RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 TRIM47Q96LD4 638 aa11.2□□□□□ -0.62
CDH13-207ENST00000565636 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
CDH13-207ENST00000565636 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
CDH13-207ENST00000565636 FER1L6Q2WGJ9 1857 aa11.2□□□□□ -0.62
CDH13-207ENST00000565636 SIPA1L3O60292 1781 aaPredicted RBP11.19□□□□□ -0.62
CDH13-207ENST00000565636 H0YIN7 160 aa11.19□□□□□ -0.62
CDH13-207ENST00000565636 SERPINB2P05120 415 aa11.19□□□□□ -0.62
CDH13-207ENST00000565636 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
CDH13-207ENST00000565636 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
CDH13-207ENST00000565636 LGR6Q9HBX8 967 aa11.19□□□□□ -0.62
CDH13-207ENST00000565636 NMRK2Q9NPI5 230 aa11.19□□□□□ -0.62
CDH13-207ENST00000565636 RNF181Q9P0P0 153 aa11.19□□□□□ -0.62
CDH13-207ENST00000565636 COL15A1P39059 1388 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 SIAH2O43255 324 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 VARSP26640 1264 aaKnown RBP11.18□□□□□ -0.62
CDH13-207ENST00000565636 CTHP32929 405 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 PDE6BP35913 854 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 IL6STP40189 918 aaPredicted RBP11.18□□□□□ -0.62
CDH13-207ENST00000565636 NFIXQ14938 502 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 BRIP1Q9BX63 1249 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
CDH13-207ENST00000565636 KCPQ6ZWJ8 1503 aa11.18□□□□□ -0.62
CDH13-207ENST00000565636 LTBP3Q9NS15 1303 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 GNAT3A8MTJ3 354 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 SPTLC1O15269 473 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 MTHFSDQ2M296 383 aaKnown RBP11.17□□□□□ -0.62
CDH13-207ENST00000565636 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 PRPF38BQ5VTL8 546 aaKnown RBP11.17□□□□□ -0.62
CDH13-207ENST00000565636 CLEC4GQ6UXB4 293 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 TTC5Q8N0Z6 440 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 BAP1Q92560 729 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
CDH13-207ENST00000565636 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 CAPN5O15484 640 aaPredicted RBP11.16□□□□□ -0.62
CDH13-207ENST00000565636 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 LYPD8Q6UX82 237 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
CDH13-207ENST00000565636 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 WWC3Q9ULE0 1092 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 SCN4AP35499 1836 aa11.16□□□□□ -0.62
CDH13-207ENST00000565636 CHRNA5P30532 468 aa11.15□□□□□ -0.62
CDH13-207ENST00000565636 TEFQ10587 303 aa11.15□□□□□ -0.62
CDH13-207ENST00000565636 CNKSR1Q969H4 720 aa11.15□□□□□ -0.62
CDH13-207ENST00000565636 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
CDH13-207ENST00000565636 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.63
CDH13-207ENST00000565636 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
CDH13-207ENST00000565636 SLC39A6Q13433 755 aa11.14□□□□□ -0.63
CDH13-207ENST00000565636 FMNL2Q96PY5 1086 aa11.14□□□□□ -0.63
CDH13-207ENST00000565636 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
CDH13-207ENST00000565636 CEMIPQ8WUJ3 1361 aa11.14□□□□□ -0.63
CDH13-207ENST00000565636 SNRPBP14678 240 aaKnown RBP11.13□□□□□ -0.63
CDH13-207ENST00000565636 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
CDH13-207ENST00000565636 C2CD5Q86YS7 1000 aa11.13□□□□□ -0.63
CDH13-207ENST00000565636 MPNDQ8N594 471 aa11.13□□□□□ -0.63
CDH13-207ENST00000565636 FAM174AQ8TBP5 190 aa11.13□□□□□ -0.63
CDH13-207ENST00000565636 SETDB2Q96T68 719 aa11.13□□□□□ -0.63
CDH13-207ENST00000565636 CARMIL3Q8ND23 1372 aa11.13□□□□□ -0.63
CDH13-207ENST00000565636 TIAM2Q8IVF5 1701 aa11.12□□□□□ -0.63
CDH13-207ENST00000565636 KIF7Q2M1P5 1343 aa11.12□□□□□ -0.63
CDH13-207ENST00000565636 HMOX1P09601 288 aa11.12□□□□□ -0.63
CDH13-207ENST00000565636 IL17REQ8NFR9 667 aa11.12□□□□□ -0.63
CDH13-207ENST00000565636 PCDHB15Q9Y5E8 787 aa11.12□□□□□ -0.63
CDH13-207ENST00000565636 SCN7AQ01118 1682 aa11.11□□□□□ -0.63
CDH13-207ENST00000565636 KLRG2A4D1S0 409 aaPredicted RBP11.11□□□□□ -0.63
CDH13-207ENST00000565636 CANXP27824 592 aaKnown RBP11.11□□□□□ -0.63
CDH13-207ENST00000565636 CCER1Q8TC90 406 aaPredicted RBP11.11□□□□□ -0.63
CDH13-207ENST00000565636 ZNF496Q96IT1 587 aaPredicted RBP11.11□□□□□ -0.63
CDH13-207ENST00000565636 CFAP53Q96M91 514 aa11.11□□□□□ -0.63
CDH13-207ENST00000565636 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
CDH13-207ENST00000565636 PCNTO95613 3336 aa11.1□□□□□ -0.63
CDH13-207ENST00000565636 IQCA1LA6NCM1 817 aa11.1□□□□□ -0.63
CDH13-207ENST00000565636 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
CDH13-207ENST00000565636 SRGNP10124 158 aa11.1□□□□□ -0.63
CDH13-207ENST00000565636 PDE4DQ08499 809 aa11.1□□□□□ -0.63
CDH13-207ENST00000565636 LCE2AQ5TA79 106 aaPredicted RBP11.1□□□□□ -0.63
CDH13-207ENST00000565636 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
CDH13-207ENST00000565636 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
CDH13-207ENST00000565636 BCORQ6W2J9 1755 aa11.1□□□□□ -0.63
CDH13-207ENST00000565636 SLX4Q8IY92 1834 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 COL3A1P02461 1466 aaPredicted RBP11.09□□□□□ -0.63
CDH13-207ENST00000565636 CFAP99D6REC4 459 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 NFKBIEO00221 500 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
CDH13-207ENST00000565636 ST5P78524 1137 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
CDH13-207ENST00000565636 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 TBC1D9BQ66K14 1250 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 PRR5LQ6MZQ0 368 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 TPTE2Q6XPS3 522 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 TSC1Q92574 1164 aa11.09□□□□□ -0.63
CDH13-207ENST00000565636 BTBD11A6QL63 1104 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 AGERQ15109 404 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 TUSC1Q2TAM9 212 aa11.08□□□□□ -0.64
CDH13-207ENST00000565636 RTKN2Q8IZC4 609 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms