RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CACNA1FO60840 1977 aa21.15■□□□□ 0.98
TSR3-202ENST00000566296 IL16Q14005 1332 aa21.14■□□□□ 0.97
TSR3-202ENST00000566296 SLC10A3P09131 477 aa21.14■□□□□ 0.97
TSR3-202ENST00000566296 KIF23Q02241 960 aaPredicted RBP21.14■□□□□ 0.97
TSR3-202ENST00000566296 DGKZQ13574 1117 aa21.14■□□□□ 0.97
TSR3-202ENST00000566296 FBXW7Q969H0 707 aa21.14■□□□□ 0.97
TSR3-202ENST00000566296 GMLQ99445 158 aa21.14■□□□□ 0.97
TSR3-202ENST00000566296 MYO3BQ8WXR4 1341 aa21.13■□□□□ 0.97
TSR3-202ENST00000566296 SLC4A2P04920 1241 aa21.13■□□□□ 0.97
TSR3-202ENST00000566296 CCT4P50991 539 aaKnown RBP21.13■□□□□ 0.97
TSR3-202ENST00000566296 FKBP1BP68106 108 aa21.13■□□□□ 0.97
TSR3-202ENST00000566296 MYH16Q9H6N6 1097 aa21.13■□□□□ 0.97
TSR3-202ENST00000566296 G2E3Q7L622 706 aa21.12■□□□□ 0.97
TSR3-202ENST00000566296 H7C1W4 665 aa21.11■□□□□ 0.97
TSR3-202ENST00000566296 FLIIQ13045 1269 aa21.11■□□□□ 0.97
TSR3-202ENST00000566296 FKBP5Q13451 457 aaPredicted RBP21.11■□□□□ 0.97
TSR3-202ENST00000566296 CCDC184Q52MB2 194 aa21.11■□□□□ 0.97
TSR3-202ENST00000566296 OGFOD1Q8N543 542 aa21.11■□□□□ 0.97
TSR3-202ENST00000566296 PLA2G12BQ9BX93 195 aa21.11■□□□□ 0.97
TSR3-202ENST00000566296 COA1Q9GZY4 146 aa21.11■□□□□ 0.97
TSR3-202ENST00000566296 LEMD3Q9Y2U8 911 aa21.11■□□□□ 0.97
TSR3-202ENST00000566296 ZNF646O15015 1829 aaPredicted RBP21.11■□□□□ 0.97
TSR3-202ENST00000566296 RASAL3Q86YV0 1011 aa21.1■□□□□ 0.97
TSR3-202ENST00000566296 MPHOSPH8Q99549 860 aa21.1■□□□□ 0.97
TSR3-202ENST00000566296 ANKRD2Q9GZV1 360 aa21.1■□□□□ 0.97
TSR3-202ENST00000566296 ITGA6P23229 1130 aa21.09■□□□□ 0.97
TSR3-202ENST00000566296 MLLT1Q03111 559 aaPredicted RBP21.09■□□□□ 0.97
TSR3-202ENST00000566296 GCKRQ14397 625 aa21.09■□□□□ 0.97
TSR3-202ENST00000566296 NCBP3Q53F19 620 aaKnown RBP21.09■□□□□ 0.97
TSR3-202ENST00000566296 DACT2Q5SW24 774 aa21.09■□□□□ 0.97
TSR3-202ENST00000566296 STRIP1Q5VSL9 837 aa21.09■□□□□ 0.97
TSR3-202ENST00000566296 REM2Q8IYK8 340 aaPredicted RBP21.09■□□□□ 0.97
TSR3-202ENST00000566296 DNAAF4Q8WXU2 420 aa21.09■□□□□ 0.97
TSR3-202ENST00000566296 ZNF804BA4D1E1 1349 aa21.08■□□□□ 0.97
TSR3-202ENST00000566296 FANCIQ9NVI1 1328 aa21.08■□□□□ 0.97
TSR3-202ENST00000566296 TRPA1O75762 1119 aa21.08■□□□□ 0.97
TSR3-202ENST00000566296 KCNJ4P48050 445 aa21.08■□□□□ 0.97
TSR3-202ENST00000566296 RNF186Q9NXI6 227 aa21.08■□□□□ 0.97
TSR3-202ENST00000566296 WTIPA6NIX2 430 aaPredicted RBP21.07■□□□□ 0.96
TSR3-202ENST00000566296 NF2P35240 595 aa21.07■□□□□ 0.96
TSR3-202ENST00000566296 MMP14P50281 582 aa21.07■□□□□ 0.96
TSR3-202ENST00000566296 LINS1Q8NG48 757 aa21.07■□□□□ 0.96
TSR3-202ENST00000566296 MXD3Q9BW11 206 aa21.07■□□□□ 0.96
TSR3-202ENST00000566296 MRS2Q9HD23 443 aa21.07■□□□□ 0.96
TSR3-202ENST00000566296 HDAC9Q9UKV0 1011 aa21.07■□□□□ 0.96
TSR3-202ENST00000566296 RGS19P49795 217 aa21.06■□□□□ 0.96
TSR3-202ENST00000566296 TTLL12Q14166 644 aaPredicted RBP21.06■□□□□ 0.96
TSR3-202ENST00000566296 NBPF9Q3BBW0 867 aa21.06■□□□□ 0.96
TSR3-202ENST00000566296 CSRNP1Q96S65 589 aa21.06■□□□□ 0.96
TSR3-202ENST00000566296 TXNRD3Q86VQ6 643 aa21.05■□□□□ 0.96
TSR3-202ENST00000566296 SCAF8Q9UPN6 1271 aaKnown RBP21.05■□□□□ 0.96
TSR3-202ENST00000566296 ANKRD18BA2A2Z9 1011 aa21.04■□□□□ 0.96
TSR3-202ENST00000566296 WNT10BO00744 389 aa21.04■□□□□ 0.96
TSR3-202ENST00000566296 SASH1O94885 1247 aa21.04■□□□□ 0.96
TSR3-202ENST00000566296 CASP7P55210 303 aa21.04■□□□□ 0.96
TSR3-202ENST00000566296 CHRNDQ07001 517 aa21.04■□□□□ 0.96
TSR3-202ENST00000566296 TTLL5Q6EMB2 1281 aa21.04■□□□□ 0.96
TSR3-202ENST00000566296 APOBEC3FQ8IUX4 373 aaKnown RBP21.04■□□□□ 0.96
TSR3-202ENST00000566296 CSF1RP07333 972 aa21.03■□□□□ 0.96
TSR3-202ENST00000566296 KLRK1P26718 216 aa21.03■□□□□ 0.96
TSR3-202ENST00000566296 CHMP3Q9Y3E7 222 aa21.03■□□□□ 0.96
TSR3-202ENST00000566296 A0A1B0GUL6 1792 aa21.02■□□□□ 0.96
TSR3-202ENST00000566296 UBE2Q2LH0YL09 131 aa21.02■□□□□ 0.96
TSR3-202ENST00000566296 PRAMEF18Q5VWM3 479 aa21.02■□□□□ 0.96
TSR3-202ENST00000566296 MOB2Q70IA6 237 aa21.02■□□□□ 0.96
TSR3-202ENST00000566296 KIAA0825Q8IV33 1275 aa21.02■□□□□ 0.96
TSR3-202ENST00000566296 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
TSR3-202ENST00000566296 SALL2Q9Y467 1007 aaPredicted RBP21.02■□□□□ 0.96
TSR3-202ENST00000566296 ANP32CO43423 234 aa21.01■□□□□ 0.95
TSR3-202ENST00000566296 VAMP4O75379 141 aa21.01■□□□□ 0.95
TSR3-202ENST00000566296 GTF2IP78347 998 aa21.01■□□□□ 0.95
TSR3-202ENST00000566296 IFIT5Q13325 482 aaKnown RBP21.01■□□□□ 0.95
TSR3-202ENST00000566296 COL1A1P02452 1464 aaPredicted RBP21.01■□□□□ 0.95
TSR3-202ENST00000566296 EXOSC9Q06265 439 aaKnown RBP21■□□□□ 0.95
TSR3-202ENST00000566296 ARMC9Q7Z3E5 817 aa21■□□□□ 0.95
TSR3-202ENST00000566296 CTU1Q7Z7A3 348 aaKnown RBP21■□□□□ 0.95
TSR3-202ENST00000566296 CD209Q9NNX6 404 aa20.99■□□□□ 0.95
TSR3-202ENST00000566296 F6X3S4 739 aa20.98■□□□□ 0.95
TSR3-202ENST00000566296 ZNF804AQ7Z570 1209 aa20.98■□□□□ 0.95
TSR3-202ENST00000566296 ECM29Q5VYK3 1845 aa20.98■□□□□ 0.95
TSR3-202ENST00000566296 TAF7LQ5H9L4 462 aa20.97■□□□□ 0.95
TSR3-202ENST00000566296 PDE4DIPQ5VU43 2346 aa20.96■□□□□ 0.95
TSR3-202ENST00000566296 TAF5LO75529 589 aa20.96■□□□□ 0.95
TSR3-202ENST00000566296 SREBF2Q12772 1141 aa20.96■□□□□ 0.95
TSR3-202ENST00000566296 DLGAP5Q15398 846 aa20.96■□□□□ 0.95
TSR3-202ENST00000566296 BEND3Q5T5X7 828 aa20.96■□□□□ 0.95
TSR3-202ENST00000566296 C15orf52Q6ZUT6 534 aaKnown RBP20.96■□□□□ 0.95
TSR3-202ENST00000566296 ZBED3Q96IU2 234 aaPredicted RBP20.96■□□□□ 0.95
TSR3-202ENST00000566296 FOXO4P98177 505 aa20.95■□□□□ 0.94
TSR3-202ENST00000566296 MKRN3Q13064 507 aaKnown RBP20.95■□□□□ 0.94
TSR3-202ENST00000566296 PRKG1Q13976 671 aa20.95■□□□□ 0.94
TSR3-202ENST00000566296 CCDC57Q2TAC2 916 aa20.95■□□□□ 0.94
TSR3-202ENST00000566296 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
TSR3-202ENST00000566296 HELBQ8NG08 1087 aaPredicted RBP20.95■□□□□ 0.94
TSR3-202ENST00000566296 SNAP23O00161 211 aa20.94■□□□□ 0.94
TSR3-202ENST00000566296 GRM8O00222 908 aa20.94■□□□□ 0.94
TSR3-202ENST00000566296 MYO1BO43795 1136 aa20.94■□□□□ 0.94
TSR3-202ENST00000566296 LMBR1LQ6UX01 489 aa20.94■□□□□ 0.94
TSR3-202ENST00000566296 ANGEL1Q9UNK9 670 aaKnown RBP20.94■□□□□ 0.94
TSR3-202ENST00000566296 IRS2Q9Y4H2 1338 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms