RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
SNX29-202ENST00000563308 SH3TC2Q8TF17 1288 aa13.11□□□□□ -0.31
SNX29-202ENST00000563308 ISCA1Q9BUE6 129 aa13.11□□□□□ -0.31
SNX29-202ENST00000563308 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
SNX29-202ENST00000563308 DBF4Q9UBU7 674 aaPredicted RBP13.11□□□□□ -0.31
SNX29-202ENST00000563308 ABCC4O15439 1325 aa13.11□□□□□ -0.31
SNX29-202ENST00000563308 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
SNX29-202ENST00000563308 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 YDJCA8MPS7 323 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 BMP8BP34820 402 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 GNAI1P63096 354 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 SCARF1Q14162 830 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 KIF22Q14807 665 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 ZNF428Q96B54 188 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 TRMT112Q9UI30 125 aaKnown RBP13.1□□□□□ -0.31
SNX29-202ENST00000563308 SH3TC1Q8TE82 1336 aa13.1□□□□□ -0.31
SNX29-202ENST00000563308 CRHR2Q13324 411 aa13.09□□□□□ -0.31
SNX29-202ENST00000563308 BRCA2P51587 3418 aa13.09□□□□□ -0.31
SNX29-202ENST00000563308 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
SNX29-202ENST00000563308 G3V3G9 751 aa13.08□□□□□ -0.32
SNX29-202ENST00000563308 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
SNX29-202ENST00000563308 BCAMP50895 628 aa13.08□□□□□ -0.32
SNX29-202ENST00000563308 TRIM28Q13263 835 aaKnown RBP13.08□□□□□ -0.32
SNX29-202ENST00000563308 WASHC4Q2M389 1173 aa13.08□□□□□ -0.32
SNX29-202ENST00000563308 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
SNX29-202ENST00000563308 SP8Q8IXZ3 490 aa13.08□□□□□ -0.32
SNX29-202ENST00000563308 SLC10A4Q96EP9 437 aa13.08□□□□□ -0.32
SNX29-202ENST00000563308 CENPFP49454 3210 aa13.07□□□□□ -0.32
SNX29-202ENST00000563308 LAMB2P55268 1798 aa13.07□□□□□ -0.32
SNX29-202ENST00000563308 WDHD1O75717 1129 aaPredicted RBP13.07□□□□□ -0.32
SNX29-202ENST00000563308 BBOX1O75936 387 aa13.07□□□□□ -0.32
SNX29-202ENST00000563308 FARP2O94887 1054 aaPredicted RBP13.07□□□□□ -0.32
SNX29-202ENST00000563308 PTPN12Q05209 780 aaKnown RBP13.07□□□□□ -0.32
SNX29-202ENST00000563308 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
SNX29-202ENST00000563308 PRKG1Q13976 671 aa13.07□□□□□ -0.32
SNX29-202ENST00000563308 TDHQ8IZJ6 230 aa13.07□□□□□ -0.32
SNX29-202ENST00000563308 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
SNX29-202ENST00000563308 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
SNX29-202ENST00000563308 DBNDD1Q9H9R9 158 aa13.07□□□□□ -0.32
SNX29-202ENST00000563308 ASTN2O75129 1339 aaPredicted RBP13.07□□□□□ -0.32
SNX29-202ENST00000563308 ZBTB48P10074 688 aaPredicted RBP13.06□□□□□ -0.32
SNX29-202ENST00000563308 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
SNX29-202ENST00000563308 GRAPQ13588 217 aa13.06□□□□□ -0.32
SNX29-202ENST00000563308 TSPYL6Q8N831 410 aa13.06□□□□□ -0.32
SNX29-202ENST00000563308 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
SNX29-202ENST00000563308 HTTP42858 3142 aa13.06□□□□□ -0.32
SNX29-202ENST00000563308 COL4A1P02462 1669 aa13.05□□□□□ -0.32
SNX29-202ENST00000563308 IGF2BP3O00425 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
SNX29-202ENST00000563308 GJA8P48165 433 aa13.05□□□□□ -0.32
SNX29-202ENST00000563308 SF3B3Q15393 1217 aaKnown RBP13.05□□□□□ -0.32
SNX29-202ENST00000563308 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
SNX29-202ENST00000563308 PRAMEF18Q5VWM3 479 aa13.05□□□□□ -0.32
SNX29-202ENST00000563308 DDX46Q7L014 1031 aaKnown RBP13.05□□□□□ -0.32
SNX29-202ENST00000563308 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
SNX29-202ENST00000563308 SHISA4Q96DD7 197 aa13.05□□□□□ -0.32
SNX29-202ENST00000563308 BIN2Q9UBW5 565 aaPredicted RBP13.05□□□□□ -0.32
SNX29-202ENST00000563308 HCN4Q9Y3Q4 1203 aa13.05□□□□□ -0.32
SNX29-202ENST00000563308 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
SNX29-202ENST00000563308 PRMT2P55345 433 aa13.04□□□□□ -0.32
SNX29-202ENST00000563308 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
SNX29-202ENST00000563308 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
SNX29-202ENST00000563308 FAM161BQ96MY7 647 aa13.04□□□□□ -0.32
SNX29-202ENST00000563308 GDF15Q99988 308 aa13.04□□□□□ -0.32
SNX29-202ENST00000563308 ANGEL1Q9UNK9 670 aaKnown RBP13.04□□□□□ -0.32
SNX29-202ENST00000563308 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
SNX29-202ENST00000563308 IRS4O14654 1257 aaPredicted RBP13.03□□□□□ -0.32
SNX29-202ENST00000563308 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 GNRH1P01148 92 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 GJB1P08034 283 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
SNX29-202ENST00000563308 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 FAM109BQ6ICB4 259 aaPredicted RBP13.03□□□□□ -0.32
SNX29-202ENST00000563308 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
SNX29-202ENST00000563308 EYA3Q99504 573 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 RNF208Q9H0X6 261 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 ZFYVE28Q9HCC9 887 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 TAF1P21675 1872 aa13.03□□□□□ -0.32
SNX29-202ENST00000563308 C6orf229H3BNL8 230 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 ECE2O60344 883 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
SNX29-202ENST00000563308 UBXN2AP68543 259 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 GOLGA2Q08379 1002 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 MTFR1Q15390 333 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
SNX29-202ENST00000563308 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 ZBTB38Q8NAP3 1195 aaPredicted RBP13.02□□□□□ -0.33
SNX29-202ENST00000563308 GUCD1Q96NT3 240 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 UBE2OQ9C0C9 1292 aaKnown RBP13.02□□□□□ -0.33
SNX29-202ENST00000563308 SYNGAP1Q96PV0 1343 aa13.02□□□□□ -0.33
SNX29-202ENST00000563308 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 MYD88Q99836 296 aa13.01□□□□□ -0.33
SNX29-202ENST00000563308 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms