RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TDRD7Q8NHU6 1098 aaKnown RBP8.94□□□□□ -0.98
ATXN3-249ENST00000564606 KCNG4Q8TDN1 519 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 LEO1Q8WVC0 666 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-249ENST00000564606 FUCA2Q9BTY2 467 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 TRIM5Q9C035 493 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 GDPD2Q9HCC8 539 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 CEP126Q9P2H0 1117 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 PA2G4Q9UQ80 394 aaKnown RBP8.94□□□□□ -0.98
ATXN3-249ENST00000564606 TMEM94Q12767 1356 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 C1orf167Q5SNV9 1468 aa8.94□□□□□ -0.98
ATXN3-249ENST00000564606 SMTNL1A8MU46 457 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 MYL6BP14649 208 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 ZNF165P49910 485 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 SF3A1Q15459 793 aaKnown RBP8.93□□□□□ -0.98
ATXN3-249ENST00000564606 ADCK5Q3MIX3 580 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 FOXD4L6Q3SYB3 417 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-249ENST00000564606 TMED8Q6PL24 325 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-249ENST00000564606 SARM1Q6SZW1 724 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 FOXD4L3Q6VB84 417 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-249ENST00000564606 Q6ZUG5 572 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 SMARCC2Q8TAQ2 1214 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 SIL1Q9H173 461 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 PAG1Q9NWQ8 432 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 FAM13BQ9NYF5 915 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 IMPACTQ9P2X3 320 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 NSFL1CQ9UNZ2 370 aaKnown RBP8.93□□□□□ -0.98
ATXN3-249ENST00000564606 CPDO75976 1380 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 SPEF2Q9C093 1822 aa8.93□□□□□ -0.98
ATXN3-249ENST00000564606 A0A0D9SFI3 127 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 A0A1W2PQ27 194 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 A0A1W2PQ64 194 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 A0A1W2PQD8 194 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 H7C1W4 665 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 RNF113AO15541 343 aaKnown RBP8.92□□□□□ -0.98
ATXN3-249ENST00000564606 KCNQ3O43525 872 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
ATXN3-249ENST00000564606 PTPN12Q05209 780 aaKnown RBP8.92□□□□□ -0.98
ATXN3-249ENST00000564606 PDIA6Q15084 440 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 CCDC57Q2TAC2 916 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 GIMAP6Q6P9H5 292 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 SYNE3Q6ZMZ3 975 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 RALYLQ86SE5 291 aaKnown RBP8.92□□□□□ -0.98
ATXN3-249ENST00000564606 NFATC2IPQ8NCF5 419 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 WASF1Q92558 559 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 FAM227BQ96M60 508 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
ATXN3-249ENST00000564606 DACT1Q9NYF0 836 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 RCOR1Q9UKL0 485 aa8.92□□□□□ -0.98
ATXN3-249ENST00000564606 POTEFA5A3E0 1075 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 EYA2O00167 538 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 CPLX1O14810 134 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 SEMA3EO15041 775 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 CBFA2T2O43439 604 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 YEATS4O95619 227 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 ANXA1P04083 346 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 FAM160A1Q05DH4 1040 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 TFCP2Q12800 502 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 TRIM28Q13263 835 aaKnown RBP8.91□□□□□ -0.98
ATXN3-249ENST00000564606 TOB2Q14106 344 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-249ENST00000564606 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 KIF6Q6ZMV9 814 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.91□□□□□ -0.98
ATXN3-249ENST00000564606 UBE3BQ7Z3V4 1068 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 KIAA1524Q8TCG1 905 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 NEUROD6Q96NK8 337 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 AGXT2Q9BYV1 514 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.91□□□□□ -0.98
ATXN3-249ENST00000564606 CHMP3Q9Y3E7 222 aa8.91□□□□□ -0.98
ATXN3-249ENST00000564606 SIPA1L3O60292 1781 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-249ENST00000564606 TNS3Q68CZ2 1445 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 RFX5P48382 616 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-249ENST00000564606 FAM193AP78312 1265 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 RESTQ13127 1097 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 TRIM29Q14134 588 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 PROSER3Q2NL68 480 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 ANO6Q4KMQ2 910 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 TTC39AQ5SRH9 613 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 ADALQ6DHV7 355 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 LMBR1LQ6UX01 489 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 CDC37L1Q7L3B6 337 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 NECAB1Q8N987 351 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 CCDC150Q8NCX0 1101 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 NCOA7Q8NI08 942 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
ATXN3-249ENST00000564606 MRPS27Q92552 414 aaKnown RBP8.9□□□□□ -0.98
ATXN3-249ENST00000564606 ARHGEF1Q92888 912 aaKnown RBP8.9□□□□□ -0.98
ATXN3-249ENST00000564606 BRF1Q92994 677 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 ZNF496Q96IT1 587 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-249ENST00000564606 ORAI2Q96SN7 254 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 FEZ1Q99689 392 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 BPIFA3Q9BQP9 254 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 CCDC94Q9BW85 323 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-249ENST00000564606 IL25Q9H293 177 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 CLIP2Q9UDT6 1046 aa8.9□□□□□ -0.98
ATXN3-249ENST00000564606 DBNLQ9UJU6 430 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms