RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 HSPD1P10809 573 aaKnown RBP15.81■□□□□ 0.12
LINC00563-201ENST00000566370 CCDC152Q4G0S7 254 aa15.81■□□□□ 0.12
LINC00563-201ENST00000566370 NECAB1Q8N987 351 aa15.81■□□□□ 0.12
LINC00563-201ENST00000566370 LPIN2Q92539 896 aa15.81■□□□□ 0.12
LINC00563-201ENST00000566370 GTF3C6Q969F1 213 aa15.81■□□□□ 0.12
LINC00563-201ENST00000566370 CCDC85AQ96PX6 553 aaPredicted RBP15.81■□□□□ 0.12
LINC00563-201ENST00000566370 MPHOSPH8Q99549 860 aa15.81■□□□□ 0.12
LINC00563-201ENST00000566370 PANK2Q9BZ23 570 aa15.81■□□□□ 0.12
LINC00563-201ENST00000566370 SCAND2PQ9GZW5 306 aaPredicted RBP15.81■□□□□ 0.12
LINC00563-201ENST00000566370 ZNF831Q5JPB2 1677 aa15.81■□□□□ 0.12
LINC00563-201ENST00000566370 LRP5O75197 1615 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 LOC102724428A0A0B4J2F2 783 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
LINC00563-201ENST00000566370 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
LINC00563-201ENST00000566370 H3BQV1 296 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 PDE8BO95263 885 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
LINC00563-201ENST00000566370 SIK1P57059 783 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 IFFO2Q5TF58 517 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 NUTM2AQ8IVF1 878 aaPredicted RBP15.8■□□□□ 0.12
LINC00563-201ENST00000566370 SLC4A9Q96Q91 983 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 TMEM63CQ9P1W3 806 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 CNPY2Q9Y2B0 182 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 ARAP2Q8WZ64 1704 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 LAMB2P55268 1798 aa15.8■□□□□ 0.12
LINC00563-201ENST00000566370 SYCE3A1L190 88 aa15.79■□□□□ 0.12
LINC00563-201ENST00000566370 GOLGA6L4A6NEF3 574 aa15.79■□□□□ 0.12
LINC00563-201ENST00000566370 RGL2O15211 777 aa15.79■□□□□ 0.12
LINC00563-201ENST00000566370 FIBPO43427 364 aa15.79■□□□□ 0.12
LINC00563-201ENST00000566370 DHX16O60231 1041 aaKnown RBP15.79■□□□□ 0.12
LINC00563-201ENST00000566370 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
LINC00563-201ENST00000566370 FOXD4L6Q3SYB3 417 aaPredicted RBP15.79■□□□□ 0.12
LINC00563-201ENST00000566370 FOXD4L3Q6VB84 417 aaPredicted RBP15.79■□□□□ 0.12
LINC00563-201ENST00000566370 RALYLQ86SE5 291 aaKnown RBP15.79■□□□□ 0.12
LINC00563-201ENST00000566370 ZSCAN16Q9H4T2 348 aaPredicted RBP15.79■□□□□ 0.12
LINC00563-201ENST00000566370 RBM27Q9P2N5 1060 aaKnown RBP15.79■□□□□ 0.12
LINC00563-201ENST00000566370 SLIT2O94813 1529 aa15.79■□□□□ 0.12
LINC00563-201ENST00000566370 E7EWF7 191 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 PFKFB2O60825 505 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 ADORA1P30542 326 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 TRDNQ13061 729 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 STK3Q13188 491 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 BRF1Q92994 677 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 ELP1O95163 1332 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 RTL9Q8NET4 1388 aa15.78■□□□□ 0.12
LINC00563-201ENST00000566370 ZAP70P43403 619 aa15.77■□□□□ 0.12
LINC00563-201ENST00000566370 ZNF274Q96GC6 653 aaPredicted RBP15.77■□□□□ 0.12
LINC00563-201ENST00000566370 TCEANC2Q96MN5 208 aa15.77■□□□□ 0.12
LINC00563-201ENST00000566370 PPP1R9BQ96SB3 815 aa15.77■□□□□ 0.12
LINC00563-201ENST00000566370 WDR19Q8NEZ3 1342 aa15.77■□□□□ 0.12
LINC00563-201ENST00000566370 LAMA4Q16363 1823 aa15.77■□□□□ 0.12
LINC00563-201ENST00000566370 ATRNO75882 1429 aa15.77■□□□□ 0.12
LINC00563-201ENST00000566370 M0R2C6 588 aa15.77■□□□□ 0.11
LINC00563-201ENST00000566370 ARID4AP29374 1257 aaPredicted RBP15.77■□□□□ 0.11
LINC00563-201ENST00000566370 MCM5P33992 734 aa15.77■□□□□ 0.11
LINC00563-201ENST00000566370 UBE3CQ15386 1083 aa15.77■□□□□ 0.11
LINC00563-201ENST00000566370 INTS5Q6P9B9 1019 aaKnown RBP15.77■□□□□ 0.11
LINC00563-201ENST00000566370 CLEC4GQ6UXB4 293 aa15.77■□□□□ 0.11
LINC00563-201ENST00000566370 MARCH10Q8NA82 808 aaPredicted RBP15.77■□□□□ 0.11
LINC00563-201ENST00000566370 NCOA7Q8NI08 942 aa15.77■□□□□ 0.11
LINC00563-201ENST00000566370 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.11
LINC00563-201ENST00000566370 CDC5LQ99459 802 aaKnown RBP15.77■□□□□ 0.11
LINC00563-201ENST00000566370 ZNF213O14771 459 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 DNM1Q05193 864 aaKnown RBP15.76■□□□□ 0.11
LINC00563-201ENST00000566370 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 MAP3K12Q12852 859 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 FBXL16Q8N461 479 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 OSBP2Q969R2 916 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 AGXT2Q9BYV1 514 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 GDPD2Q9HCC8 539 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 RTN4Q9NQC3 1192 aaKnown RBP15.76■□□□□ 0.11
LINC00563-201ENST00000566370 CFAP45Q9UL16 551 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 NAP1L2Q9ULW6 460 aaPredicted RBP15.76■□□□□ 0.11
LINC00563-201ENST00000566370 UBN2Q6ZU65 1347 aa15.76■□□□□ 0.11
LINC00563-201ENST00000566370 CAMTA2O94983 1202 aa15.75■□□□□ 0.11
LINC00563-201ENST00000566370 ADD2P35612 726 aa15.75■□□□□ 0.11
LINC00563-201ENST00000566370 EXOSC10Q01780 885 aaKnown RBP15.75■□□□□ 0.11
LINC00563-201ENST00000566370 UVSSAQ2YD98 709 aa15.75■□□□□ 0.11
LINC00563-201ENST00000566370 HS1BP3Q53T59 392 aa15.75■□□□□ 0.11
LINC00563-201ENST00000566370 ATL3Q6DD88 541 aa15.75■□□□□ 0.11
LINC00563-201ENST00000566370 NAA16Q6N069 864 aaPredicted RBP15.75■□□□□ 0.11
LINC00563-201ENST00000566370 VGLL2Q8N8G2 317 aa15.75■□□□□ 0.11
LINC00563-201ENST00000566370 NIP7Q9Y221 180 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC00563-201ENST00000566370 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
LINC00563-201ENST00000566370 TCHHQ07283 1943 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 COL5A3P25940 1745 aaPredicted RBP15.74■□□□□ 0.11
LINC00563-201ENST00000566370 GPAA1O43292 621 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 MCAMP43121 646 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 SLC9C2Q5TAH2 1124 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 SUSD4Q5VX71 490 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 CCDC102BQ68D86 513 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 SPATA32Q96LK8 384 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 TAF6LQ9Y6J9 622 aa15.74■□□□□ 0.11
LINC00563-201ENST00000566370 GADD45BO75293 160 aaPredicted RBP15.73■□□□□ 0.11
LINC00563-201ENST00000566370 IDH1O75874 414 aaKnown RBP15.73■□□□□ 0.11
LINC00563-201ENST00000566370 PIP4K2BP78356 416 aa15.73■□□□□ 0.11
LINC00563-201ENST00000566370 STOX1Q6ZVD7 989 aa15.73■□□□□ 0.11
LINC00563-201ENST00000566370 CDC37L1Q7L3B6 337 aa15.73■□□□□ 0.11
LINC00563-201ENST00000566370 SYNE4Q8N205 404 aa15.73■□□□□ 0.11
LINC00563-201ENST00000566370 SMARCC2Q8TAQ2 1214 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms