RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 ABCA3Q99758 1704 aa10.96□□□□□ -0.65
BBS4-210ENST00000566400 CSF1RP07333 972 aa10.96□□□□□ -0.65
BBS4-210ENST00000566400 TIMM10P62072 90 aa10.96□□□□□ -0.65
BBS4-210ENST00000566400 RESTQ13127 1097 aa10.96□□□□□ -0.65
BBS4-210ENST00000566400 IFIT5Q13325 482 aaKnown RBP10.96□□□□□ -0.65
BBS4-210ENST00000566400 TTF1Q15361 905 aaPredicted RBP10.96□□□□□ -0.65
BBS4-210ENST00000566400 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
BBS4-210ENST00000566400 DDX54Q8TDD1 881 aaKnown RBP10.96□□□□□ -0.65
BBS4-210ENST00000566400 E7EWF7 191 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 EVCP57679 992 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 SASS6Q6UVJ0 657 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 CCDC129Q6ZRS4 1044 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 FERMT3Q86UX7 667 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 BICD2Q8TD16 824 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 TCEANC2Q96MN5 208 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 CLSTN2Q9H4D0 955 aa10.96□□□□□ -0.66
BBS4-210ENST00000566400 MAST3O60307 1309 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 SCRN1Q12765 414 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 LRRC24Q50LG9 513 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 GIGYF2Q6Y7W6 1299 aaKnown RBP10.95□□□□□ -0.66
BBS4-210ENST00000566400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.95□□□□□ -0.66
BBS4-210ENST00000566400 MTERF4Q7Z6M4 381 aaKnown RBP10.95□□□□□ -0.66
BBS4-210ENST00000566400 PIBF1Q8WXW3 757 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 APPBP2Q92624 585 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 AK7Q96M32 723 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 MAP7D2Q96T17 732 aa10.95□□□□□ -0.66
BBS4-210ENST00000566400 SEC62Q99442 399 aaKnown RBP10.95□□□□□ -0.66
BBS4-210ENST00000566400 MAP3K15Q6ZN16 1313 aa10.94□□□□□ -0.66
BBS4-210ENST00000566400 LRP6O75581 1613 aa10.94□□□□□ -0.66
BBS4-210ENST00000566400 TYRO3Q06418 890 aa10.94□□□□□ -0.66
BBS4-210ENST00000566400 NSUN7Q8NE18 718 aaKnown RBP10.94□□□□□ -0.66
BBS4-210ENST00000566400 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
BBS4-210ENST00000566400 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
BBS4-210ENST00000566400 PRIMPOLQ96LW4 560 aa10.94□□□□□ -0.66
BBS4-210ENST00000566400 DACT1Q9NYF0 836 aa10.94□□□□□ -0.66
BBS4-210ENST00000566400 TAF6LQ9Y6J9 622 aa10.94□□□□□ -0.66
BBS4-210ENST00000566400 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 PTPDC1A2A3K4 754 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 FKBP4Q02790 459 aaKnown RBP eCLIP10.93□□□□□ -0.66
BBS4-210ENST00000566400 GLIPR1L2Q4G1C9 344 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 NCOA7Q8NI08 942 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 RCOR1Q9UKL0 485 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 SALL1Q9NSC2 1324 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 ERVV-1B6SEH8 477 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 JAK2O60674 1132 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 WASHC4Q2M389 1173 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 CCDC73Q6ZRK6 1079 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 STOX1Q6ZVD7 989 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 RALYLQ86SE5 291 aaKnown RBP10.93□□□□□ -0.66
BBS4-210ENST00000566400 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 NDUFB9Q9Y6M9 179 aa10.93□□□□□ -0.66
BBS4-210ENST00000566400 NHSL1Q5SYE7 1610 aa10.92□□□□□ -0.66
BBS4-210ENST00000566400 SPATA31A6Q5VVP1 1343 aa10.92□□□□□ -0.66
BBS4-210ENST00000566400 DYNC1I1O14576 645 aa10.92□□□□□ -0.66
BBS4-210ENST00000566400 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
BBS4-210ENST00000566400 LIG1P18858 919 aa10.92□□□□□ -0.66
BBS4-210ENST00000566400 PDIA3P30101 505 aaKnown RBP10.92□□□□□ -0.66
BBS4-210ENST00000566400 TRDNQ13061 729 aa10.92□□□□□ -0.66
BBS4-210ENST00000566400 HSP90AA2PQ14568 343 aaPredicted RBP10.92□□□□□ -0.66
BBS4-210ENST00000566400 ATP2B3Q16720 1220 aa10.92□□□□□ -0.66
BBS4-210ENST00000566400 ZNF594Q96JF6 807 aaPredicted RBP10.92□□□□□ -0.66
BBS4-210ENST00000566400 TFIP11Q9UBB9 837 aaKnown RBP10.92□□□□□ -0.66
BBS4-210ENST00000566400 R3HCC1Q9Y3T6 440 aaKnown RBP10.92□□□□□ -0.66
BBS4-210ENST00000566400 ATRNO75882 1429 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 ZNF213O14771 459 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 APOBRQ0VD83 1088 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 METTL24Q5JXM2 366 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 DNTTIP2Q5QJE6 756 aaKnown RBP10.91□□□□□ -0.66
BBS4-210ENST00000566400 BRAPQ7Z569 592 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 MRVI1Q9Y6F6 885 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 PDE8AO60658 829 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 CDKL5O76039 1030 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 PLCB2Q00722 1185 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 NOLC1Q14978 699 aaKnown RBP eCLIP10.91□□□□□ -0.66
BBS4-210ENST00000566400 UBE3CQ15386 1083 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 CPLX2Q6PUV4 134 aaKnown RBP10.91□□□□□ -0.66
BBS4-210ENST00000566400 LDHAL6AQ6ZMR3 332 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 TDRD7Q8NHU6 1098 aaKnown RBP10.91□□□□□ -0.66
BBS4-210ENST00000566400 OSBP2Q969R2 916 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 TBC1D2BQ9UPU7 963 aa10.91□□□□□ -0.66
BBS4-210ENST00000566400 TOGARAM1Q9Y4F4 1720 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 GOLGA6L19H0YKK7 550 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 M0R2C6 588 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 KINO60870 393 aaKnown RBP10.9□□□□□ -0.66
BBS4-210ENST00000566400 IL6STP40189 918 aaPredicted RBP10.9□□□□□ -0.66
BBS4-210ENST00000566400 CTSWP56202 376 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 CHAF1AQ13111 956 aaPredicted RBP10.9□□□□□ -0.66
BBS4-210ENST00000566400 DHX8Q14562 1220 aaKnown RBP10.9□□□□□ -0.66
BBS4-210ENST00000566400 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 DNAJC10Q8IXB1 793 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 KCNG4Q8TDN1 519 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 PIGBQ92521 554 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 CDCA7Q9BWT1 371 aaPredicted RBP10.9□□□□□ -0.66
BBS4-210ENST00000566400 PUS3Q9BZE2 481 aaKnown RBP10.9□□□□□ -0.66
BBS4-210ENST00000566400 NAT10Q9H0A0 1025 aaKnown RBP10.9□□□□□ -0.66
BBS4-210ENST00000566400 CNNM1Q9NRU3 951 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 SPTLC3Q9NUV7 552 aa10.9□□□□□ -0.66
BBS4-210ENST00000566400 CCDC9Q9Y3X0 531 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms