18■□□□□ 0.02
UBR1-206ENST00000566493 CASP7P55210 303 aa15.18■□□□□ 0.02
UBR1-206ENST00000566493 STRIP1Q5VSL9 837 aa15.18■□□□□ 0.02
UBR1-206ENST00000566493 FAM9BQ8IZU0 186 aa15.18■□□□□ 0.02
UBR1-206ENST00000566493 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
UBR1-206ENST00000566493 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
UBR1-206ENST00000566493 DACT2Q5SW24 774 aa15.17■□□□□ 0.02
UBR1-206ENST00000566493 ABHD8Q96I13 439 aa15.17■□□□□ 0.02
UBR1-206ENST00000566493 FAM155AB1AL88 458 aaPredicted RBP15.16■□□□□ 0.02
UBR1-206ENST00000566493 F6X3S4 739 aa15.16■□□□□ 0.02
UBR1-206ENST00000566493 MMP14P50281 582 aa15.16■□□□□ 0.02
UBR1-206ENST00000566493 CHRNDQ07001 517 aa15.16■□□□□ 0.02
UBR1-206ENST00000566493 IFIT5Q13325 482 aaKnown RBP15.16■□□□□ 0.02
UBR1-206ENST00000566493 TTLL5Q6EMB2 1281 aa15.16■□□□□ 0.02
UBR1-206ENST00000566493 CHRDL2Q6WN34 429 aa15.16■□□□□ 0.02
UBR1-206ENST00000566493 FKBP1BP68106 108 aa15.15■□□□□ 0.02
UBR1-206ENST00000566493 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
UBR1-206ENST00000566493 BEND3Q5T5X7 828 aa15.15■□□□□ 0.02
UBR1-206ENST00000566493 TXNRD3Q86VQ6 643 aa15.15■□□□□ 0.02
UBR1-206ENST00000566493 ZIC5Q96T25 663 aa15.15■□□□□ 0.02
UBR1-206ENST00000566493 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
UBR1-206ENST00000566493 HDAC9Q9UKV0 1011 aa15.15■□□□□ 0.02
UBR1-206ENST00000566493 NBPF9Q3BBW0 867 aa15.14■□□□□ 0.01
UBR1-206ENST00000566493 TAF7LQ5H9L4 462 aa15.14■□□□□ 0.01
UBR1-206ENST00000566493 C9orf78Q9NZ63 289 aaPredicted RBP15.14■□□□□ 0.01
UBR1-206ENST00000566493 CASP8AP2Q9UKL3 1982 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 GRM8O00222 908 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 SLC10A3P09131 477 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 NF2P35240 595 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 GTF2IP78347 998 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 FOXO4P98177 505 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 CCDC57Q2TAC2 916 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 SAGE1Q9NXZ1 904 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
UBR1-206ENST00000566493 PAPPA2Q9BXP8 1791 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 CCDC85CA6NKD9 419 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 WNT10BO00744 389 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 TAF5LO75529 589 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 KLRK1P26718 216 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 TTLL12Q14166 644 aaPredicted RBP15.12■□□□□ 0.01
UBR1-206ENST00000566493 SLC4A10Q6U841 1118 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 LMBR1LQ6UX01 489 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 KIAA0825Q8IV33 1275 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 HELBQ8NG08 1087 aaPredicted RBP15.12■□□□□ 0.01
UBR1-206ENST00000566493 CD209Q9NNX6 404 aa15.12■□□□□ 0.01
UBR1-206ENST00000566493 SCAF8Q9UPN6 1271 aaKnown RBP15.12■□□□□ 0.01
UBR1-206ENST00000566493 ZNF646O15015 1829 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms