RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 ARHGAP45Q92619 1136 aa15.39■□□□□ 0.05
NSMCE1-204ENST00000563273 API5Q9BZZ5 524 aaKnown RBP15.39■□□□□ 0.05
NSMCE1-204ENST00000563273 KIF16BQ96L93 1317 aa15.39■□□□□ 0.05
NSMCE1-204ENST00000563273 KIF4BQ2VIQ3 1234 aa15.38■□□□□ 0.05
NSMCE1-204ENST00000563273 DACT2Q5SW24 774 aa15.38■□□□□ 0.05
NSMCE1-204ENST00000563273 CST9Q5W186 159 aa15.38■□□□□ 0.05
NSMCE1-204ENST00000563273 BICC1Q9H694 974 aaKnown RBP15.38■□□□□ 0.05
NSMCE1-204ENST00000563273 MKRN1Q9UHC7 482 aaKnown RBP15.38■□□□□ 0.05
NSMCE1-204ENST00000563273 TRAF5O00463 557 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 USP17L8P0C7I0 530 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 UBE4AQ14139 1066 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 DEFB115Q30KQ5 88 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 TBC1D10BQ4KMP7 808 aaPredicted RBP15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 HHIPL1Q96JK4 782 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 GLIS2Q9BZE0 524 aaPredicted RBP15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 CNNM1Q9NRU3 951 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 NOB1Q9ULX3 412 aaKnown RBP15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 HDAC5Q9UQL6 1122 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 TLL2Q9Y6L7 1015 aa15.37■□□□□ 0.05
NSMCE1-204ENST00000563273 EGFRP00533 1210 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 IL1R1P14778 569 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 KLRK1P26718 216 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 ZNF804AQ7Z570 1209 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 ZNF594Q96JF6 807 aaPredicted RBP15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 CD209Q9NNX6 404 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 RIPOR2Q9Y4F9 1068 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 SCN9AQ15858 1988 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 MROH5Q6ZUA9 1318 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 PITPNM2Q9BZ72 1349 aa15.36■□□□□ 0.05
NSMCE1-204ENST00000563273 PCNTO95613 3336 aa15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 TAF5LO75529 589 aa15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 CELF2O95319 508 aaKnown RBP15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 VEGFBP49765 207 aa15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 FKBP1AP62942 108 aaKnown RBP15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 TTLL5Q6EMB2 1281 aa15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 KRT26Q7Z3Y9 468 aa15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 OGFOD1Q8N543 542 aa15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 HELBQ8NG08 1087 aaPredicted RBP15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 DCPSQ96C86 337 aaKnown RBP15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 MYOZ2Q9NPC6 264 aa15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 ABT1Q9ULW3 272 aaKnown RBP15.35■□□□□ 0.05
NSMCE1-204ENST00000563273 FMR1Q06787 632 aaKnown RBP eCLIP15.34■□□□□ 0.05
NSMCE1-204ENST00000563273 PSME4Q14997 1843 aa15.33■□□□□ 0.05
NSMCE1-204ENST00000563273 SNAP23O00161 211 aa15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 IPO8O15397 1037 aaKnown RBP15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 ECE1P42892 770 aa15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 SAPCD2Q86UD0 394 aa15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 SULF1Q8IWU6 871 aa15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
NSMCE1-204ENST00000563273 UBTFL1P0CB47 393 aaPredicted RBP15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 HSPA1AP0DMV8 641 aaKnown RBP15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 HSPA1BP0DMV9 641 aaKnown RBP15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 GTF2IP78347 998 aa15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 SCARF1Q14162 830 aa15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 PUS3Q9BZE2 481 aaKnown RBP15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 HDAC9Q9UKV0 1011 aa15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 WDR33Q9C0J8 1336 aaKnown RBP15.32■□□□□ 0.04
NSMCE1-204ENST00000563273 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
NSMCE1-204ENST00000563273 SASH1O94885 1247 aa15.31■□□□□ 0.04
NSMCE1-204ENST00000563273 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
NSMCE1-204ENST00000563273 VGLL2Q8N8G2 317 aa15.31■□□□□ 0.04
NSMCE1-204ENST00000563273 PLIN1O60240 522 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 PDE8BO95263 885 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 LRRC24Q50LG9 513 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 FAM205AQ6ZU69 1335 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 MTMR14Q8NCE2 650 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 FBXW7Q969H0 707 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 ZBED3Q96IU2 234 aaPredicted RBP15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 CAPNS2Q96L46 248 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 MXD3Q9BW11 206 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 WBP1LQ9NX94 342 aa15.3■□□□□ 0.04
NSMCE1-204ENST00000563273 ADM5C9JUS6 153 aa15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 WNT10BO00744 389 aa15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 GNAI3P08754 354 aa15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 MAP2K2P36507 400 aa15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 MAP2K1Q02750 393 aaPredicted RBP15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 PTPN12Q05209 780 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 METTL24Q5JXM2 366 aa15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 ANGEL2Q5VTE6 544 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 FBXO33Q7Z6M2 555 aa15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
NSMCE1-204ENST00000563273 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 EYA2O00167 538 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 CIAO1O76071 339 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 TRIM27P14373 513 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 FKBP1BP68106 108 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 KIAA0825Q8IV33 1275 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 CERS5Q8N5B7 392 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 C2orf69Q8N8R5 385 aa15.28■□□□□ 0.04
NSMCE1-204ENST00000563273 GBA2Q9HCG7 927 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms