RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 USP17L8P0C7I0 530 aa18.66■□□□□ 0.58
SPG7-205ENST00000561945 MMP14P50281 582 aa18.66■□□□□ 0.58
SPG7-205ENST00000561945 SCARF1Q14162 830 aa18.66■□□□□ 0.58
SPG7-205ENST00000561945 GCKRQ14397 625 aa18.66■□□□□ 0.58
SPG7-205ENST00000561945 CDCA5Q96FF9 252 aa18.66■□□□□ 0.58
SPG7-205ENST00000561945 MYOZ2Q9NPC6 264 aa18.66■□□□□ 0.58
SPG7-205ENST00000561945 SLC10A3P09131 477 aa18.65■□□□□ 0.58
SPG7-205ENST00000561945 RGS19P49795 217 aa18.65■□□□□ 0.58
SPG7-205ENST00000561945 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
SPG7-205ENST00000561945 FKBP1BP68106 108 aa18.65■□□□□ 0.58
SPG7-205ENST00000561945 DACT2Q5SW24 774 aa18.65■□□□□ 0.58
SPG7-205ENST00000561945 AKAP11Q9UKA4 1901 aa18.64■□□□□ 0.58
SPG7-205ENST00000561945 FLIIQ13045 1269 aa18.64■□□□□ 0.57
SPG7-205ENST00000561945 ANGEL2Q5VTE6 544 aaKnown RBP18.64■□□□□ 0.57
SPG7-205ENST00000561945 COA1Q9GZY4 146 aa18.64■□□□□ 0.57
SPG7-205ENST00000561945 LEMD3Q9Y2U8 911 aa18.64■□□□□ 0.57
SPG7-205ENST00000561945 MYO3BQ8WXR4 1341 aa18.64■□□□□ 0.57
SPG7-205ENST00000561945 STRIP1Q5VSL9 837 aa18.63■□□□□ 0.57
SPG7-205ENST00000561945 UBE3BQ7Z3V4 1068 aa18.63■□□□□ 0.57
SPG7-205ENST00000561945 WDR63Q8IWG1 891 aa18.63■□□□□ 0.57
SPG7-205ENST00000561945 LINS1Q8NG48 757 aa18.63■□□□□ 0.57
SPG7-205ENST00000561945 FANCIQ9NVI1 1328 aa18.63■□□□□ 0.57
SPG7-205ENST00000561945 VAMP4O75379 141 aa18.62■□□□□ 0.57
SPG7-205ENST00000561945 ZNF157P51786 506 aaPredicted RBP18.62■□□□□ 0.57
SPG7-205ENST00000561945 KIF23Q02241 960 aaPredicted RBP18.62■□□□□ 0.57
SPG7-205ENST00000561945 REM2Q8IYK8 340 aaPredicted RBP18.62■□□□□ 0.57
SPG7-205ENST00000561945 DNAAF4Q8WXU2 420 aa18.62■□□□□ 0.57
SPG7-205ENST00000561945 TNRC18O15417 2968 aaPredicted RBP18.61■□□□□ 0.57
SPG7-205ENST00000561945 IRS2Q9Y4H2 1338 aa18.61■□□□□ 0.57
SPG7-205ENST00000561945 ITGA6P23229 1130 aa18.61■□□□□ 0.57
SPG7-205ENST00000561945 TXNRD3Q86VQ6 643 aa18.61■□□□□ 0.57
SPG7-205ENST00000561945 MCOLN1Q9GZU1 580 aa18.61■□□□□ 0.57
SPG7-205ENST00000561945 ANKRD2Q9GZV1 360 aa18.61■□□□□ 0.57
SPG7-205ENST00000561945 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
SPG7-205ENST00000561945 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
SPG7-205ENST00000561945 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
SPG7-205ENST00000561945 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
SPG7-205ENST00000561945 C15orf52Q6ZUT6 534 aaKnown RBP18.59■□□□□ 0.57
SPG7-205ENST00000561945 RASAL3Q86YV0 1011 aa18.59■□□□□ 0.57
SPG7-205ENST00000561945 CSRNP1Q96S65 589 aa18.59■□□□□ 0.57
SPG7-205ENST00000561945 RNF186Q9NXI6 227 aa18.59■□□□□ 0.57
SPG7-205ENST00000561945 ECM29Q5VYK3 1845 aa18.58■□□□□ 0.57
SPG7-205ENST00000561945 LAMB1P07942 1786 aa18.58■□□□□ 0.57
SPG7-205ENST00000561945 WNT10BO00744 389 aa18.58■□□□□ 0.56
SPG7-205ENST00000561945 FKBP5Q13451 457 aaPredicted RBP18.58■□□□□ 0.56
SPG7-205ENST00000561945 NBPF9Q3BBW0 867 aa18.58■□□□□ 0.56
SPG7-205ENST00000561945 ZBED3Q96IU2 234 aaPredicted RBP18.58■□□□□ 0.56
SPG7-205ENST00000561945 FOXO4P98177 505 aa18.57■□□□□ 0.56
SPG7-205ENST00000561945 OGFOD1Q8N543 542 aa18.57■□□□□ 0.56
SPG7-205ENST00000561945 MXD3Q9BW11 206 aa18.57■□□□□ 0.56
SPG7-205ENST00000561945 MRS2Q9HD23 443 aa18.57■□□□□ 0.56
SPG7-205ENST00000561945 CCDC85CA6NKD9 419 aa18.56■□□□□ 0.56
SPG7-205ENST00000561945 KLRK1P26718 216 aa18.56■□□□□ 0.56
SPG7-205ENST00000561945 CHRNDQ07001 517 aa18.56■□□□□ 0.56
SPG7-205ENST00000561945 BEND3Q5T5X7 828 aa18.56■□□□□ 0.56
SPG7-205ENST00000561945 MPHOSPH8Q99549 860 aa18.56■□□□□ 0.56
SPG7-205ENST00000561945 COL1A1P02452 1464 aaPredicted RBP18.55■□□□□ 0.56
SPG7-205ENST00000561945 EXOSC9Q06265 439 aaKnown RBP18.55■□□□□ 0.56
SPG7-205ENST00000561945 DGKZQ13574 1117 aa18.55■□□□□ 0.56
SPG7-205ENST00000561945 TTLL5Q6EMB2 1281 aa18.55■□□□□ 0.56
SPG7-205ENST00000561945 ANKRD18BA2A2Z9 1011 aa18.54■□□□□ 0.56
SPG7-205ENST00000561945 TRPA1O75762 1119 aa18.54■□□□□ 0.56
SPG7-205ENST00000561945 MTMR14Q8NCE2 650 aa18.54■□□□□ 0.56
SPG7-205ENST00000561945 CD209Q9NNX6 404 aa18.54■□□□□ 0.56
SPG7-205ENST00000561945 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
SPG7-205ENST00000561945 IL1R1P14778 569 aa18.52■□□□□ 0.56
SPG7-205ENST00000561945 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.56
SPG7-205ENST00000561945 MLLT1Q03111 559 aaPredicted RBP18.52■□□□□ 0.56
SPG7-205ENST00000561945 MOB2Q70IA6 237 aa18.52■□□□□ 0.56
SPG7-205ENST00000561945 APOBEC3FQ8IUX4 373 aaKnown RBP18.52■□□□□ 0.56
SPG7-205ENST00000561945 SASH1O94885 1247 aa18.51■□□□□ 0.55
SPG7-205ENST00000561945 TM4SF4P48230 202 aa18.51■□□□□ 0.55
SPG7-205ENST00000561945 GTF2IP78347 998 aa18.51■□□□□ 0.55
SPG7-205ENST00000561945 IFIT5Q13325 482 aaKnown RBP18.51■□□□□ 0.55
SPG7-205ENST00000561945 NOM1Q5C9Z4 860 aaKnown RBP18.51■□□□□ 0.55
SPG7-205ENST00000561945 HDAC9Q9UKV0 1011 aa18.51■□□□□ 0.55
SPG7-205ENST00000561945 SCAF8Q9UPN6 1271 aaKnown RBP18.51■□□□□ 0.55
SPG7-205ENST00000561945 F6X3S4 739 aa18.5■□□□□ 0.55
SPG7-205ENST00000561945 UBE2Q2LH0YL09 131 aa18.5■□□□□ 0.55
SPG7-205ENST00000561945 ANP32CO43423 234 aa18.5■□□□□ 0.55
SPG7-205ENST00000561945 KIAA0825Q8IV33 1275 aa18.5■□□□□ 0.55
SPG7-205ENST00000561945 CERS5Q8N5B7 392 aa18.5■□□□□ 0.55
SPG7-205ENST00000561945 CFHR5Q9BXR6 569 aa18.5■□□□□ 0.55
SPG7-205ENST00000561945 ARAP2Q8WZ64 1704 aa18.49■□□□□ 0.55
SPG7-205ENST00000561945 GRM8O00222 908 aa18.49■□□□□ 0.55
SPG7-205ENST00000561945 NF2P35240 595 aa18.49■□□□□ 0.55
SPG7-205ENST00000561945 EPHA10Q5JZY3 1008 aa18.49■□□□□ 0.55
SPG7-205ENST00000561945 LDLRAD1Q5T700 205 aa18.49■□□□□ 0.55
SPG7-205ENST00000561945 PRAMEF18Q5VWM3 479 aa18.49■□□□□ 0.55
SPG7-205ENST00000561945 TAF5LO75529 589 aa18.48■□□□□ 0.55
SPG7-205ENST00000561945 ALDH1L1O75891 902 aa18.48■□□□□ 0.55
SPG7-205ENST00000561945 KCNJ4P48050 445 aa18.48■□□□□ 0.55
SPG7-205ENST00000561945 MAP3K11Q16584 847 aa18.48■□□□□ 0.55
SPG7-205ENST00000561945 LMBR1LQ6UX01 489 aa18.48■□□□□ 0.55
SPG7-205ENST00000561945 FBXW7Q969H0 707 aa18.48■□□□□ 0.55
SPG7-205ENST00000561945 ZNF521Q96K83 1311 aa18.48■□□□□ 0.55
SPG7-205ENST00000561945 SSC5DA1L4H1 1573 aa18.47■□□□□ 0.55
SPG7-205ENST00000561945 SNAP23O00161 211 aa18.47■□□□□ 0.55
SPG7-205ENST00000561945 ZEB1P37275 1124 aaPredicted RBP18.47■□□□□ 0.55
SPG7-205ENST00000561945 CTU1Q7Z7A3 348 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms