RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 USP48Q86UV5 1035 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 OTUD5Q96G74 571 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 PODXL2Q9NZ53 605 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 A0A1B0GUL6 1792 aa10.51□□□□□ -0.73
GINS3-204ENST00000561952 WDR33Q9C0J8 1336 aaKnown RBP10.51□□□□□ -0.73
GINS3-204ENST00000561952 H7C1W4 665 aa10.5□□□□□ -0.73
GINS3-204ENST00000561952 ITGA6P23229 1130 aa10.5□□□□□ -0.73
GINS3-204ENST00000561952 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
GINS3-204ENST00000561952 IGHMBP2P38935 993 aaKnown RBP10.5□□□□□ -0.73
GINS3-204ENST00000561952 CST9Q5W186 159 aa10.5□□□□□ -0.73
GINS3-204ENST00000561952 SLC4A10Q6U841 1118 aa10.5□□□□□ -0.73
GINS3-204ENST00000561952 MINPP1Q9UNW1 487 aa10.5□□□□□ -0.73
GINS3-204ENST00000561952 ADM5C9JUS6 153 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 AOC2O75106 756 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 CCT4P50991 539 aaKnown RBP10.49□□□□□ -0.73
GINS3-204ENST00000561952 CASP7P55210 303 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 KIF4BQ2VIQ3 1234 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 LINS1Q8NG48 757 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 DPF2Q92785 391 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 CAPNS2Q96L46 248 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 MPHOSPH8Q99549 860 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 MXD3Q9BW11 206 aa10.49□□□□□ -0.73
GINS3-204ENST00000561952 BSDC1Q9NW68 430 aaPredicted RBP10.49□□□□□ -0.73
GINS3-204ENST00000561952 ASTN2O75129 1339 aaPredicted RBP10.49□□□□□ -0.73
GINS3-204ENST00000561952 ZNF646O15015 1829 aaPredicted RBP10.49□□□□□ -0.73
GINS3-204ENST00000561952 RPS12P25398 132 aaKnown RBP10.48□□□□□ -0.73
GINS3-204ENST00000561952 KLRK1P26718 216 aa10.48□□□□□ -0.73
GINS3-204ENST00000561952 KCNJ4P48050 445 aa10.48□□□□□ -0.73
GINS3-204ENST00000561952 RSBN1LQ6PCB5 846 aaPredicted RBP10.48□□□□□ -0.73
GINS3-204ENST00000561952 CDC37L1Q7L3B6 337 aa10.48□□□□□ -0.73
GINS3-204ENST00000561952 KRT26Q7Z3Y9 468 aa10.48□□□□□ -0.73
GINS3-204ENST00000561952 GGA3Q9NZ52 723 aa10.48□□□□□ -0.73
GINS3-204ENST00000561952 SCAF8Q9UPN6 1271 aaKnown RBP10.48□□□□□ -0.73
GINS3-204ENST00000561952 TLL2Q9Y6L7 1015 aa10.48□□□□□ -0.73
GINS3-204ENST00000561952 MED23Q9ULK4 1368 aa10.48□□□□□ -0.73
GINS3-204ENST00000561952 THSD7BQ9C0I4 1608 aa10.47□□□□□ -0.73
GINS3-204ENST00000561952 ANKRD18BA2A2Z9 1011 aa10.47□□□□□ -0.73
GINS3-204ENST00000561952 SNAP23O00161 211 aa10.47□□□□□ -0.73
GINS3-204ENST00000561952 VIL1P09327 827 aaKnown RBP10.47□□□□□ -0.73
GINS3-204ENST00000561952 BEND3Q5T5X7 828 aa10.47□□□□□ -0.73
GINS3-204ENST00000561952 TXNRD3Q86VQ6 643 aa10.47□□□□□ -0.73
GINS3-204ENST00000561952 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
GINS3-204ENST00000561952 ZC3H15Q8WU90 426 aaKnown RBP10.47□□□□□ -0.73
GINS3-204ENST00000561952 DCPSQ96C86 337 aaKnown RBP10.47□□□□□ -0.73
GINS3-204ENST00000561952 ZNF594Q96JF6 807 aaPredicted RBP10.47□□□□□ -0.73
GINS3-204ENST00000561952 PLA2G12BQ9BX93 195 aa10.47□□□□□ -0.73
GINS3-204ENST00000561952 TSKSQ9UJT2 592 aa10.47□□□□□ -0.73
GINS3-204ENST00000561952 USP17L3A6NCW0 530 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 USP17L4A6NCW7 530 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 PLIN1O60240 522 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 TAF5LO75529 589 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 ECE1P42892 770 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 CTCFP49711 727 aaPredicted RBP10.46□□□□□ -0.73
GINS3-204ENST00000561952 LBX1P52954 281 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 CHRNDQ07001 517 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 TAF7LQ5H9L4 462 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 EPHA10Q5JZY3 1008 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 ANGEL2Q5VTE6 544 aaKnown RBP10.46□□□□□ -0.73
GINS3-204ENST00000561952 USP17L1Q7RTZ2 530 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 SAPCD2Q86UD0 394 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.73
GINS3-204ENST00000561952 PGAP2Q9UHJ9 254 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 ZNF804BA4D1E1 1349 aa10.46□□□□□ -0.73
GINS3-204ENST00000561952 ZNF521Q96K83 1311 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 GRM8O00222 908 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 CSF1RP07333 972 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 USP17L8P0C7I0 530 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 HUNKP57058 714 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 FOXO4P98177 505 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 IFIT5Q13325 482 aaKnown RBP10.45□□□□□ -0.74
GINS3-204ENST00000561952 SCARF1Q14162 830 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 LMBR1LQ6UX01 489 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 PODNQ7Z5L7 613 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 AGBL3Q8NEM8 1001 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 MYOZ2Q9NPC6 264 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
GINS3-204ENST00000561952 SASH1O94885 1247 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 HSPA8P11142 646 aaKnown RBP10.44□□□□□ -0.74
GINS3-204ENST00000561952 MAP2K1Q02750 393 aaPredicted RBP10.44□□□□□ -0.74
GINS3-204ENST00000561952 CDCA7LQ96GN5 454 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 SUCLG2Q96I99 432 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 BEGAINQ9BUH8 593 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 SRCIN1Q9C0H9 1055 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 ANKRD2Q9GZV1 360 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 GBA2Q9HCG7 927 aaPredicted RBP10.44□□□□□ -0.74
GINS3-204ENST00000561952 CNNM1Q9NRU3 951 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 JAG2Q9Y219 1238 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 LEMD3Q9Y2U8 911 aa10.44□□□□□ -0.74
GINS3-204ENST00000561952 E9PSI1 815 aa10.43□□□□□ -0.74
GINS3-204ENST00000561952 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
GINS3-204ENST00000561952 ZNF280AP59817 542 aaPredicted RBP10.43□□□□□ -0.74
GINS3-204ENST00000561952 GTF2IP78347 998 aa10.43□□□□□ -0.74
GINS3-204ENST00000561952 CCDC57Q2TAC2 916 aa10.43□□□□□ -0.74
GINS3-204ENST00000561952 DACT2Q5SW24 774 aa10.43□□□□□ -0.74
GINS3-204ENST00000561952 KIAA0825Q8IV33 1275 aa10.43□□□□□ -0.74
GINS3-204ENST00000561952 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
GINS3-204ENST00000561952 CDCA5Q96FF9 252 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms