RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 FAM20CQ8IXL6 584 aa8.28□□□□□ -1.08
CHD9-215ENST00000565442 CARD10Q9BWT7 1032 aa8.28□□□□□ -1.08
CHD9-215ENST00000565442 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHD9-215ENST00000565442 CEP135Q66GS9 1140 aa8.27□□□□□ -1.09
CHD9-215ENST00000565442 KLHL23Q8NBE8 558 aa8.27□□□□□ -1.09
CHD9-215ENST00000565442 OR13H1Q8NG92 308 aa8.27□□□□□ -1.09
CHD9-215ENST00000565442 FAM83CQ9BQN1 747 aa8.27□□□□□ -1.09
CHD9-215ENST00000565442 FSCN2O14926 492 aa8.26□□□□□ -1.09
CHD9-215ENST00000565442 CDC25BP30305 580 aa8.26□□□□□ -1.09
CHD9-215ENST00000565442 HYAL2Q12891 473 aa8.26□□□□□ -1.09
CHD9-215ENST00000565442 COX20Q5RI15 118 aa8.26□□□□□ -1.09
CHD9-215ENST00000565442 COL13A1Q5TAT6 717 aaPredicted RBP8.26□□□□□ -1.09
CHD9-215ENST00000565442 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.26□□□□□ -1.09
CHD9-215ENST00000565442 FOXD4L4Q8WXT5 416 aaPredicted RBP8.26□□□□□ -1.09
CHD9-215ENST00000565442 FAM117BQ6P1L5 589 aa8.25□□□□□ -1.09
CHD9-215ENST00000565442 BEND4Q6ZU67 534 aa8.25□□□□□ -1.09
CHD9-215ENST00000565442 UBASH3BQ8TF42 649 aa8.25□□□□□ -1.09
CHD9-215ENST00000565442 SPACA7Q96KW9 195 aa8.25□□□□□ -1.09
CHD9-215ENST00000565442 KCNF1Q9H3M0 494 aa8.25□□□□□ -1.09
CHD9-215ENST00000565442 DDX3YO15523 660 aaKnown RBP8.24□□□□□ -1.09
CHD9-215ENST00000565442 SART1O43290 800 aaKnown RBP8.24□□□□□ -1.09
CHD9-215ENST00000565442 ADAM11O75078 769 aa8.24□□□□□ -1.09
CHD9-215ENST00000565442 ATG7O95352 703 aa8.24□□□□□ -1.09
CHD9-215ENST00000565442 BMP3P12645 472 aa8.24□□□□□ -1.09
CHD9-215ENST00000565442 JAG1P78504 1218 aa8.24□□□□□ -1.09
CHD9-215ENST00000565442 ADAMTSL4Q6UY14 1074 aa8.24□□□□□ -1.09
CHD9-215ENST00000565442 ETFBKMTQ8IXQ9 262 aa8.24□□□□□ -1.09
CHD9-215ENST00000565442 ABI1Q8IZP0 508 aa8.24□□□□□ -1.09
CHD9-215ENST00000565442 CARNS1A5YM72 827 aa8.23□□□□□ -1.09
CHD9-215ENST00000565442 WDR64B1ANS9 1081 aa8.23□□□□□ -1.09
CHD9-215ENST00000565442 UBAP1LF5GYI3 381 aa8.23□□□□□ -1.09
CHD9-215ENST00000565442 EPHA1P21709 976 aa8.23□□□□□ -1.09
CHD9-215ENST00000565442 ANKRD34AQ69YU3 496 aa8.23□□□□□ -1.09
CHD9-215ENST00000565442 RASSF4Q9H2L5 321 aa8.23□□□□□ -1.09
CHD9-215ENST00000565442 HOXA10P31260 410 aaPredicted RBP8.22□□□□□ -1.09
CHD9-215ENST00000565442 PREPP48147 710 aa8.22□□□□□ -1.09
CHD9-215ENST00000565442 FKBP5Q13451 457 aaPredicted RBP8.22□□□□□ -1.09
CHD9-215ENST00000565442 SEC31BQ9NQW1 1179 aa8.22□□□□□ -1.09
CHD9-215ENST00000565442 HIF3AQ9Y2N7 669 aa8.22□□□□□ -1.09
CHD9-215ENST00000565442 SCNN1AP37088 669 aa8.21□□□□□ -1.1
CHD9-215ENST00000565442 OGFOD2Q6N063 350 aa8.21□□□□□ -1.1
CHD9-215ENST00000565442 KLHDC7BQ96G42 594 aa8.21□□□□□ -1.1
CHD9-215ENST00000565442 PIM2Q9P1W9 311 aa8.21□□□□□ -1.1
CHD9-215ENST00000565442 ANGEL1Q9UNK9 670 aaKnown RBP8.21□□□□□ -1.1
CHD9-215ENST00000565442 NOVA2Q9UNW9 492 aaKnown RBP8.21□□□□□ -1.1
CHD9-215ENST00000565442 KIF4AO95239 1232 aa8.2□□□□□ -1.1
CHD9-215ENST00000565442 BRD2P25440 801 aaKnown RBP8.2□□□□□ -1.1
CHD9-215ENST00000565442 PIK3R5Q8WYR1 880 aa8.2□□□□□ -1.1
CHD9-215ENST00000565442 MFSD14AQ96MC6 490 aa8.2□□□□□ -1.1
CHD9-215ENST00000565442 TRAIPQ9BWF2 469 aa8.2□□□□□ -1.1
CHD9-215ENST00000565442 RNF208Q9H0X6 261 aa8.2□□□□□ -1.1
CHD9-215ENST00000565442 SH2B1Q9NRF2 756 aaPredicted RBP8.2□□□□□ -1.1
CHD9-215ENST00000565442 ZMIZ1Q9ULJ6 1067 aa8.2□□□□□ -1.1
CHD9-215ENST00000565442 FAM177BA6PVY3 158 aa8.19□□□□□ -1.1
CHD9-215ENST00000565442 PTPRAP18433 802 aa8.19□□□□□ -1.1
CHD9-215ENST00000565442 TTC39BQ5VTQ0 682 aaPredicted RBP8.19□□□□□ -1.1
CHD9-215ENST00000565442 FAM200AQ8TCP9 573 aa8.19□□□□□ -1.1
CHD9-215ENST00000565442 STK32AQ8WU08 396 aa8.19□□□□□ -1.1
CHD9-215ENST00000565442 KRTAP4-9Q9BYQ8 210 aa8.19□□□□□ -1.1
CHD9-215ENST00000565442 PBX4Q9BYU1 374 aa8.19□□□□□ -1.1
CHD9-215ENST00000565442 FAM13BQ9NYF5 915 aa8.19□□□□□ -1.1
CHD9-215ENST00000565442 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
CHD9-215ENST00000565442 ELOAQ14241 798 aaKnown RBP8.18□□□□□ -1.1
CHD9-215ENST00000565442 FAM26DQ5JW98 314 aa8.18□□□□□ -1.1
CHD9-215ENST00000565442 GIMAP7Q8NHV1 300 aa8.18□□□□□ -1.1
CHD9-215ENST00000565442 COL26A1Q96A83 441 aa8.18□□□□□ -1.1
CHD9-215ENST00000565442 ADAM19Q9H013 955 aa8.18□□□□□ -1.1
CHD9-215ENST00000565442 USTQ9Y2C2 406 aa8.18□□□□□ -1.1
CHD9-215ENST00000565442 H3BRJ5 948 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 PIP4K2BP78356 416 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 PDE4CQ08493 712 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 MSMPQ1L6U9 139 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 TMEM164Q5U3C3 297 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 C16orf46Q6P387 395 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 FDX2Q6P4F2 183 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 WNT8BQ93098 351 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 RUSC1Q9BVN2 902 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 SAP130Q9H0E3 1048 aa8.17□□□□□ -1.1
CHD9-215ENST00000565442 FNDC3AQ9Y2H6 1198 aaKnown RBP8.17□□□□□ -1.1
CHD9-215ENST00000565442 TMEM88BA6NKF7 163 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 GAS2O43903 313 aaKnown RBP8.16□□□□□ -1.1
CHD9-215ENST00000565442 CBLL1Q75N03 491 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 AEBP1Q8IUX7 1158 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 CEP120Q8N960 986 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
CHD9-215ENST00000565442 OSGEPQ9NPF4 335 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 ATG3Q9NT62 314 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 ABI2Q9NYB9 513 aaPredicted RBP8.16□□□□□ -1.1
CHD9-215ENST00000565442 CCDC39Q9UFE4 941 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 LEMD3Q9Y2U8 911 aa8.16□□□□□ -1.1
CHD9-215ENST00000565442 CYP2E1P05181 493 aaPredicted RBP8.15□□□□□ -1.1
CHD9-215ENST00000565442 C8AP07357 584 aa8.15□□□□□ -1.1
CHD9-215ENST00000565442 MAP4P27816 1152 aaKnown RBP8.15□□□□□ -1.1
CHD9-215ENST00000565442 CABP4P57796 275 aa8.15□□□□□ -1.1
CHD9-215ENST00000565442 NLRP12P59046 1061 aa8.15□□□□□ -1.1
CHD9-215ENST00000565442 NCAPG2Q86XI2 1143 aa8.15□□□□□ -1.1
CHD9-215ENST00000565442 POU5F2Q8N7G0 328 aa8.15□□□□□ -1.1
CHD9-215ENST00000565442 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
CHD9-215ENST00000565442 F13BP05160 661 aa8.14□□□□□ -1.11
CHD9-215ENST00000565442 FOSL1P15407 271 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms