RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 H7C1D1 291 aa22.11■■□□□ 1.13
MSLN-206ENST00000566269 MAP1SQ66K74 1059 aaPredicted RBP22.11■■□□□ 1.13
MSLN-206ENST00000566269 FTSJ3Q8IY81 847 aaKnown RBP22.11■■□□□ 1.13
MSLN-206ENST00000566269 COA1Q9GZY4 146 aa22.11■■□□□ 1.13
MSLN-206ENST00000566269 USP17L3A6NCW0 530 aa22.1■■□□□ 1.13
MSLN-206ENST00000566269 USP17L4A6NCW7 530 aa22.1■■□□□ 1.13
MSLN-206ENST00000566269 GNAI3P08754 354 aa22.1■■□□□ 1.13
MSLN-206ENST00000566269 VIL1P09327 827 aaKnown RBP22.1■■□□□ 1.13
MSLN-206ENST00000566269 LRRC24Q50LG9 513 aa22.1■■□□□ 1.13
MSLN-206ENST00000566269 USP17L1Q7RTZ2 530 aa22.1■■□□□ 1.13
MSLN-206ENST00000566269 DPF2Q92785 391 aa22.1■■□□□ 1.13
MSLN-206ENST00000566269 MROH5Q6ZUA9 1318 aa22.09■■□□□ 1.13
MSLN-206ENST00000566269 HTRA3P83110 453 aa22.09■■□□□ 1.13
MSLN-206ENST00000566269 METTL24Q5JXM2 366 aa22.09■■□□□ 1.13
MSLN-206ENST00000566269 RSBN1LQ6PCB5 846 aaPredicted RBP22.09■■□□□ 1.13
MSLN-206ENST00000566269 TMEM57Q8N5G2 664 aa22.09■■□□□ 1.13
MSLN-206ENST00000566269 TRPM4Q8TD43 1214 aa22.09■■□□□ 1.13
MSLN-206ENST00000566269 ZNF804AQ7Z570 1209 aa22.08■■□□□ 1.13
MSLN-206ENST00000566269 RIPOR2Q9Y4F9 1068 aa22.08■■□□□ 1.13
MSLN-206ENST00000566269 CNTROBQ8N137 903 aa22.07■■□□□ 1.12
MSLN-206ENST00000566269 IRS2Q9Y4H2 1338 aa22.06■■□□□ 1.12
MSLN-206ENST00000566269 RFX5P48382 616 aaPredicted RBP22.06■■□□□ 1.12
MSLN-206ENST00000566269 TBC1D10BQ4KMP7 808 aaPredicted RBP22.06■■□□□ 1.12
MSLN-206ENST00000566269 C15orf52Q6ZUT6 534 aaKnown RBP22.06■■□□□ 1.12
MSLN-206ENST00000566269 SAMD7Q7Z3H4 446 aa22.06■■□□□ 1.12
MSLN-206ENST00000566269 DZIP1LQ8IYY4 767 aaKnown RBP22.06■■□□□ 1.12
MSLN-206ENST00000566269 AGBL3Q8NEM8 1001 aa22.06■■□□□ 1.12
MSLN-206ENST00000566269 ZNF646O15015 1829 aaPredicted RBP22.06■■□□□ 1.12
MSLN-206ENST00000566269 ZNF609O15014 1411 aa22.06■■□□□ 1.12
MSLN-206ENST00000566269 PTPN12Q05209 780 aaKnown RBP22.05■■□□□ 1.12
MSLN-206ENST00000566269 UBE4AQ14139 1066 aa22.05■■□□□ 1.12
MSLN-206ENST00000566269 RBM26Q5T8P6 1007 aaKnown RBP22.05■■□□□ 1.12
MSLN-206ENST00000566269 ITPRIPQ8IWB1 547 aa22.05■■□□□ 1.12
MSLN-206ENST00000566269 SIL1Q9H173 461 aa22.05■■□□□ 1.12
MSLN-206ENST00000566269 CD209Q9NNX6 404 aa22.05■■□□□ 1.12
MSLN-206ENST00000566269 PASKQ96RG2 1323 aa22.05■■□□□ 1.12
MSLN-206ENST00000566269 EYA2O00167 538 aa22.04■■□□□ 1.12
MSLN-206ENST00000566269 ITGBL1O95965 494 aaPredicted RBP22.04■■□□□ 1.12
MSLN-206ENST00000566269 HIRAP54198 1017 aaPredicted RBP22.04■■□□□ 1.12
MSLN-206ENST00000566269 DACT2Q5SW24 774 aa22.04■■□□□ 1.12
MSLN-206ENST00000566269 STRIP1Q5VSL9 837 aa22.04■■□□□ 1.12
MSLN-206ENST00000566269 MXD3Q9BW11 206 aa22.04■■□□□ 1.12
MSLN-206ENST00000566269 EGFRP00533 1210 aa22.03■■□□□ 1.12
MSLN-206ENST00000566269 GNAI2P04899 355 aa22.03■■□□□ 1.12
MSLN-206ENST00000566269 GTF2IP78347 998 aa22.03■■□□□ 1.12
MSLN-206ENST00000566269 KIF4BQ2VIQ3 1234 aa22.03■■□□□ 1.12
MSLN-206ENST00000566269 TTLL5Q6EMB2 1281 aa22.03■■□□□ 1.12
MSLN-206ENST00000566269 MYO3BQ8WXR4 1341 aa22.03■■□□□ 1.12
MSLN-206ENST00000566269 PDE8BO95263 885 aa22.02■■□□□ 1.12
MSLN-206ENST00000566269 USP17L8P0C7I0 530 aa22.02■■□□□ 1.12
MSLN-206ENST00000566269 RLBP1P12271 317 aa22.02■■□□□ 1.12
MSLN-206ENST00000566269 VGLL2Q8N8G2 317 aa22.02■■□□□ 1.12
MSLN-206ENST00000566269 GMLQ99445 158 aa22.02■■□□□ 1.12
MSLN-206ENST00000566269 PA2G4Q9UQ80 394 aaKnown RBP22.02■■□□□ 1.12
MSLN-206ENST00000566269 SRGAP3O43295 1099 aa22.01■■□□□ 1.11
MSLN-206ENST00000566269 GYG1P46976 350 aa22.01■■□□□ 1.11
MSLN-206ENST00000566269 RCAN3Q9UKA8 241 aa22.01■■□□□ 1.11
MSLN-206ENST00000566269 IL1R1P14778 569 aa22■■□□□ 1.11
MSLN-206ENST00000566269 ZNF280AP59817 542 aaPredicted RBP22■■□□□ 1.11
MSLN-206ENST00000566269 PUM3Q15397 648 aaKnown RBP22■■□□□ 1.11
MSLN-206ENST00000566269 VPS37DQ86XT2 251 aa22■■□□□ 1.11
MSLN-206ENST00000566269 ZC3H15Q8WU90 426 aaKnown RBP22■■□□□ 1.11
MSLN-206ENST00000566269 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
MSLN-206ENST00000566269 JAG2Q9Y219 1238 aa22■■□□□ 1.11
MSLN-206ENST00000566269 TRAF5O00463 557 aa21.99■■□□□ 1.11
MSLN-206ENST00000566269 CIAO1O76071 339 aa21.99■■□□□ 1.11
MSLN-206ENST00000566269 HIBADHP31937 336 aaKnown RBP21.99■■□□□ 1.11
MSLN-206ENST00000566269 ATG9AQ7Z3C6 839 aa21.99■■□□□ 1.11
MSLN-206ENST00000566269 PANK1Q8TE04 598 aa21.99■■□□□ 1.11
MSLN-206ENST00000566269 GLIS2Q9BZE0 524 aaPredicted RBP21.99■■□□□ 1.11
MSLN-206ENST00000566269 MYOZ2Q9NPC6 264 aa21.99■■□□□ 1.11
MSLN-206ENST00000566269 CREBZFQ9NS37 354 aa21.99■■□□□ 1.11
MSLN-206ENST00000566269 FBXO3Q9UK99 471 aa21.99■■□□□ 1.11
MSLN-206ENST00000566269 FMR1Q06787 632 aaKnown RBP eCLIP21.98■■□□□ 1.11
MSLN-206ENST00000566269 MTX1Q13505 466 aa21.98■■□□□ 1.11
MSLN-206ENST00000566269 KIAA0825Q8IV33 1275 aa21.98■■□□□ 1.11
MSLN-206ENST00000566269 OGFOD1Q8N543 542 aa21.98■■□□□ 1.11
MSLN-206ENST00000566269 FAM84BQ96KN1 310 aaPredicted RBP21.98■■□□□ 1.11
MSLN-206ENST00000566269 COPRSQ9NQ92 184 aa21.98■■□□□ 1.11
MSLN-206ENST00000566269 PGAP2Q9UHJ9 254 aa21.98■■□□□ 1.11
MSLN-206ENST00000566269 TMEM88BA6NKF7 163 aa21.97■■□□□ 1.11
MSLN-206ENST00000566269 IFIT1P09914 478 aaKnown RBP21.97■■□□□ 1.11
MSLN-206ENST00000566269 MS4A1P11836 297 aa21.97■■□□□ 1.11
MSLN-206ENST00000566269 IL15P40933 162 aaPredicted RBP21.97■■□□□ 1.11
MSLN-206ENST00000566269 CAVIN4Q5BKX8 364 aa21.97■■□□□ 1.11
MSLN-206ENST00000566269 C1orf115Q9H7X2 142 aa21.97■■□□□ 1.11
MSLN-206ENST00000566269 TRPM7Q96QT4 1865 aa21.96■■□□□ 1.11
MSLN-206ENST00000566269 SLC5A1P13866 664 aa21.96■■□□□ 1.11
MSLN-206ENST00000566269 DNAJC5GQ8N7S2 189 aa21.96■■□□□ 1.11
MSLN-206ENST00000566269 DCPSQ96C86 337 aaKnown RBP21.96■■□□□ 1.11
MSLN-206ENST00000566269 KLRG1Q96E93 195 aa21.96■■□□□ 1.11
MSLN-206ENST00000566269 GGA3Q9NZ52 723 aa21.96■■□□□ 1.11
MSLN-206ENST00000566269 CEP126Q9P2H0 1117 aa21.96■■□□□ 1.11
MSLN-206ENST00000566269 IQSEC3Q9UPP2 1182 aaPredicted RBP21.96■■□□□ 1.11
MSLN-206ENST00000566269 FGFR2P21802 821 aa21.95■■□□□ 1.1
MSLN-206ENST00000566269 SCARF1Q14162 830 aa21.95■■□□□ 1.1
MSLN-206ENST00000566269 CDC37L1Q7L3B6 337 aa21.95■■□□□ 1.1
MSLN-206ENST00000566269 CERS5Q8N5B7 392 aa21.95■■□□□ 1.1
MSLN-206ENST00000566269 LPIN2Q92539 896 aa21.95■■□□□ 1.1
MSLN-206ENST00000566269 HDAC9Q9UKV0 1011 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms