RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 PAXIP1Q6ZW49 1069 aaPredicted RBP20.13■□□□□ 0.81
THUMPD1-203ENST00000565248 PSMD1Q99460 953 aa20.13■□□□□ 0.81
THUMPD1-203ENST00000565248 SIL1Q9H173 461 aa20.13■□□□□ 0.81
THUMPD1-203ENST00000565248 LAMB2P55268 1798 aa20.13■□□□□ 0.81
THUMPD1-203ENST00000565248 SMARCA5O60264 1052 aaPredicted RBP20.12■□□□□ 0.81
THUMPD1-203ENST00000565248 GRIPAP1Q4V328 841 aa20.12■□□□□ 0.81
THUMPD1-203ENST00000565248 SKAP1Q86WV1 359 aa20.12■□□□□ 0.81
THUMPD1-203ENST00000565248 CLASRPQ8N2M8 674 aaKnown RBP20.12■□□□□ 0.81
THUMPD1-203ENST00000565248 GJA3Q9Y6H8 435 aa20.12■□□□□ 0.81
THUMPD1-203ENST00000565248 RTL9Q8NET4 1388 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 CCDC85CA6NKD9 419 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 CIAO1O76071 339 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 ITGA6P23229 1130 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 PDE4AP27815 886 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 IL15P40933 162 aaPredicted RBP20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 CAPNS2Q96L46 248 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 NLRP3Q96P20 1036 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 BCL11AQ9H165 835 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 GREM2Q9H772 168 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 MYH3P11055 1940 aa20.11■□□□□ 0.81
THUMPD1-203ENST00000565248 EYA2O00167 538 aa20.1■□□□□ 0.81
THUMPD1-203ENST00000565248 MLLT1Q03111 559 aaPredicted RBP20.1■□□□□ 0.81
THUMPD1-203ENST00000565248 KLHDC4Q8TBB5 520 aa20.1■□□□□ 0.81
THUMPD1-203ENST00000565248 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
THUMPD1-203ENST00000565248 CCDC85AQ96PX6 553 aaPredicted RBP20.1■□□□□ 0.81
THUMPD1-203ENST00000565248 GRM1Q13255 1194 aa20.09■□□□□ 0.81
THUMPD1-203ENST00000565248 SF3B3Q15393 1217 aaKnown RBP20.09■□□□□ 0.81
THUMPD1-203ENST00000565248 CDC5LQ99459 802 aaKnown RBP20.09■□□□□ 0.81
THUMPD1-203ENST00000565248 IL1RAPL2Q9NP60 686 aa20.09■□□□□ 0.81
THUMPD1-203ENST00000565248 RIC1Q4ADV7 1423 aa20.09■□□□□ 0.81
THUMPD1-203ENST00000565248 ABCC12Q96J65 1359 aa20.08■□□□□ 0.81
THUMPD1-203ENST00000565248 DDX60Q8IY21 1712 aaKnown RBP20.08■□□□□ 0.81
THUMPD1-203ENST00000565248 TRPM7Q96QT4 1865 aa20.08■□□□□ 0.81
THUMPD1-203ENST00000565248 GPATCH3Q96I76 525 aa20.08■□□□□ 0.81
THUMPD1-203ENST00000565248 IFIT2P09913 472 aaKnown RBP20.07■□□□□ 0.8
THUMPD1-203ENST00000565248 IGHMBP2P38935 993 aaKnown RBP20.07■□□□□ 0.8
THUMPD1-203ENST00000565248 LDHAL6AQ6ZMR3 332 aa20.07■□□□□ 0.8
THUMPD1-203ENST00000565248 USP50Q70EL3 339 aaPredicted RBP20.07■□□□□ 0.8
THUMPD1-203ENST00000565248 LARGE2Q8N3Y3 721 aa20.07■□□□□ 0.8
THUMPD1-203ENST00000565248 RPGRQ92834 1020 aaKnown RBP20.07■□□□□ 0.8
THUMPD1-203ENST00000565248 CNNM1Q9NRU3 951 aa20.07■□□□□ 0.8
THUMPD1-203ENST00000565248 CRY2Q49AN0 593 aa20.06■□□□□ 0.8
THUMPD1-203ENST00000565248 CYP4F22Q6NT55 531 aa20.06■□□□□ 0.8
THUMPD1-203ENST00000565248 PLEKHM2Q8IWE5 1019 aa20.06■□□□□ 0.8
THUMPD1-203ENST00000565248 ZNF594Q96JF6 807 aaPredicted RBP20.06■□□□□ 0.8
THUMPD1-203ENST00000565248 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
THUMPD1-203ENST00000565248 TMX4Q9H1E5 349 aaPredicted RBP20.06■□□□□ 0.8
THUMPD1-203ENST00000565248 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
THUMPD1-203ENST00000565248 THSD7BQ9C0I4 1608 aa20.05■□□□□ 0.8
THUMPD1-203ENST00000565248 SASH1O94885 1247 aa20.05■□□□□ 0.8
THUMPD1-203ENST00000565248 MX1P20591 662 aa20.05■□□□□ 0.8
THUMPD1-203ENST00000565248 MAP2K2P36507 400 aa20.05■□□□□ 0.8
THUMPD1-203ENST00000565248 EPS15P42566 896 aa20.05■□□□□ 0.8
THUMPD1-203ENST00000565248 GPR108Q9NPR9 543 aa20.05■□□□□ 0.8
THUMPD1-203ENST00000565248 AOX1Q06278 1338 aa20.04■□□□□ 0.8
THUMPD1-203ENST00000565248 RGS19P49795 217 aa20.04■□□□□ 0.8
THUMPD1-203ENST00000565248 TFCP2Q12800 502 aa20.04■□□□□ 0.8
THUMPD1-203ENST00000565248 ATG9AQ7Z3C6 839 aa20.04■□□□□ 0.8
THUMPD1-203ENST00000565248 AACSQ86V21 672 aa20.04■□□□□ 0.8
THUMPD1-203ENST00000565248 NIM1KQ8IY84 436 aa20.04■□□□□ 0.8
THUMPD1-203ENST00000565248 CA12O43570 354 aa20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 SCNN1DP51172 638 aa20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 DDX46Q7L014 1031 aaKnown RBP20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 ANKRD18AQ8IVF6 992 aa20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 RBM17Q96I25 401 aaKnown RBP20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 OSBPL3Q9H4L5 887 aa20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 AKAP2Q9Y2D5 859 aa20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 TLL2Q9Y6L7 1015 aa20.03■□□□□ 0.8
THUMPD1-203ENST00000565248 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 PDE1AP54750 535 aa20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 LRRC24Q50LG9 513 aa20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 BMP2KLQ5H9B9 411 aa20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 METTL24Q5JXM2 366 aa20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 CST9Q5W186 159 aa20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 PUS3Q9BZE2 481 aaKnown RBP20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 STAP2Q9UGK3 403 aa20.02■□□□□ 0.8
THUMPD1-203ENST00000565248 LTBP1Q14766 1721 aa20.02■□□□□ 0.79
THUMPD1-203ENST00000565248 SNED1Q8TER0 1413 aa20.02■□□□□ 0.79
THUMPD1-203ENST00000565248 ERC2O15083 957 aa20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 FMR1Q06787 632 aaKnown RBP eCLIP20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 TNNI3KQ59H18 835 aa20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 OTUD7AQ8TE49 926 aaPredicted RBP20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 CRAMP1Q96RY5 1269 aa20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 SEC31BQ9NQW1 1179 aa20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 PCDH10Q9P2E7 1040 aa20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 FPGT-TNNI3KV9GXZ4 949 aa20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 TTC41PQ6P2S7 1318 aa20.01■□□□□ 0.79
THUMPD1-203ENST00000565248 TRAF5O00463 557 aa20■□□□□ 0.79
THUMPD1-203ENST00000565248 PPEF1O14829 653 aaPredicted RBP20■□□□□ 0.79
THUMPD1-203ENST00000565248 TTC22Q5TAA0 569 aa20■□□□□ 0.79
THUMPD1-203ENST00000565248 C3orf67Q6ZVT6 689 aa20■□□□□ 0.79
THUMPD1-203ENST00000565248 VPS33BQ9H267 617 aa20■□□□□ 0.79
THUMPD1-203ENST00000565248 ADARB2Q9NS39 739 aaKnown RBP20■□□□□ 0.79
THUMPD1-203ENST00000565248 RIPOR2Q9Y4F9 1068 aa20■□□□□ 0.79
THUMPD1-203ENST00000565248 SALL3Q9BXA9 1300 aa20■□□□□ 0.79
THUMPD1-203ENST00000565248 EAF2Q96CJ1 260 aaPredicted RBP19.99■□□□□ 0.79
THUMPD1-203ENST00000565248 ECHDC1Q9NTX5 307 aa19.99■□□□□ 0.79
THUMPD1-203ENST00000565248 COL4A5P29400 1685 aa19.99■□□□□ 0.79
THUMPD1-203ENST00000565248 PPIP5K2O43314 1243 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms