RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 LAMB2P55268 1798 aa8.29□□□□□ -1.08
TCF4-229ENST00000565580 SCN4AP35499 1836 aa8.29□□□□□ -1.08
TCF4-229ENST00000565580 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 EPHX2P34913 555 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 LAPTM4AQ15012 233 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 EAPPQ56P03 285 aaPredicted RBP8.28□□□□□ -1.08
TCF4-229ENST00000565580 LDHDQ86WU2 507 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 GPC2Q8N158 579 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 LARGE2Q8N3Y3 721 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 PLBD2Q8NHP8 589 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 ISCA1Q9BUE6 129 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 DBF4Q9UBU7 674 aaPredicted RBP8.28□□□□□ -1.08
TCF4-229ENST00000565580 HACL1Q9UJ83 578 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 HPS5Q9UPZ3 1129 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 ATP6V0A2Q9Y487 856 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 GJA3Q9Y6H8 435 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 SH3TC1Q8TE82 1336 aa8.28□□□□□ -1.08
TCF4-229ENST00000565580 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.08
TCF4-229ENST00000565580 LTBP1Q14766 1721 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 ELL2O00472 640 aaPredicted RBP8.27□□□□□ -1.09
TCF4-229ENST00000565580 AOC3Q16853 763 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 DDX12PQ92771 950 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 FAM89AQ96GI7 184 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 PHAXQ9H814 394 aaKnown RBP8.27□□□□□ -1.09
TCF4-229ENST00000565580 IFT57Q9NWB7 429 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 TAF1P21675 1872 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 COL4A1P02462 1669 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 PASKQ96RG2 1323 aa8.27□□□□□ -1.09
TCF4-229ENST00000565580 DDX60Q8IY21 1712 aaKnown RBP8.26□□□□□ -1.09
TCF4-229ENST00000565580 PPIP5K2O43314 1243 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 MAP3K7O43318 606 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 SCNN1DP51172 638 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 EIF6P56537 245 aaKnown RBP8.26□□□□□ -1.09
TCF4-229ENST00000565580 GNAI1P63096 354 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 GRAPQ13588 217 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 NBR1Q14596 966 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 RTL5Q5HYW3 569 aaPredicted RBP8.26□□□□□ -1.09
TCF4-229ENST00000565580 MAP1SQ66K74 1059 aaPredicted RBP8.26□□□□□ -1.09
TCF4-229ENST00000565580 NIM1KQ8IY84 436 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 C8orf58Q8NAV2 365 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 GRAPLQ8TC17 118 aaPredicted RBP8.26□□□□□ -1.09
TCF4-229ENST00000565580 RTFDC1Q9BY42 306 aaPredicted RBP8.26□□□□□ -1.09
TCF4-229ENST00000565580 HYPKQ9NX55 129 aa8.26□□□□□ -1.09
TCF4-229ENST00000565580 MKRN1Q9UHC7 482 aaKnown RBP8.26□□□□□ -1.09
TCF4-229ENST00000565580 BBOX1O75936 387 aa8.25□□□□□ -1.09
TCF4-229ENST00000565580 EPS15P42566 896 aa8.25□□□□□ -1.09
TCF4-229ENST00000565580 PPP4CP60510 307 aa8.25□□□□□ -1.09
TCF4-229ENST00000565580 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
TCF4-229ENST00000565580 DPP8Q6V1X1 898 aaPredicted RBP8.25□□□□□ -1.09
TCF4-229ENST00000565580 DDX46Q7L014 1031 aaKnown RBP8.25□□□□□ -1.09
TCF4-229ENST00000565580 SP8Q8IXZ3 490 aa8.25□□□□□ -1.09
TCF4-229ENST00000565580 MPNDQ8N594 471 aa8.25□□□□□ -1.09
TCF4-229ENST00000565580 TSPYL6Q8N831 410 aa8.25□□□□□ -1.09
TCF4-229ENST00000565580 CELF1Q92879 486 aaKnown RBP8.25□□□□□ -1.09
TCF4-229ENST00000565580 DUOX1Q9NRD9 1551 aa8.25□□□□□ -1.09
TCF4-229ENST00000565580 HSPA1AP0DMV8 641 aaKnown RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 HSPA1BP0DMV9 641 aaKnown RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 CALD1Q05682 793 aaKnown RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 CXCL9Q07325 125 aa8.24□□□□□ -1.09
TCF4-229ENST00000565580 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 SF3B3Q15393 1217 aaKnown RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 Q6ZNB5 142 aa8.24□□□□□ -1.09
TCF4-229ENST00000565580 RIC3Q7Z5B4 369 aa8.24□□□□□ -1.09
TCF4-229ENST00000565580 PNMA8AQ86V59 439 aaPredicted RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 CNTROBQ8N137 903 aa8.24□□□□□ -1.09
TCF4-229ENST00000565580 TSR2Q969E8 191 aaKnown RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 TMX4Q9H1E5 349 aaPredicted RBP8.24□□□□□ -1.09
TCF4-229ENST00000565580 CNTNAP1P78357 1384 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 LRRC37AA6NMS7 1700 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 TMEM88BA6NKF7 163 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 YDJCA8MPS7 323 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 IRS4O14654 1257 aaPredicted RBP8.23□□□□□ -1.09
TCF4-229ENST00000565580 LMOD1P29536 600 aaPredicted RBP8.23□□□□□ -1.09
TCF4-229ENST00000565580 FMR1Q06787 632 aaKnown RBP eCLIP8.23□□□□□ -1.09
TCF4-229ENST00000565580 KIAA2012Q0VF49 1180 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 SUPT20HQ8NEM7 779 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 JARID2Q92833 1246 aaPredicted RBP8.23□□□□□ -1.09
TCF4-229ENST00000565580 MYD88Q99836 296 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 VPS33BQ9H267 617 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 ZNRF3Q9ULT6 936 aa8.23□□□□□ -1.09
TCF4-229ENST00000565580 RAD17O75943 681 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 VEGFBP49765 207 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
TCF4-229ENST00000565580 GPSM2P81274 684 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 CIAPIN1Q6FI81 312 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 TMC4Q7Z404 712 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 WWC1Q8IX03 1113 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 ZBTB38Q8NAP3 1195 aaPredicted RBP8.22□□□□□ -1.09
TCF4-229ENST00000565580 GPR101Q96P66 508 aaPredicted RBP8.22□□□□□ -1.09
TCF4-229ENST00000565580 SEC31BQ9NQW1 1179 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 GPRC5DQ9NZD1 345 aa8.22□□□□□ -1.09
TCF4-229ENST00000565580 SHTN1A0MZ66 631 aa8.21□□□□□ -1.1
TCF4-229ENST00000565580 TRAF5O00463 557 aa8.21□□□□□ -1.1
TCF4-229ENST00000565580 PCCAP05165 728 aaPredicted RBP8.21□□□□□ -1.1
TCF4-229ENST00000565580 CCDC27Q2M243 656 aa8.21□□□□□ -1.1
TCF4-229ENST00000565580 CCDC30Q5VVM6 783 aa8.21□□□□□ -1.1
TCF4-229ENST00000565580 USP50Q70EL3 339 aaPredicted RBP8.21□□□□□ -1.1
TCF4-229ENST00000565580 G2E3Q7L622 706 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms