RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 ANKRD18BA2A2Z9 1011 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 ADM5C9JUS6 153 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 VAMP4O75379 141 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 MMP14P50281 582 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
CLN6-203ENST00000563917 SCARF1Q14162 830 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 TAF7LQ5H9L4 462 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 RGMBQ6NW40 437 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 MYOZ2Q9NPC6 264 aa12.14□□□□□ -0.47
CLN6-203ENST00000563917 CACNA1FO60840 1977 aa12.13□□□□□ -0.47
CLN6-203ENST00000563917 EGFRP00533 1210 aa12.13□□□□□ -0.47
CLN6-203ENST00000563917 NF2P35240 595 aa12.13□□□□□ -0.47
CLN6-203ENST00000563917 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
CLN6-203ENST00000563917 IFIT5Q13325 482 aaKnown RBP12.13□□□□□ -0.47
CLN6-203ENST00000563917 ANGEL2Q5VTE6 544 aaKnown RBP12.13□□□□□ -0.47
CLN6-203ENST00000563917 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
CLN6-203ENST00000563917 COL4A1P02462 1669 aa12.13□□□□□ -0.47
CLN6-203ENST00000563917 ZNF804BA4D1E1 1349 aa12.12□□□□□ -0.47
CLN6-203ENST00000563917 ZNF609O15014 1411 aa12.12□□□□□ -0.47
CLN6-203ENST00000563917 THSD7BQ9C0I4 1608 aa12.12□□□□□ -0.47
CLN6-203ENST00000563917 FAM161AQ3B820 660 aa12.12□□□□□ -0.47
CLN6-203ENST00000563917 STRIP1Q5VSL9 837 aa12.12□□□□□ -0.47
CLN6-203ENST00000563917 CDCA5Q96FF9 252 aa12.12□□□□□ -0.47
CLN6-203ENST00000563917 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
CLN6-203ENST00000563917 PITPNM2Q9BZ72 1349 aa12.11□□□□□ -0.47
CLN6-203ENST00000563917 CSF1RP07333 972 aa12.11□□□□□ -0.47
CLN6-203ENST00000563917 FKBP1BP68106 108 aa12.11□□□□□ -0.47
CLN6-203ENST00000563917 TTLL12Q14166 644 aaPredicted RBP12.11□□□□□ -0.47
CLN6-203ENST00000563917 CCDC57Q2TAC2 916 aa12.11□□□□□ -0.47
CLN6-203ENST00000563917 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
CLN6-203ENST00000563917 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
CLN6-203ENST00000563917 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 SPEF2Q9C093 1822 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 CHRNDQ07001 517 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 DACT2Q5SW24 774 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 DLK2Q6UY11 383 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
CLN6-203ENST00000563917 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 GMLQ99445 158 aa12.1□□□□□ -0.47
CLN6-203ENST00000563917 POLR2AP24928 1970 aaKnown RBP12.09□□□□□ -0.47
CLN6-203ENST00000563917 F6X3S4 739 aa12.09□□□□□ -0.47
CLN6-203ENST00000563917 GRM8O00222 908 aa12.09□□□□□ -0.47
CLN6-203ENST00000563917 GTF2IP78347 998 aa12.09□□□□□ -0.47
CLN6-203ENST00000563917 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
CLN6-203ENST00000563917 ZNF804AQ7Z570 1209 aa12.09□□□□□ -0.47
CLN6-203ENST00000563917 SRCIN1Q9C0H9 1055 aa12.09□□□□□ -0.47
CLN6-203ENST00000563917 CNNM1Q9NRU3 951 aa12.09□□□□□ -0.47
CLN6-203ENST00000563917 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
CLN6-203ENST00000563917 CASP7P55210 303 aa12.08□□□□□ -0.48
CLN6-203ENST00000563917 KIF23Q02241 960 aaPredicted RBP12.08□□□□□ -0.48
CLN6-203ENST00000563917 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.48
CLN6-203ENST00000563917 LDHAL6AQ6ZMR3 332 aa12.08□□□□□ -0.48
CLN6-203ENST00000563917 SAGE1Q9NXZ1 904 aa12.08□□□□□ -0.48
CLN6-203ENST00000563917 PSME4Q14997 1843 aa12.08□□□□□ -0.48
CLN6-203ENST00000563917 ASTN2O75129 1339 aaPredicted RBP12.08□□□□□ -0.48
CLN6-203ENST00000563917 WTIPA6NIX2 430 aaPredicted RBP12.07□□□□□ -0.48
CLN6-203ENST00000563917 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 WNT10BO00744 389 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 MYO1BO43795 1136 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 PLIN1O60240 522 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 SLC10A3P09131 477 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 NBPF9Q3BBW0 867 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 TXNRD3Q86VQ6 643 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 APOBEC3FQ8IUX4 373 aaKnown RBP12.07□□□□□ -0.48
CLN6-203ENST00000563917 KIAA0825Q8IV33 1275 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 CD209Q9NNX6 404 aa12.07□□□□□ -0.48
CLN6-203ENST00000563917 TAF5LO75529 589 aa12.06□□□□□ -0.48
CLN6-203ENST00000563917 FOXO4P98177 505 aa12.06□□□□□ -0.48
CLN6-203ENST00000563917 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
CLN6-203ENST00000563917 HELBQ8NG08 1087 aaPredicted RBP12.06□□□□□ -0.48
CLN6-203ENST00000563917 MXD3Q9BW11 206 aa12.06□□□□□ -0.48
CLN6-203ENST00000563917 FAM155AB1AL88 458 aaPredicted RBP12.05□□□□□ -0.48
CLN6-203ENST00000563917 TRPA1O75762 1119 aa12.05□□□□□ -0.48
CLN6-203ENST00000563917 SASH1O94885 1247 aa12.05□□□□□ -0.48
CLN6-203ENST00000563917 KLRK1P26718 216 aa12.05□□□□□ -0.48
CLN6-203ENST00000563917 DGKZQ13574 1117 aa12.05□□□□□ -0.48
CLN6-203ENST00000563917 C15orf52Q6ZUT6 534 aaKnown RBP12.05□□□□□ -0.48
CLN6-203ENST00000563917 ARMC9Q7Z3E5 817 aa12.05□□□□□ -0.48
CLN6-203ENST00000563917 ZIC5Q96T25 663 aa12.05□□□□□ -0.48
CLN6-203ENST00000563917 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
CLN6-203ENST00000563917 PAPPA2Q9BXP8 1791 aa12.05□□□□□ -0.48
CLN6-203ENST00000563917 E9PSI1 815 aa12.04□□□□□ -0.48
CLN6-203ENST00000563917 UBE2Q2LH0YL09 131 aa12.04□□□□□ -0.48
CLN6-203ENST00000563917 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLN6-203ENST00000563917 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
CLN6-203ENST00000563917 RASAL3Q86YV0 1011 aa12.04□□□□□ -0.48
CLN6-203ENST00000563917 MCOLN1Q9GZU1 580 aa12.04□□□□□ -0.48
CLN6-203ENST00000563917 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
CLN6-203ENST00000563917 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
CLN6-203ENST00000563917 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
CLN6-203ENST00000563917 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
CLN6-203ENST00000563917 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
CLN6-203ENST00000563917 SCAF8Q9UPN6 1271 aaKnown RBP12.03□□□□□ -0.48
CLN6-203ENST00000563917 AKAP11Q9UKA4 1901 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 CASP8AP2Q9UKL3 1982 aa12.02□□□□□ -0.49
CLN6-203ENST00000563917 PPP1R12BO60237 982 aaPredicted RBP12.02□□□□□ -0.49
CLN6-203ENST00000563917 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
CLN6-203ENST00000563917 IL1R1P14778 569 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms