RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 PPP2R5EQ16537 467 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 METTL24Q5JXM2 366 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA6AQ9NYA3 693 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 GIPC1O14908 333 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 SLC4A8Q2Y0W8 1093 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CRACR2BQ8N4Y2 399 aaPredicted RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 CCT6BQ92526 530 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 KIFAP3Q92845 792 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CDCA7LQ96GN5 454 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CNNM2Q9H8M5 875 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 NCOA2Q15596 1464 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 PHACTR2O75167 634 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 TMEM57Q8N5G2 664 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 ABCF2Q9UG63 623 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 TSKSQ9UJT2 592 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 PPP2R3AQ06190 1150 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 ZNF444Q8N0Y2 327 aaPredicted RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 NEK11Q8NG66 645 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 WHAMMQ8TF30 809 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CCDC42Q96M95 316 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 TTF2Q9UNY4 1162 aaKnown RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 IDEP14735 1019 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CHMP4BP1P59074 171 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 SPTY2D1Q68D10 685 aaPredicted RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 ZNF526Q8TF50 670 aaPredicted RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 PSMD1Q99460 953 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 MAK16Q9BXY0 300 aaKnown RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 GGNBP2Q9H3C7 697 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 FAM135AQ9P2D6 1515 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CALML3P27482 149 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 AMOTQ4VCS5 1084 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 RLBP1P12271 317 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 HSPA1LP34931 641 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 COG7P83436 770 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 PLCB3Q01970 1234 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 SLFN5Q08AF3 891 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 ZNF530Q6P9A1 599 aaPredicted RBP5.73□□□□□ -1.49
SMG1-211ENST00000565324 CABS1Q96KC9 395 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 TBC1D32Q96NH3 1257 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 PARP2Q9UGN5 583 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 GUCA1BQ9UMX6 200 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 MAP3K7CLP57077 242 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 ITIH3Q06033 890 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 RILPL1Q5EBL4 403 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 TMEM67Q5HYA8 995 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 RASEFQ8IZ41 740 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 AOPEPQ8N6M6 819 aa5.73□□□□□ -1.49
SMG1-211ENST00000565324 CECR2Q9BXF3 1484 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 CASKIN1Q8WXD9 1431 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 UBXN1Q04323 297 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 GNAT3A8MTJ3 354 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 GNAQP50148 359 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 MUM1Q2TAK8 710 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 CCDC186Q7Z3E2 898 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 NAPGQ99747 312 aaPredicted RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 DRC3Q9H069 523 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 ERCC3P19447 782 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 NFE2L2Q16236 605 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 TBC1D9Q6ZT07 1266 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 NCOA7Q8NI08 942 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 KIAA1107Q9UPP5 1409 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 WDR97A6NE52 1622 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 STK10O94804 968 aaKnown RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 IQCDQ96DY2 449 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 PPFIA4O75335 1185 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 PTGS1P23219 599 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 IFIT5Q13325 482 aaKnown RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 RSPH3Q86UC2 560 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 TSR2Q969E8 191 aaKnown RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 HPDP32754 393 aaPredicted RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 MFSD6Q6ZSS7 791 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 BANK1Q8NDB2 785 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 ELP1O95163 1332 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 TIAM1Q13009 1591 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 UNC13AQ9UPW8 1703 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 RUFY3Q7L099 469 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 RALGAPBQ86X10 1494 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 MYRIPQ8NFW9 859 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 HOMER3Q9NSC5 361 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 EVI5O60447 810 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 ERCC5P28715 1186 aaPredicted RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 NRBF2Q96F24 287 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 RANBP6O60518 1105 aaKnown RBP5.72□□□□□ -1.49
SMG1-211ENST00000565324 RHOXF2BP0C7M4 288 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 EVCP57679 992 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 RHOXF2Q9BQY4 288 aa5.72□□□□□ -1.49
SMG1-211ENST00000565324 RRAGBQ5VZM2 374 aa5.71□□□□□ -1.49
SMG1-211ENST00000565324 GSDMBQ8TAX9 411 aa5.71□□□□□ -1.49
SMG1-211ENST00000565324 GTF3C6Q969F1 213 aa5.71□□□□□ -1.49
SMG1-211ENST00000565324 RNF216Q9NWF9 866 aaPredicted RBP5.71□□□□□ -1.49
SMG1-211ENST00000565324 GOLGA6BA6NDN3 693 aa5.71□□□□□ -1.49
SMG1-211ENST00000565324 KRT23Q9C075 422 aa5.71□□□□□ -1.49
SMG1-211ENST00000565324 NPHP3Q7Z494 1330 aa5.71□□□□□ -1.49
SMG1-211ENST00000565324 SNX21Q969T3 373 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 TROVE2P10155 538 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMG1-211ENST00000565324 LGSNQ5TDP6 509 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
SMG1-211ENST00000565324 BAG1Q99933 345 aaPredicted RBP5.71□□□□□ -1.5
SMG1-211ENST00000565324 PTPRGP23470 1445 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms