RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 WDR87Q6ZQQ6 2873 aa14.92□□□□□ -0.02
HDGFL3-204ENST00000563790 GRK4P32298 578 aa14.92□□□□□ -0.02
HDGFL3-204ENST00000563790 NECTIN2Q92692 538 aa14.92□□□□□ -0.02
HDGFL3-204ENST00000563790 PAWRQ96IZ0 340 aaKnown RBP14.92□□□□□ -0.02
HDGFL3-204ENST00000563790 TEX13AQ9BXU3 409 aaPredicted RBP14.92□□□□□ -0.02
HDGFL3-204ENST00000563790 ARHGAP39Q9C0H5 1083 aa14.92□□□□□ -0.02
HDGFL3-204ENST00000563790 DDX60LQ5H9U9 1706 aaKnown RBP14.92□□□□□ -0.02
HDGFL3-204ENST00000563790 RTL9Q8NET4 1388 aa14.91□□□□□ -0.02
HDGFL3-204ENST00000563790 TESPA1A2RU30 521 aaPredicted RBP14.91□□□□□ -0.02
HDGFL3-204ENST00000563790 ZNF280AP59817 542 aaPredicted RBP14.91□□□□□ -0.02
HDGFL3-204ENST00000563790 TTYH1Q9H313 450 aaPredicted RBP14.91□□□□□ -0.02
HDGFL3-204ENST00000563790 SCAF8Q9UPN6 1271 aaKnown RBP14.91□□□□□ -0.02
HDGFL3-204ENST00000563790 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 EIF4A2Q14240 407 aaKnown RBP14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 NECAB2Q7Z6G3 386 aa14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 SLC10A4Q96EP9 437 aa14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 EPHX3Q9H6B9 360 aa14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 OTOFQ9HC10 1997 aa14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 ZFHX2Q9C0A1 2572 aaPredicted RBP14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 FASNP49327 2511 aaKnown RBP14.9□□□□□ -0.02
HDGFL3-204ENST00000563790 SIPA1L3O60292 1781 aaPredicted RBP14.89□□□□□ -0.03
HDGFL3-204ENST00000563790 LACTBP83111 547 aaPredicted RBP14.89□□□□□ -0.03
HDGFL3-204ENST00000563790 NHLH1Q02575 133 aa14.89□□□□□ -0.03
HDGFL3-204ENST00000563790 KIF22Q14807 665 aa14.89□□□□□ -0.03
HDGFL3-204ENST00000563790 THEGQ9P2T0 379 aa14.89□□□□□ -0.03
HDGFL3-204ENST00000563790 RIPOR2Q9Y4F9 1068 aa14.89□□□□□ -0.03
HDGFL3-204ENST00000563790 DOCK3Q8IZD9 2030 aa14.88□□□□□ -0.03
HDGFL3-204ENST00000563790 GPR37L1O60883 481 aa14.88□□□□□ -0.03
HDGFL3-204ENST00000563790 A1BGP04217 495 aa14.88□□□□□ -0.03
HDGFL3-204ENST00000563790 LGR6Q9HBX8 967 aa14.88□□□□□ -0.03
HDGFL3-204ENST00000563790 TRIOO75962 3097 aa14.88□□□□□ -0.03
HDGFL3-204ENST00000563790 HEG1Q9ULI3 1381 aa14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 RIF1Q5UIP0 2472 aaKnown RBP14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 UBXN2AP68543 259 aa14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 MRPS5P82675 430 aaKnown RBP14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 NYXQ9GZU5 481 aa14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 UNC93B1Q9H1C4 597 aa14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 ZFYVE28Q9HCC9 887 aa14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 C11orf16Q9NQ32 467 aa14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 ANGEL1Q9UNK9 670 aaKnown RBP14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 ZFHX4Q86UP3 3567 aa14.87□□□□□ -0.03
HDGFL3-204ENST00000563790 TFRCP02786 760 aaKnown RBP14.86□□□□□ -0.03
HDGFL3-204ENST00000563790 VIL1P09327 827 aaKnown RBP14.86□□□□□ -0.03
HDGFL3-204ENST00000563790 PRKG1Q13976 671 aa14.86□□□□□ -0.03
HDGFL3-204ENST00000563790 TRIM47Q96LD4 638 aa14.86□□□□□ -0.03
HDGFL3-204ENST00000563790 DBNDD1Q9H9R9 158 aa14.86□□□□□ -0.03
HDGFL3-204ENST00000563790 SRRDQ9UH36 339 aa14.86□□□□□ -0.03
HDGFL3-204ENST00000563790 CHD7Q9P2D1 2997 aa14.85□□□□□ -0.03
HDGFL3-204ENST00000563790 TAF1CQ15572 869 aaPredicted RBP14.85□□□□□ -0.03
HDGFL3-204ENST00000563790 SP8Q8IXZ3 490 aa14.85□□□□□ -0.03
HDGFL3-204ENST00000563790 IL27Q8NEV9 243 aa14.85□□□□□ -0.03
HDGFL3-204ENST00000563790 NECAB3Q96P71 396 aaPredicted RBP14.85□□□□□ -0.03
HDGFL3-204ENST00000563790 KCNQ5Q9NR82 932 aa14.85□□□□□ -0.03
HDGFL3-204ENST00000563790 ACACBO00763 2458 aa14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 TNNT2P45379 298 aaPredicted RBP14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 RAET1EQ8TD07 263 aa14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 DIS3LQ8TF46 1054 aaKnown RBP14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 CLMNQ96JQ2 1002 aa14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 CRISPLD2Q9H0B8 497 aa14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 BIN2Q9UBW5 565 aaPredicted RBP14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 LTBP2Q14767 1821 aa14.84□□□□□ -0.03
HDGFL3-204ENST00000563790 ECM29Q5VYK3 1845 aa14.83□□□□□ -0.04
HDGFL3-204ENST00000563790 GJA5P36382 358 aa14.83□□□□□ -0.04
HDGFL3-204ENST00000563790 MAP3K11Q16584 847 aa14.83□□□□□ -0.04
HDGFL3-204ENST00000563790 MYOZ2Q9NPC6 264 aa14.83□□□□□ -0.04
HDGFL3-204ENST00000563790 UNCXA6NJT0 531 aa14.82□□□□□ -0.04
HDGFL3-204ENST00000563790 RNMTO43148 476 aaKnown RBP14.82□□□□□ -0.04
HDGFL3-204ENST00000563790 MDM2Q00987 491 aaPredicted RBP14.82□□□□□ -0.04
HDGFL3-204ENST00000563790 TTC5Q8N0Z6 440 aa14.82□□□□□ -0.04
HDGFL3-204ENST00000563790 ABCC4O15439 1325 aa14.82□□□□□ -0.04
HDGFL3-204ENST00000563790 IBTKQ9P2D0 1353 aaPredicted RBP14.82□□□□□ -0.04
HDGFL3-204ENST00000563790 FAM186AA6NE01 2351 aa14.81□□□□□ -0.04
HDGFL3-204ENST00000563790 ST18O60284 1047 aa14.81□□□□□ -0.04
HDGFL3-204ENST00000563790 DEFB118Q96PH6 123 aa14.81□□□□□ -0.04
HDGFL3-204ENST00000563790 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
HDGFL3-204ENST00000563790 SMIM22K7EJ46 135 aa14.8□□□□□ -0.04
HDGFL3-204ENST00000563790 ECE2O60344 883 aa14.8□□□□□ -0.04
HDGFL3-204ENST00000563790 BBOX1O75936 387 aa14.8□□□□□ -0.04
HDGFL3-204ENST00000563790 WASHC4Q2M389 1173 aa14.8□□□□□ -0.04
HDGFL3-204ENST00000563790 C3orf67Q6ZVT6 689 aa14.8□□□□□ -0.04
HDGFL3-204ENST00000563790 AGBL3Q8NEM8 1001 aa14.8□□□□□ -0.04
HDGFL3-204ENST00000563790 PAK6Q9NQU5 681 aaPredicted RBP14.8□□□□□ -0.04
HDGFL3-204ENST00000563790 TLR2O60603 784 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 KRT37O76014 449 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 HOXD10P28358 340 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 SMAD3P84022 425 aaKnown RBP14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 ANKLE1Q8NAG6 615 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 MS4A4AQ96JQ5 239 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 ADGRA2Q96PE1 1338 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 FZD1Q9UP38 647 aa14.79□□□□□ -0.04
HDGFL3-204ENST00000563790 NBPF26B4DH59 902 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 RGS20O76081 388 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 OSBPP22059 807 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 CTGFP29279 349 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 NBPF9Q3BBW0 867 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 CACNA1HO95180 2353 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 MAST2Q6P0Q8 1798 aa14.78□□□□□ -0.04
HDGFL3-204ENST00000563790 MYPNQ86TC9 1320 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms