RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 ZNF365Q70YC5 407 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 SLC4A2P04920 1241 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 RAPGEF2Q9Y4G8 1499 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 RANBP6O60518 1105 aaKnown RBP12.05□□□□□ -0.48
SNX29-205ENST00000566228 IDEP14735 1019 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 GTF2F1P35269 517 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNX29-205ENST00000566228 PCK1P35558 622 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 ARHGAP4P98171 946 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 SEL1L2Q5TEA6 688 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 N4BP3O15049 544 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 CDR2Q01850 454 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 CCDC38Q502W7 563 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 CEP57Q86XR8 500 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 CNNM2Q9H8M5 875 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 DUSP27Q5VZP5 1158 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
SNX29-205ENST00000566228 DACT3Q96B18 629 aaPredicted RBP12.05□□□□□ -0.48
SNX29-205ENST00000566228 IFIT3O14879 490 aaKnown RBP12.04□□□□□ -0.48
SNX29-205ENST00000566228 STAT6P42226 847 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 DNA2P51530 1060 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
SNX29-205ENST00000566228 KCNG4Q8TDN1 519 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 PLCB1Q9NQ66 1216 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
SNX29-205ENST00000566228 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 MCUR1Q96AQ8 359 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 ANKRD30BQ9BXX2 1392 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 PLEKHH2Q8IVE3 1493 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 GKAP1Q5VSY0 366 aaPredicted RBP12.04□□□□□ -0.48
SNX29-205ENST00000566228 PRPF38AQ8NAV1 312 aaKnown RBP12.04□□□□□ -0.48
SNX29-205ENST00000566228 DDX27Q96GQ7 796 aaKnown RBP12.04□□□□□ -0.48
SNX29-205ENST00000566228 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 AGTPBP1Q9UPW5 1226 aa12.04□□□□□ -0.48
SNX29-205ENST00000566228 ESCO1Q5FWF5 840 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 ZNF449Q6P9G9 518 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
SNX29-205ENST00000566228 SPDYE3A6NKU9 549 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 HSP90AA5PQ58FG0 334 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 CRNKL1Q9BZJ0 848 aaKnown RBP12.03□□□□□ -0.48
SNX29-205ENST00000566228 SIL1Q9H173 461 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 FRMD4BQ9Y2L6 1034 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 LIG1P18858 919 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 CD2APQ9Y5K6 639 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 XRCC6P12956 609 aaKnown RBP eCLIP12.03□□□□□ -0.482e-6■■■■■ 34.5
SNX29-205ENST00000566228 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 PRDM11Q9NQV5 511 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 EFCAB14O75071 495 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 PLCG2P16885 1265 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 GNG11P61952 73 aa12.03□□□□□ -0.48
SNX29-205ENST00000566228 SYF2O95926 243 aaKnown RBP12.02□□□□□ -0.48
SNX29-205ENST00000566228 RPS6KA2Q15349 733 aa12.02□□□□□ -0.48
SNX29-205ENST00000566228 WHAMMP3Q1A5X7 153 aa12.02□□□□□ -0.48
SNX29-205ENST00000566228 UBL4BQ8N7F7 174 aa12.02□□□□□ -0.48
SNX29-205ENST00000566228 ORC6Q9Y5N6 252 aa12.02□□□□□ -0.48
SNX29-205ENST00000566228 MRVI1Q9Y6F6 885 aa12.02□□□□□ -0.48
SNX29-205ENST00000566228 GABPAQ06546 454 aa12.02□□□□□ -0.48
SNX29-205ENST00000566228 WDR44Q5JSH3 913 aa12.02□□□□□ -0.48
SNX29-205ENST00000566228 DAPK3O43293 454 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 SLC12A2P55011 1212 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 IRX3P78415 501 aaPredicted RBP12.02□□□□□ -0.49
SNX29-205ENST00000566228 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 HOOK2Q96ED9 719 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.49
SNX29-205ENST00000566228 ARHGAP25P42331 645 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 RAP1GDS1P52306 607 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 PNMA2Q9UL42 364 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 ST5P78524 1137 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 IFT81Q8WYA0 676 aa12.02□□□□□ -0.49
SNX29-205ENST00000566228 PPP2R5EQ16537 467 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 MFSD6Q6ZSS7 791 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 NEK11Q8NG66 645 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 PPP4R1Q8TF05 950 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 LARSQ9P2J5 1176 aaKnown RBP12.01□□□□□ -0.49
SNX29-205ENST00000566228 SMTNP53814 917 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 LIN9Q5TKA1 542 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 ATP6V0A1Q93050 837 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 PAWRQ96IZ0 340 aaKnown RBP12.01□□□□□ -0.49
SNX29-205ENST00000566228 UBE2HP62256 183 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 PROSER2Q86WR7 435 aaPredicted RBP12.01□□□□□ -0.49
SNX29-205ENST00000566228 LIMCH1Q9UPQ0 1083 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 PHBP35232 272 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 NACA2Q9H009 215 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 UTP11Q9Y3A2 253 aaKnown RBP12.01□□□□□ -0.49
SNX29-205ENST00000566228 BUB1BO60566 1050 aaPredicted RBP12.01□□□□□ -0.49
SNX29-205ENST00000566228 RUFY4Q6ZNE9 571 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 NBPF11Q86T75 865 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 FSIP1Q8NA03 581 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 PANK1Q8TE04 598 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 TEKT1Q969V4 418 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
SNX29-205ENST00000566228 IPO11Q9UI26 975 aaKnown RBP12.01□□□□□ -0.49
SNX29-205ENST00000566228 TSPY2A6NKD2 308 aa12□□□□□ -0.49
SNX29-205ENST00000566228 MCM4P33991 863 aa12□□□□□ -0.49
SNX29-205ENST00000566228 MAIP1Q8WWC4 291 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms