RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 TMEM88BA6NKF7 163 aa14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 CCDC57Q2TAC2 916 aa14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 RBM26Q5T8P6 1007 aaKnown RBP14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 CST9Q5W186 159 aa14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 RSBN1LQ6PCB5 846 aaPredicted RBP14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 PODNQ7Z5L7 613 aa14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 ANKRD2Q9GZV1 360 aa14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 TNNQ9UQP3 1299 aa14.01□□□□□ -0.17
LPCAT4-202ENST00000562404 CNTNAP1P78357 1384 aa14□□□□□ -0.17
LPCAT4-202ENST00000562404 H7C1D1 291 aa14□□□□□ -0.17
LPCAT4-202ENST00000562404 CT47B1P0C2W7 299 aaPredicted RBP14□□□□□ -0.17
LPCAT4-202ENST00000562404 RPS12P25398 132 aaKnown RBP14□□□□□ -0.17
LPCAT4-202ENST00000562404 BRPF1P55201 1214 aaPredicted RBP14□□□□□ -0.17
LPCAT4-202ENST00000562404 HNRNPUQ00839 825 aaKnown RBP eCLIP14□□□□□ -0.17
LPCAT4-202ENST00000562404 KLHDC4Q8TBB5 520 aa14□□□□□ -0.17
LPCAT4-202ENST00000562404 USP17L3A6NCW0 530 aa13.99□□□□□ -0.17
LPCAT4-202ENST00000562404 USP17L4A6NCW7 530 aa13.99□□□□□ -0.17
LPCAT4-202ENST00000562404 PLIN1O60240 522 aa13.99□□□□□ -0.17
LPCAT4-202ENST00000562404 DACT2Q5SW24 774 aa13.99□□□□□ -0.17
LPCAT4-202ENST00000562404 LDHAL6AQ6ZMR3 332 aa13.99□□□□□ -0.17
LPCAT4-202ENST00000562404 USP17L1Q7RTZ2 530 aa13.99□□□□□ -0.17
LPCAT4-202ENST00000562404 COA1Q9GZY4 146 aa13.99□□□□□ -0.17
LPCAT4-202ENST00000562404 BCAR3O75815 825 aa13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 LRRC24Q50LG9 513 aa13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 TAF7LQ5H9L4 462 aa13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 AGBL3Q8NEM8 1001 aa13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 ZC3H15Q8WU90 426 aaKnown RBP13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 CNNM1Q9NRU3 951 aa13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
LPCAT4-202ENST00000562404 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
LPCAT4-202ENST00000562404 VEGFBP49765 207 aa13.97□□□□□ -0.17
LPCAT4-202ENST00000562404 KIF4BQ2VIQ3 1234 aa13.97□□□□□ -0.17
LPCAT4-202ENST00000562404 C15orf52Q6ZUT6 534 aaKnown RBP13.97□□□□□ -0.17
LPCAT4-202ENST00000562404 USP48Q86UV5 1035 aa13.97□□□□□ -0.17
LPCAT4-202ENST00000562404 FBXW7Q969H0 707 aa13.97□□□□□ -0.17
LPCAT4-202ENST00000562404 CD209Q9NNX6 404 aa13.97□□□□□ -0.17
LPCAT4-202ENST00000562404 RASSF10A6NK89 507 aa13.96□□□□□ -0.17
LPCAT4-202ENST00000562404 ADM5C9JUS6 153 aa13.96□□□□□ -0.17
LPCAT4-202ENST00000562404 KCNJ4P48050 445 aa13.96□□□□□ -0.17
LPCAT4-202ENST00000562404 GTF2IP78347 998 aa13.96□□□□□ -0.17
LPCAT4-202ENST00000562404 STRIP1Q5VSL9 837 aa13.96□□□□□ -0.17
LPCAT4-202ENST00000562404 CERS5Q8N5B7 392 aa13.96□□□□□ -0.17
LPCAT4-202ENST00000562404 SCAF8Q9UPN6 1271 aaKnown RBP13.96□□□□□ -0.17
LPCAT4-202ENST00000562404 CELF2O95319 508 aaKnown RBP13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 USP17L8P0C7I0 530 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 DEFB115Q30KQ5 88 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 TTLL5Q6EMB2 1281 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 CDC37L1Q7L3B6 337 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 VGLL2Q8N8G2 317 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 MEIS3Q99687 375 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 API5Q9BZZ5 524 aaKnown RBP13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 GGA3Q9NZ52 723 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 ABT1Q9ULW3 272 aaKnown RBP13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 JAG2Q9Y219 1238 aa13.95□□□□□ -0.18
LPCAT4-202ENST00000562404 ECM29Q5VYK3 1845 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 THSD7BQ9C0I4 1608 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 HSPA1AP0DMV8 641 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 HSPA1BP0DMV9 641 aaKnown RBP13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 IL1R1P14778 569 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 SCARF1Q14162 830 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 KRT26Q7Z3Y9 468 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 ARAP2Q8WZ64 1704 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 ZNF408Q9H9D4 720 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 TLL2Q9Y6L7 1015 aa13.94□□□□□ -0.18
LPCAT4-202ENST00000562404 TRIM27P14373 513 aa13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 GYG1P46976 350 aa13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 PTPN12Q05209 780 aaKnown RBP13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 ANGEL2Q5VTE6 544 aaKnown RBP13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 CYP4F22Q6NT55 531 aa13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 KIAA0825Q8IV33 1275 aa13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 ARHGAP45Q92619 1136 aa13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 FAM84BQ96KN1 310 aaPredicted RBP13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 PCDHAC2Q9Y5I4 1007 aa13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 LRRFIP2Q9Y608 721 aaKnown RBP13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 MYH13Q9UKX3 1938 aa13.93□□□□□ -0.18
LPCAT4-202ENST00000562404 KIF16BQ96L93 1317 aa13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 WNT10BO00744 389 aa13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 UBTFL1P0CB47 393 aaPredicted RBP13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 UBE4AQ14139 1066 aa13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 INTS3Q68E01 1043 aaKnown RBP13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 SAPCD2Q86UD0 394 aa13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 FRAT1Q92837 279 aaPredicted RBP13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 DCPSQ96C86 337 aaKnown RBP13.92□□□□□ -0.18
LPCAT4-202ENST00000562404 ZBED9Q6R2W3 1325 aa13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 WDR33Q9C0J8 1336 aaKnown RBP13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 SASH1O94885 1247 aa13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 METTL24Q5JXM2 366 aa13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 ATG9AQ7Z3C6 839 aa13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 ZNF804AQ7Z570 1209 aa13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 TDRD7Q8NHU6 1098 aaKnown RBP13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 CLUAP1Q96AJ1 413 aa13.91□□□□□ -0.18
LPCAT4-202ENST00000562404 AOX1Q06278 1338 aa13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 MYO3BQ8WXR4 1341 aa13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 PDE8BO95263 885 aa13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 ATF7IPQ6VMQ6 1270 aa13.9□□□□□ -0.18
LPCAT4-202ENST00000562404 ZBED3Q96IU2 234 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms