RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 FAM117BQ6P1L5 589 aa6.94□□□□□ -1.3
DENND4A-205ENST00000562540 UTP4Q969X6 686 aaKnown RBP6.94□□□□□ -1.3
DENND4A-205ENST00000562540 COL26A1Q96A83 441 aa6.94□□□□□ -1.3
DENND4A-205ENST00000562540 CARD10Q9BWT7 1032 aa6.94□□□□□ -1.3
DENND4A-205ENST00000562540 KRTAP4-11Q9BYQ6 195 aa6.94□□□□□ -1.3
DENND4A-205ENST00000562540 FNDC3AQ9Y2H6 1198 aaKnown RBP6.94□□□□□ -1.3
DENND4A-205ENST00000562540 ZAP70P43403 619 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 UVSSAQ2YD98 709 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 RNF43Q68DV7 783 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 ABI1Q8IZP0 508 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 DBNDD2Q9BQY9 259 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 RASSF4Q9H2L5 321 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 KCNK4Q9NYG8 393 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 ZNF777Q9ULD5 760 aaPredicted RBP6.93□□□□□ -1.3
DENND4A-205ENST00000562540 ZMIZ1Q9ULJ6 1067 aa6.93□□□□□ -1.3
DENND4A-205ENST00000562540 TMEM132AQ24JP5 1023 aa6.92□□□□□ -1.3
DENND4A-205ENST00000562540 STK32AQ8WU08 396 aa6.92□□□□□ -1.3
DENND4A-205ENST00000562540 FAM177BA6PVY3 158 aa6.91□□□□□ -1.3
DENND4A-205ENST00000562540 FSCN2O14926 492 aa6.91□□□□□ -1.3
DENND4A-205ENST00000562540 NAA30Q147X3 362 aaPredicted RBP6.91□□□□□ -1.3
DENND4A-205ENST00000562540 DUOXA2Q1HG44 320 aa6.91□□□□□ -1.3
DENND4A-205ENST00000562540 KLHL23Q8NBE8 558 aa6.91□□□□□ -1.3
DENND4A-205ENST00000562540 GPR152Q8TDT2 470 aa6.91□□□□□ -1.3
DENND4A-205ENST00000562540 ABI2Q9NYB9 513 aaPredicted RBP6.91□□□□□ -1.3
DENND4A-205ENST00000562540 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
DENND4A-205ENST00000562540 KIF4AO95239 1232 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 PTPRAP18433 802 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 EPHA1P21709 976 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 FAM69CQ0P6D2 419 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 ELOAQ14241 798 aaKnown RBP6.9□□□□□ -1.3
DENND4A-205ENST00000562540 CAPN12Q6ZSI9 719 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 KIAA1211Q6ZU35 1233 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 NCAPG2Q86XI2 1143 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 SHKBP1Q8TBC3 707 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 FAM46AQ96IP4 442 aaKnown RBP6.9□□□□□ -1.3
DENND4A-205ENST00000562540 PBX4Q9BYU1 374 aa6.9□□□□□ -1.3
DENND4A-205ENST00000562540 DDX3YO15523 660 aaKnown RBP6.89□□□□□ -1.31
DENND4A-205ENST00000562540 CYP2E1P05181 493 aaPredicted RBP6.89□□□□□ -1.31
DENND4A-205ENST00000562540 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
DENND4A-205ENST00000562540 ADAMTSL4Q6UY14 1074 aa6.89□□□□□ -1.31
DENND4A-205ENST00000562540 POU5F2Q8N7G0 328 aa6.89□□□□□ -1.31
DENND4A-205ENST00000562540 ABTB2Q8N961 1025 aa6.89□□□□□ -1.31
DENND4A-205ENST00000562540 FOXD4L4Q8WXT5 416 aaPredicted RBP6.89□□□□□ -1.31
DENND4A-205ENST00000562540 MYRFLQ96LU7 910 aa6.89□□□□□ -1.31
DENND4A-205ENST00000562540 SEC31BQ9NQW1 1179 aa6.89□□□□□ -1.31
DENND4A-205ENST00000562540 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
DENND4A-205ENST00000562540 STIM2Q9P246 746 aa6.89□□□□□ -1.31
DENND4A-205ENST00000562540 TM4SF5O14894 197 aa6.88□□□□□ -1.31
DENND4A-205ENST00000562540 SART1O43290 800 aaKnown RBP6.88□□□□□ -1.31
DENND4A-205ENST00000562540 H3BRJ5 948 aa6.87□□□□□ -1.31
DENND4A-205ENST00000562540 ADAM11O75078 769 aa6.87□□□□□ -1.31
DENND4A-205ENST00000562540 CABP4P57796 275 aa6.87□□□□□ -1.31
DENND4A-205ENST00000562540 FAM20CQ8IXL6 584 aa6.87□□□□□ -1.31
DENND4A-205ENST00000562540 CEP120Q8N960 986 aa6.87□□□□□ -1.31
DENND4A-205ENST00000562540 KLHDC7BQ96G42 594 aa6.87□□□□□ -1.31
DENND4A-205ENST00000562540 KCNF1Q9H3M0 494 aa6.87□□□□□ -1.31
DENND4A-205ENST00000562540 ZBTB39O15060 712 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 PIP4K2BP78356 416 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.86□□□□□ -1.31
DENND4A-205ENST00000562540 CBLL1Q75N03 491 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 ZNF438Q7Z4V0 828 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 CLEC10AQ8IUN9 316 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 POP1Q99575 1024 aaKnown RBP6.86□□□□□ -1.31
DENND4A-205ENST00000562540 ADAM19Q9H013 955 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 ELP3Q9H9T3 547 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 KANSL3Q9P2N6 904 aa6.86□□□□□ -1.31
DENND4A-205ENST00000562540 BMP3P12645 472 aa6.85□□□□□ -1.31
DENND4A-205ENST00000562540 PREPP48147 710 aa6.85□□□□□ -1.31
DENND4A-205ENST00000562540 TMEM164Q5U3C3 297 aa6.85□□□□□ -1.31
DENND4A-205ENST00000562540 PDE12Q6L8Q7 609 aaKnown RBP6.85□□□□□ -1.31
DENND4A-205ENST00000562540 BEND4Q6ZU67 534 aa6.85□□□□□ -1.31
DENND4A-205ENST00000562540 NUDT16Q96DE0 195 aaKnown RBP6.85□□□□□ -1.31
DENND4A-205ENST00000562540 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
DENND4A-205ENST00000562540 TMEM63CQ9P1W3 806 aa6.85□□□□□ -1.31
DENND4A-205ENST00000562540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
DENND4A-205ENST00000562540 NLRP12P59046 1061 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 FDX2Q6P4F2 183 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 NFXL1Q6ZNB6 911 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 WNT8BQ93098 351 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 RUSC1Q9BVN2 902 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 RNF208Q9H0X6 261 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 OSGEPQ9NPF4 335 aa6.84□□□□□ -1.31
DENND4A-205ENST00000562540 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
DENND4A-205ENST00000562540 GAS2O43903 313 aaKnown RBP6.83□□□□□ -1.32
DENND4A-205ENST00000562540 ATG7O95352 703 aa6.83□□□□□ -1.32
DENND4A-205ENST00000562540 SLC7A3Q8WY07 619 aa6.83□□□□□ -1.32
DENND4A-205ENST00000562540 CLP1Q92989 425 aaKnown RBP6.83□□□□□ -1.32
DENND4A-205ENST00000562540 ZMYND15Q9H091 742 aa6.83□□□□□ -1.32
DENND4A-205ENST00000562540 HIF3AQ9Y2N7 669 aa6.83□□□□□ -1.32
DENND4A-205ENST00000562540 ACPPP15309 386 aa6.82□□□□□ -1.32
DENND4A-205ENST00000562540 COL19A1Q14993 1142 aa6.82□□□□□ -1.32
DENND4A-205ENST00000562540 ATCAYQ86WG3 371 aa6.82□□□□□ -1.32
DENND4A-205ENST00000562540 ASIC4Q96FT7 647 aa6.82□□□□□ -1.32
DENND4A-205ENST00000562540 CNTN3Q9P232 1028 aa6.82□□□□□ -1.32
DENND4A-205ENST00000562540 ANGEL1Q9UNK9 670 aaKnown RBP6.82□□□□□ -1.32
DENND4A-205ENST00000562540 PDE2AO00408 941 aaPredicted RBP6.81□□□□□ -1.32
DENND4A-205ENST00000562540 RPLP1P05386 114 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms