RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ENGASEQ8NFI3 743 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 ZNF274Q96GC6 653 aaPredicted RBP25.28■■□□□ 1.64
SPSB3-208ENST00000566339 BPIFA3Q9BQP9 254 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.28■■□□□ 1.64
SPSB3-208ENST00000566339 NRBP1Q9UHY1 535 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 NYAP1Q6ZVC0 841 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 CEP57L1Q8IYX8 460 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 C16orf45Q96MC5 204 aaPredicted RBP25.28■■□□□ 1.64
SPSB3-208ENST00000566339 PARP4Q9UKK3 1724 aaKnown RBP25.28■■□□□ 1.64
SPSB3-208ENST00000566339 AXIN2Q9Y2T1 843 aa25.28■■□□□ 1.64
SPSB3-208ENST00000566339 SALL1Q9NSC2 1324 aa25.27■■□□□ 1.64
SPSB3-208ENST00000566339 A0A1W2PQ27 194 aa25.27■■□□□ 1.64
SPSB3-208ENST00000566339 A0A1W2PQ64 194 aa25.27■■□□□ 1.64
SPSB3-208ENST00000566339 A0A1W2PQD8 194 aa25.27■■□□□ 1.64
SPSB3-208ENST00000566339 EXOSC10Q01780 885 aaKnown RBP25.27■■□□□ 1.64
SPSB3-208ENST00000566339 COL9A3Q14050 684 aaPredicted RBP25.27■■□□□ 1.64
SPSB3-208ENST00000566339 SIL1Q9H173 461 aa25.27■■□□□ 1.64
SPSB3-208ENST00000566339 BECN2A8MW95 431 aa25.26■■□□□ 1.63
SPSB3-208ENST00000566339 FAM193AP78312 1265 aa25.26■■□□□ 1.63
SPSB3-208ENST00000566339 CTNNA3Q9UI47 895 aa25.26■■□□□ 1.63
SPSB3-208ENST00000566339 LAMB4A4D0S4 1761 aa25.26■■□□□ 1.63
SPSB3-208ENST00000566339 SLFNL1Q499Z3 407 aa25.26■■□□□ 1.63
SPSB3-208ENST00000566339 KRT28Q7Z3Y7 464 aa25.26■■□□□ 1.63
SPSB3-208ENST00000566339 SLC52A2Q9HAB3 445 aa25.26■■□□□ 1.63
SPSB3-208ENST00000566339 GLI3P10071 1580 aa25.25■■□□□ 1.63
SPSB3-208ENST00000566339 EVCP57679 992 aa25.25■■□□□ 1.63
SPSB3-208ENST00000566339 SNW1Q13573 536 aaKnown RBP25.25■■□□□ 1.63
SPSB3-208ENST00000566339 CCDC144BQ3MJ40 725 aa25.25■■□□□ 1.63
SPSB3-208ENST00000566339 POTEAQ6S8J7 498 aa25.25■■□□□ 1.63
SPSB3-208ENST00000566339 ANKRD13DQ6ZTN6 518 aa25.25■■□□□ 1.63
SPSB3-208ENST00000566339 CCDC144CPQ8IYA2 1237 aa25.25■■□□□ 1.63
SPSB3-208ENST00000566339 OSBPL5Q9H0X9 879 aaPredicted RBP25.25■■□□□ 1.63
SPSB3-208ENST00000566339 AIMP1Q12904 312 aaKnown RBP25.24■■□□□ 1.63
SPSB3-208ENST00000566339 PTPN14Q15678 1187 aa25.24■■□□□ 1.63
SPSB3-208ENST00000566339 XAGE3Q8WTP9 111 aa25.24■■□□□ 1.63
SPSB3-208ENST00000566339 MYD88Q99836 296 aa25.24■■□□□ 1.63
SPSB3-208ENST00000566339 DDX41Q9UJV9 622 aaKnown RBP25.24■■□□□ 1.63
SPSB3-208ENST00000566339 PTPDC1A2A3K4 754 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 PRAMEF22A3QJZ6 481 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 FGD1P98174 961 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 TFCP2Q12800 502 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 EPHA10Q5JZY3 1008 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.23■■□□□ 1.63
SPSB3-208ENST00000566339 ARID3AQ99856 593 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 MORC2Q9Y6X9 1032 aaPredicted RBP25.23■■□□□ 1.63
SPSB3-208ENST00000566339 C11orf57Q6ZUT1 292 aaPredicted RBP25.23■■□□□ 1.63
SPSB3-208ENST00000566339 LRP10Q7Z4F1 713 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 ERO1AQ96HE7 468 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 RTEL1Q9NZ71 1219 aa25.23■■□□□ 1.63
SPSB3-208ENST00000566339 U2AF2P26368 475 aaKnown RBP eCLIP25.22■■□□□ 1.63
SPSB3-208ENST00000566339 ADALQ6DHV7 355 aa25.22■■□□□ 1.63
SPSB3-208ENST00000566339 COPS6Q7L5N1 327 aa25.22■■□□□ 1.63
SPSB3-208ENST00000566339 DHX40Q8IX18 779 aaKnown RBP25.22■■□□□ 1.63
SPSB3-208ENST00000566339 ZNF397Q8NF99 534 aaPredicted RBP25.22■■□□□ 1.63
SPSB3-208ENST00000566339 LAMA4Q16363 1823 aa25.22■■□□□ 1.63
SPSB3-208ENST00000566339 ARFGEF2Q9Y6D5 1785 aa25.22■■□□□ 1.63
SPSB3-208ENST00000566339 LRRFIP1Q32MZ4 808 aaKnown RBP25.21■■□□□ 1.63
SPSB3-208ENST00000566339 TAF3Q5VWG9 929 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 PRDM10Q9NQV6 1147 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 AFDNP55196 1824 aaKnown RBP25.21■■□□□ 1.63
SPSB3-208ENST00000566339 MEGF6O75095 1541 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 FAM177BA6PVY3 158 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 SNRPA1P09661 255 aaKnown RBP25.21■■□□□ 1.63
SPSB3-208ENST00000566339 SKILP12757 684 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 ZMYM1Q5SVZ6 1142 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 CREBRFQ8IUR6 639 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 CCDC150Q8NCX0 1101 aa25.21■■□□□ 1.63
SPSB3-208ENST00000566339 MRPS27Q92552 414 aaKnown RBP25.21■■□□□ 1.63
SPSB3-208ENST00000566339 CTDNEP1O95476 244 aa25.2■■□□□ 1.62
SPSB3-208ENST00000566339 YEATS4O95619 227 aa25.2■■□□□ 1.62
SPSB3-208ENST00000566339 CCZ1BP86790 482 aa25.2■■□□□ 1.62
SPSB3-208ENST00000566339 CCZ1P86791 482 aaPredicted RBP25.2■■□□□ 1.62
SPSB3-208ENST00000566339 USP28Q96RU2 1077 aa25.2■■□□□ 1.62
SPSB3-208ENST00000566339 CCDC69A6NI79 296 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 NRDCO43847 1150 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 DTNBO60941 627 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 ADAMTS2O95450 1211 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 STOX1Q6ZVD7 989 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 KIF18AQ8NI77 898 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 DDX11Q96FC9 970 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 GOLPH3LQ9H4A5 285 aa25.19■■□□□ 1.62
SPSB3-208ENST00000566339 CASP7P55210 303 aa25.18■■□□□ 1.62
SPSB3-208ENST00000566339 TPM4P67936 248 aa25.18■■□□□ 1.62
SPSB3-208ENST00000566339 FMR1NBQ8N0W7 255 aaPredicted RBP25.18■■□□□ 1.62
SPSB3-208ENST00000566339 CCAR2Q8N163 923 aaKnown RBP25.18■■□□□ 1.62
SPSB3-208ENST00000566339 KLHDC4Q8TBB5 520 aa25.18■■□□□ 1.62
SPSB3-208ENST00000566339 KCNG4Q8TDN1 519 aa25.18■■□□□ 1.62
SPSB3-208ENST00000566339 DBNDD2Q9BQY9 259 aa25.18■■□□□ 1.62
SPSB3-208ENST00000566339 PSDA5PKW4 1024 aaPredicted RBP25.18■■□□□ 1.62
SPSB3-208ENST00000566339 FSIP1Q8NA03 581 aa25.18■■□□□ 1.62
SPSB3-208ENST00000566339 EDC3Q96F86 508 aaKnown RBP25.18■■□□□ 1.62
SPSB3-208ENST00000566339 C8orf37Q96NL8 207 aa25.18■■□□□ 1.62
SPSB3-208ENST00000566339 DNAJC2Q99543 621 aaKnown RBP25.17■■□□□ 1.62
SPSB3-208ENST00000566339 ATG3Q9NT62 314 aa25.17■■□□□ 1.62
SPSB3-208ENST00000566339 CCP110O43303 1012 aa25.16■■□□□ 1.62
SPSB3-208ENST00000566339 DHX16O60231 1041 aaKnown RBP25.16■■□□□ 1.62
SPSB3-208ENST00000566339 PHKG2P15735 406 aa25.16■■□□□ 1.62
SPSB3-208ENST00000566339 BRAPQ7Z569 592 aa25.16■■□□□ 1.62
SPSB3-208ENST00000566339 PLBD2Q8NHP8 589 aa25.16■■□□□ 1.62
SPSB3-208ENST00000566339 RAPGEF4Q8WZA2 1011 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms