RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MYOZ2Q9NPC6 264 aa21.39■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 PLA2G12BQ9BX93 195 aa21.38■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 FKBP5Q13451 457 aaPredicted RBP21.37■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 MXD3Q9BW11 206 aa21.37■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 FAM161AQ3B820 660 aa21.36■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 DACT2Q5SW24 774 aa21.36■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 TXNRD3Q86VQ6 643 aa21.36■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 DNAAF4Q8WXU2 420 aa21.36■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 SALL2Q9Y467 1007 aaPredicted RBP21.36■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 VAMP4O75379 141 aa21.35■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 ITGA6P23229 1130 aa21.35■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 IGHMBP2P38935 993 aaKnown RBP21.35■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 ZNF157P51786 506 aaPredicted RBP21.35■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 CCDC102AQ96A19 550 aa21.35■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 SCAF8Q9UPN6 1271 aaKnown RBP21.35■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 PITPNM2Q9BZ72 1349 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 CASP8AP2Q9UKL3 1982 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 CSF1RP07333 972 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 KLRK1P26718 216 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 KIF23Q02241 960 aaPredicted RBP21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 LINS1Q8NG48 757 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 LEMD3Q9Y2U8 911 aa21.34■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 PAPPA2Q9BXP8 1791 aa21.33■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 SLC10A3P09131 477 aa21.33■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 EXOSC9Q06265 439 aaKnown RBP21.33■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 NBPF9Q3BBW0 867 aa21.33■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 WDR63Q8IWG1 891 aa21.33■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 COA1Q9GZY4 146 aa21.33■■□□□ 1.01
VPS9D1-AS1-201ENST00000562298 ZNF804BA4D1E1 1349 aa21.32■■□□□ 1
VPS9D1-AS1-201ENST00000562298 STRIP1Q5VSL9 837 aa21.32■■□□□ 1
VPS9D1-AS1-201ENST00000562298 FBXW7Q969H0 707 aa21.32■■□□□ 1
VPS9D1-AS1-201ENST00000562298 SPINK5Q9NQ38 1064 aaPredicted RBP21.32■■□□□ 1
VPS9D1-AS1-201ENST00000562298 A0A1B0GUL6 1792 aa21.31■■□□□ 1
VPS9D1-AS1-201ENST00000562298 CCDC85CA6NKD9 419 aa21.31■■□□□ 1
VPS9D1-AS1-201ENST00000562298 MPHOSPH8Q99549 860 aa21.31■■□□□ 1
VPS9D1-AS1-201ENST00000562298 MCOLN1Q9GZU1 580 aa21.31■■□□□ 1
VPS9D1-AS1-201ENST00000562298 ANKRD2Q9GZV1 360 aa21.31■■□□□ 1
VPS9D1-AS1-201ENST00000562298 MYO3BQ8WXR4 1341 aa21.3■■□□□ 1
VPS9D1-AS1-201ENST00000562298 ANP32CO43423 234 aa21.3■■□□□ 1
VPS9D1-AS1-201ENST00000562298 RASAL3Q86YV0 1011 aa21.3■■□□□ 1
VPS9D1-AS1-201ENST00000562298 SAGE1Q9NXZ1 904 aa21.3■■□□□ 1
VPS9D1-AS1-201ENST00000562298 F6X3S4 739 aa21.29■■□□□ 1
VPS9D1-AS1-201ENST00000562298 WNT10BO00744 389 aa21.29■■□□□ 1
VPS9D1-AS1-201ENST00000562298 FKBP1BP68106 108 aa21.29■■□□□ 1
VPS9D1-AS1-201ENST00000562298 CHRNDQ07001 517 aa21.29■■□□□ 1
VPS9D1-AS1-201ENST00000562298 PRAMEF18Q5VWM3 479 aa21.29■■□□□ 1
VPS9D1-AS1-201ENST00000562298 MOB2Q70IA6 237 aa21.29■■□□□ 1
VPS9D1-AS1-201ENST00000562298 FOXO4P98177 505 aa21.28■■□□□ 1
VPS9D1-AS1-201ENST00000562298 BEND3Q5T5X7 828 aa21.28■■□□□ 1
VPS9D1-AS1-201ENST00000562298 TTLL5Q6EMB2 1281 aa21.28■■□□□ 1
VPS9D1-AS1-201ENST00000562298 OGFOD1Q8N543 542 aa21.28■■□□□ 1
VPS9D1-AS1-201ENST00000562298 CSRNP1Q96S65 589 aa21.28■■□□□ 1
VPS9D1-AS1-201ENST00000562298 RNF186Q9NXI6 227 aa21.28■■□□□ 1
VPS9D1-AS1-201ENST00000562298 IRS2Q9Y4H2 1338 aa21.28■■□□□ 1
VPS9D1-AS1-201ENST00000562298 ANKRD18BA2A2Z9 1011 aa21.27■■□□□ 1
VPS9D1-AS1-201ENST00000562298 SNAP23O00161 211 aa21.27■■□□□ 1
VPS9D1-AS1-201ENST00000562298 SASH1O94885 1247 aa21.27■■□□□ 1
VPS9D1-AS1-201ENST00000562298 DGKZQ13574 1117 aa21.27■■□□□ 1
VPS9D1-AS1-201ENST00000562298 AKAP11Q9UKA4 1901 aa21.26■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 TRPA1O75762 1119 aa21.26■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 GTF2IP78347 998 aa21.26■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 KIAA0825Q8IV33 1275 aa21.26■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 TAF5LO75529 589 aa21.25■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 KCNJ4P48050 445 aa21.25■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 CD209Q9NNX6 404 aa21.25■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 TNRC18O15417 2968 aaPredicted RBP21.25■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 UBE2Q2LH0YL09 131 aa21.24■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 IFIT5Q13325 482 aaKnown RBP21.24■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 EPHA10Q5JZY3 1008 aa21.24■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 HELBQ8NG08 1087 aaPredicted RBP21.24■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 RGS19P49795 217 aa21.23■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 MMP14P50281 582 aa21.23■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 ZBED3Q96IU2 234 aaPredicted RBP21.23■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 CHMP3Q9Y3E7 222 aa21.23■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 ZEB1P37275 1124 aaPredicted RBP21.22■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 LMBR1LQ6UX01 489 aa21.22■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 C15orf52Q6ZUT6 534 aaKnown RBP21.22■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 REM2Q8IYK8 340 aaPredicted RBP21.22■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 CERS5Q8N5B7 392 aa21.22■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 HDAC9Q9UKV0 1011 aa21.22■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 GRM8O00222 908 aa21.21■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 ZNF594Q96JF6 807 aaPredicted RBP21.21■□□□□ 0.99
VPS9D1-AS1-201ENST00000562298 TTLL12Q14166 644 aaPredicted RBP21.2■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 APOBEC3FQ8IUX4 373 aaKnown RBP21.2■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 IL1R1P14778 569 aa21.19■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 ECM29Q5VYK3 1845 aa21.18■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 NF2P35240 595 aa21.18■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 MLLT1Q03111 559 aaPredicted RBP21.18■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 CCDC57Q2TAC2 916 aa21.18■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 PCDHAC2Q9Y5I4 1007 aa21.18■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 SLC4A10Q6U841 1118 aa21.17■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 LDHAL6AQ6ZMR3 332 aa21.17■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 ZNF804AQ7Z570 1209 aa21.17■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 C9orf78Q9NZ63 289 aaPredicted RBP21.17■□□□□ 0.98
VPS9D1-AS1-201ENST00000562298 COL1A1P02452 1464 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms