RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ZFATQ9P243 1243 aa6.27□□□□□ -1.41
CAPN3-212ENST00000564503 KIAA0556O60303 1618 aa6.27□□□□□ -1.41
CAPN3-212ENST00000564503 ROCK2O75116 1388 aaKnown RBP6.27□□□□□ -1.41
CAPN3-212ENST00000564503 DHX29Q7Z478 1369 aaKnown RBP6.27□□□□□ -1.41
CAPN3-212ENST00000564503 ARHGEF12Q9NZN5 1544 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 SASH3O75995 380 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 ATG7O95352 703 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 APBA3O96018 575 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 GATA4P43694 442 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 DOC2BQ14184 412 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 TRAPPC3LQ5T215 181 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 PSAPL1Q6NUJ1 521 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 KRT25Q7Z3Z0 450 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 JPH1Q9HDC5 661 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-212ENST00000564503 USP20Q9Y2K6 914 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 RTCBQ9Y3I0 505 aaKnown RBP6.26□□□□□ -1.41
CAPN3-212ENST00000564503 KTN1Q86UP2 1357 aaKnown RBP6.26□□□□□ -1.41
CAPN3-212ENST00000564503 PZPP20742 1482 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 RALGAPBQ86X10 1494 aa6.26□□□□□ -1.41
CAPN3-212ENST00000564503 ZBTB42B2RXF5 422 aa6.25□□□□□ -1.41
CAPN3-212ENST00000564503 GRIK4Q16099 956 aa6.25□□□□□ -1.41
CAPN3-212ENST00000564503 NBPF8Q3BBV2 869 aa6.25□□□□□ -1.41
CAPN3-212ENST00000564503 TREML1Q86YW5 311 aa6.25□□□□□ -1.41
CAPN3-212ENST00000564503 SAP130Q9H0E3 1048 aa6.25□□□□□ -1.41
CAPN3-212ENST00000564503 NAGPAQ9UK23 515 aa6.25□□□□□ -1.41
CAPN3-212ENST00000564503 ADGRL2O95490 1459 aa6.25□□□□□ -1.41
CAPN3-212ENST00000564503 TCERG1O14776 1098 aaKnown RBP6.24□□□□□ -1.41
CAPN3-212ENST00000564503 EIF5BO60841 1220 aaKnown RBP6.24□□□□□ -1.41
CAPN3-212ENST00000564503 RGS9O75916 674 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-212ENST00000564503 RARAP10276 462 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 AFF1P51825 1210 aaKnown RBP6.24□□□□□ -1.41
CAPN3-212ENST00000564503 PCSK7Q16549 785 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 DHX32Q7L7V1 743 aaKnown RBP6.24□□□□□ -1.41
CAPN3-212ENST00000564503 FAM35AQ86V20 835 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 CMTR1Q8N1G2 835 aaKnown RBP6.24□□□□□ -1.41
CAPN3-212ENST00000564503 TRPM4Q8TD43 1214 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 USP35Q9P2H5 1018 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 ZMYM4Q5VZL5 1548 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 KDM5DQ9BY66 1539 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 ABCC5O15440 1437 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 UHRF1BP1Q6BDS2 1440 aa6.24□□□□□ -1.41
CAPN3-212ENST00000564503 BRD4O60885 1362 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-212ENST00000564503 LRPPRCP42704 1394 aaKnown RBP6.23□□□□□ -1.41
CAPN3-212ENST00000564503 KIF15Q9NS87 1388 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 A0A0A0MRY4 1105 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 PPM1GO15355 546 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-212ENST00000564503 CPB1P15086 417 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 TMEM164Q5U3C3 297 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 CAPN12Q6ZSI9 719 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 ILDR2Q71H61 639 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 RGL4Q8IZJ4 473 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 COL26A1Q96A83 441 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 CXXC1Q9P0U4 656 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-212ENST00000564503 KIAA1107Q9UPP5 1409 aa6.23□□□□□ -1.41
CAPN3-212ENST00000564503 CAMSAP2Q08AD1 1489 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 PLEKHH2Q8IVE3 1493 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 USP47Q96K76 1375 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 EIF2AK4Q9P2K8 1649 aaKnown RBP6.22□□□□□ -1.41
CAPN3-212ENST00000564503 XYLBO75191 536 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 EGFRP00533 1210 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 BRD2P25440 801 aaKnown RBP6.22□□□□□ -1.41
CAPN3-212ENST00000564503 MLLT1Q03111 559 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-212ENST00000564503 PERM1Q5SV97 790 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 C16orf46Q6P387 395 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 ETFBKMTQ8IXQ9 262 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 DMRTC2Q8IXT2 367 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-212ENST00000564503 CCDC97Q96F63 343 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-212ENST00000564503 NACC1Q96RE7 527 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 KCNMB2Q9Y691 235 aa6.22□□□□□ -1.41
CAPN3-212ENST00000564503 ELNP15502 786 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 RAC1P63000 192 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 GPLD1P80108 840 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 PLAURQ03405 335 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 NAA30Q147X3 362 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-212ENST00000564503 GRIK5Q16478 980 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 FAM26DQ5JW98 314 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 PBXIP1Q96AQ6 731 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 LPIN3Q9BQK8 851 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 MKNK1Q9BUB5 465 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 TLR7Q9NYK1 1049 aaKnown RBP6.21□□□□□ -1.42
CAPN3-212ENST00000564503 FRRS1LQ9P0K9 344 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 SERPINA10Q9UK55 444 aa6.21□□□□□ -1.42
CAPN3-212ENST00000564503 RNF17Q9BXT8 1623 aaKnown RBP6.21□□□□□ -1.42
CAPN3-212ENST00000564503 EIF4G3O43432 1585 aaKnown RBP6.2□□□□□ -1.42
CAPN3-212ENST00000564503 ARID3CA6NKF2 412 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 C9orf172C9J069 976 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 TNFRSF10BO14763 440 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 SELPP16109 830 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 ARID4AP29374 1257 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-212ENST00000564503 NRLP54845 237 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 RRP1P56182 461 aaKnown RBP6.2□□□□□ -1.42
CAPN3-212ENST00000564503 PDE3BQ13370 1112 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 ELMSAN1Q6PJG2 1045 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 HFE2Q6ZVN8 426 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 PNISRQ8TF01 805 aaKnown RBP6.2□□□□□ -1.42
CAPN3-212ENST00000564503 TTC9Q92623 222 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 CLP1Q92989 425 aaKnown RBP6.2□□□□□ -1.42
CAPN3-212ENST00000564503 SEMA6BQ9H3T3 888 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 TPSG1Q9NRR2 321 aa6.2□□□□□ -1.42
CAPN3-212ENST00000564503 SLAIN2Q9P270 581 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms