RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 CCDC174Q6PII3 467 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 CACNA2D4Q7Z3S7 1137 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 DDX17Q92841 729 aaKnown RBP7.49□□□□□ -1.21
LINC01043-201ENST00000565936 PHACTR3Q96KR7 559 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 EPB41L2O43491 1005 aaKnown RBP7.49□□□□□ -1.21
LINC01043-201ENST00000565936 DNAJC10Q8IXB1 793 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 FAM89AQ96GI7 184 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 SPA17Q15506 151 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 HEATR3Q7Z4Q2 680 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 IVNS1ABPQ9Y6Y0 642 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 ANKARQ7Z5J8 1434 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 CCDC172P0C7W6 258 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 ARHGEF6Q15052 776 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 UNC5CLQ8IV45 518 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 BICD1Q96G01 975 aa7.49□□□□□ -1.21
LINC01043-201ENST00000565936 PATL2C9JE40 543 aaKnown RBP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 CHL1O00533 1208 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 TBC1D9Q6ZT07 1266 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 HELBQ8NG08 1087 aaPredicted RBP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 PPIP5K2O43314 1243 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 SLC4A8Q2Y0W8 1093 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 KIAA1328Q86T90 577 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 DDX19AQ9NUU7 478 aaKnown RBP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 SLC5A4Q9NY91 659 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 PTPRTO14522 1441 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 HCLS1P14317 486 aaPredicted RBP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 DLGAP5Q15398 846 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 USP48Q86UV5 1035 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 CCDC144CPQ8IYA2 1237 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 STK24Q9Y6E0 443 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 DKC1O60832 514 aaKnown RBP eCLIP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 PARP1P09874 1014 aaKnown RBP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 SSR1P43307 286 aaKnown RBP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 C20orf194Q5TEA3 1177 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 AS3MTQ9HBK9 375 aa7.48□□□□□ -1.21
LINC01043-201ENST00000565936 RBM8AQ9Y5S9 174 aaKnown RBP7.48□□□□□ -1.21
LINC01043-201ENST00000565936 ANKRD62A6NC57 917 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 A1BGP04217 495 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 CEP85Q6P2H3 762 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 FERMT3Q86UX7 667 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 C2CD5Q86YS7 1000 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 PNMA2Q9UL42 364 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 KIAA0232Q92628 1395 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 GJB2P29033 226 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 GUCY1B3Q02153 619 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 SEPT7Q16181 437 aaKnown RBP7.47□□□□□ -1.21
LINC01043-201ENST00000565936 CFAP100Q494V2 611 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 AATKQ6ZMQ8 1374 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 FERMT1Q9BQL6 677 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 DCTPP1Q9H773 170 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 BCS1LQ9Y276 419 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 WDR17Q8IZU2 1322 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 STX6O43752 255 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 LIG1P18858 919 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 SSFA2P28290 1259 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 PABPC4Q13310 644 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC01043-201ENST00000565936 ALG1Q9BT22 464 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 GOLGA6L10A6NI86 522 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 RPS8P62241 208 aaKnown RBP7.47□□□□□ -1.21
LINC01043-201ENST00000565936 MAP3K9P80192 1104 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 CCDC183Q5T5S1 534 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 DCAF15Q66K64 600 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 LGR6Q9HBX8 967 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 GOPCQ9HD26 462 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 PA2G4Q9UQ80 394 aaKnown RBP7.47□□□□□ -1.21
LINC01043-201ENST00000565936 CCDC171Q6TFL3 1326 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 A0A1B0GUL7 405 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 IDEP14735 1019 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 SDSP20132 328 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 GCKRQ14397 625 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 CCDC40Q4G0X9 1142 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 ESYT1Q9BSJ8 1104 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 EXOC1Q9NV70 894 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 A2ML1A8K2U0 1454 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 ARHGAP31Q2M1Z3 1444 aa7.47□□□□□ -1.21
LINC01043-201ENST00000565936 PRC1O43663 620 aa7.46□□□□□ -1.21
LINC01043-201ENST00000565936 CAVIN2O95810 425 aa7.46□□□□□ -1.21
LINC01043-201ENST00000565936 KIF22Q14807 665 aa7.46□□□□□ -1.21
LINC01043-201ENST00000565936 CCDC102BQ68D86 513 aa7.46□□□□□ -1.21
LINC01043-201ENST00000565936 CSADQ9Y600 493 aa7.46□□□□□ -1.21
LINC01043-201ENST00000565936 ZBED4O75132 1171 aa7.46□□□□□ -1.21
LINC01043-201ENST00000565936 EIF4A1P60842 406 aaKnown RBP7.46□□□□□ -1.21
LINC01043-201ENST00000565936 METP08581 1390 aa7.46□□□□□ -1.21
LINC01043-201ENST00000565936 AOX1Q06278 1338 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 LOC102724428A0A0B4J2F2 783 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 SIK1P57059 783 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 FAM43AQ8N2R8 423 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 MIGA1Q8NAN2 632 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 KCNG4Q8TDN1 519 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 BRF1Q92994 677 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 NMIQ13287 307 aaPredicted RBP7.46□□□□□ -1.22
LINC01043-201ENST00000565936 ZNF408Q9H9D4 720 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 NEFHP12036 1026 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 ARHGAP27Q6ZUM4 889 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 FSIP1Q8NA03 581 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
LINC01043-201ENST00000565936 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.22
LINC01043-201ENST00000565936 KRT13P13646 458 aa7.46□□□□□ -1.22
LINC01043-201ENST00000565936 MTIF2P46199 727 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms