RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 VIL1P09327 827 aaKnown RBP17.17■□□□□ 0.34
PKD1-228ENST00000564865 RFX5P48382 616 aaPredicted RBP17.17■□□□□ 0.34
PKD1-228ENST00000564865 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
PKD1-228ENST00000564865 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
PKD1-228ENST00000564865 MICALL2Q8IY33 904 aa17.17■□□□□ 0.34
PKD1-228ENST00000564865 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
PKD1-228ENST00000564865 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
PKD1-228ENST00000564865 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
PKD1-228ENST00000564865 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
PKD1-228ENST00000564865 DPF2Q92785 391 aa17.16■□□□□ 0.34
PKD1-228ENST00000564865 RPS12P25398 132 aaKnown RBP17.15■□□□□ 0.34
PKD1-228ENST00000564865 APLP1P51693 650 aa17.15■□□□□ 0.34
PKD1-228ENST00000564865 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
PKD1-228ENST00000564865 UBE4AQ14139 1066 aa17.15■□□□□ 0.34
PKD1-228ENST00000564865 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
PKD1-228ENST00000564865 MAP1SQ66K74 1059 aaPredicted RBP17.15■□□□□ 0.34
PKD1-228ENST00000564865 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
PKD1-228ENST00000564865 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
PKD1-228ENST00000564865 SIL1Q9H173 461 aa17.15■□□□□ 0.34
PKD1-228ENST00000564865 CD209Q9NNX6 404 aa17.15■□□□□ 0.34
PKD1-228ENST00000564865 RCAN3Q9UKA8 241 aa17.15■□□□□ 0.34
PKD1-228ENST00000564865 EYA2O00167 538 aa17.14■□□□□ 0.33
PKD1-228ENST00000564865 GNAI2P04899 355 aa17.14■□□□□ 0.33
PKD1-228ENST00000564865 RLBP1P12271 317 aa17.14■□□□□ 0.33
PKD1-228ENST00000564865 C15orf52Q6ZUT6 534 aaKnown RBP17.14■□□□□ 0.33
PKD1-228ENST00000564865 SAMD7Q7Z3H4 446 aa17.14■□□□□ 0.33
PKD1-228ENST00000564865 ZNF804AQ7Z570 1209 aa17.14■□□□□ 0.33
PKD1-228ENST00000564865 MXD3Q9BW11 206 aa17.14■□□□□ 0.33
PKD1-228ENST00000564865 HTRA3P83110 453 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
PKD1-228ENST00000564865 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 CNTROBQ8N137 903 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
PKD1-228ENST00000564865 IRS2Q9Y4H2 1338 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
PKD1-228ENST00000564865 A0A1B0GUL6 1792 aa17.12■□□□□ 0.33
PKD1-228ENST00000564865 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
PKD1-228ENST00000564865 PDE8BO95263 885 aa17.12■□□□□ 0.33
PKD1-228ENST00000564865 GYG1P46976 350 aa17.12■□□□□ 0.33
PKD1-228ENST00000564865 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
PKD1-228ENST00000564865 GTF2IP78347 998 aa17.12■□□□□ 0.33
PKD1-228ENST00000564865 DACT2Q5SW24 774 aa17.12■□□□□ 0.33
PKD1-228ENST00000564865 STRIP1Q5VSL9 837 aa17.12■□□□□ 0.33
PKD1-228ENST00000564865 ADAMTSL1Q8N6G6 1762 aa17.11■□□□□ 0.33
PKD1-228ENST00000564865 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
PKD1-228ENST00000564865 ATG9AQ7Z3C6 839 aa17.11■□□□□ 0.33
PKD1-228ENST00000564865 VGLL2Q8N8G2 317 aa17.11■□□□□ 0.33
PKD1-228ENST00000564865 ZBTB7BO15156 539 aaPredicted RBP17.1■□□□□ 0.33
PKD1-228ENST00000564865 EGFRP00533 1210 aa17.1■□□□□ 0.33
PKD1-228ENST00000564865 USP17L8P0C7I0 530 aa17.1■□□□□ 0.33
PKD1-228ENST00000564865 MS4A1P11836 297 aa17.1■□□□□ 0.33
PKD1-228ENST00000564865 IL1R1P14778 569 aa17.1■□□□□ 0.33
PKD1-228ENST00000564865 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
PKD1-228ENST00000564865 FAM84BQ96KN1 310 aaPredicted RBP17.1■□□□□ 0.33
PKD1-228ENST00000564865 GMLQ99445 158 aa17.1■□□□□ 0.33
PKD1-228ENST00000564865 C1orf115Q9H7X2 142 aa17.1■□□□□ 0.33
PKD1-228ENST00000564865 COPRSQ9NQ92 184 aa17.1■□□□□ 0.33
PKD1-228ENST00000564865 CIAO1O76071 339 aa17.09■□□□□ 0.33
PKD1-228ENST00000564865 MTX1Q13505 466 aa17.09■□□□□ 0.33
PKD1-228ENST00000564865 VPS37DQ86XT2 251 aa17.09■□□□□ 0.33
PKD1-228ENST00000564865 CEP126Q9P2H0 1117 aa17.09■□□□□ 0.33
PKD1-228ENST00000564865 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
PKD1-228ENST00000564865 JAG2Q9Y219 1238 aa17.09■□□□□ 0.33
PKD1-228ENST00000564865 PASKQ96RG2 1323 aa17.09■□□□□ 0.33
PKD1-228ENST00000564865 MYO3BQ8WXR4 1341 aa17.08■□□□□ 0.32
PKD1-228ENST00000564865 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
PKD1-228ENST00000564865 ZNF280AP59817 542 aaPredicted RBP17.08■□□□□ 0.32
PKD1-228ENST00000564865 PUM3Q15397 648 aaKnown RBP17.08■□□□□ 0.32
PKD1-228ENST00000564865 KIF4BQ2VIQ3 1234 aa17.08■□□□□ 0.32
PKD1-228ENST00000564865 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.32
PKD1-228ENST00000564865 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.32
PKD1-228ENST00000564865 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
PKD1-228ENST00000564865 IFIT1P09914 478 aaKnown RBP17.07■□□□□ 0.32
PKD1-228ENST00000564865 SLC5A1P13866 664 aa17.07■□□□□ 0.32
PKD1-228ENST00000564865 FGFR2P21802 821 aa17.07■□□□□ 0.32
PKD1-228ENST00000564865 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
PKD1-228ENST00000564865 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
PKD1-228ENST00000564865 OGFOD1Q8N543 542 aa17.07■□□□□ 0.32
PKD1-228ENST00000564865 MYOZ2Q9NPC6 264 aa17.07■□□□□ 0.32
PKD1-228ENST00000564865 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
PKD1-228ENST00000564865 IQSEC3Q9UPP2 1182 aaPredicted RBP17.07■□□□□ 0.32
PKD1-228ENST00000564865 ZNF609O15014 1411 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 PSME4Q14997 1843 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 TRAF5O00463 557 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
PKD1-228ENST00000564865 SASH1O94885 1247 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 BCAMP50895 628 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 FBXO33Q7Z6M2 555 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
PKD1-228ENST00000564865 LPIN2Q92539 896 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 GLIS2Q9BZE0 524 aaPredicted RBP17.06■□□□□ 0.32
PKD1-228ENST00000564865 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 COG6Q9Y2V7 657 aa17.06■□□□□ 0.32
PKD1-228ENST00000564865 F8W031 263 aaPredicted RBP17.05■□□□□ 0.32
PKD1-228ENST00000564865 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
PKD1-228ENST00000564865 G3BP1Q13283 466 aaKnown RBP eCLIP17.05■□□□□ 0.32
PKD1-228ENST00000564865 SCARF1Q14162 830 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms