RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 STK31Q9BXU1 1019 aa15.2■□□□□ 0.02
CARMIL3-204ENST00000561354 GREM2Q9H772 168 aa15.2■□□□□ 0.02
CARMIL3-204ENST00000561354 PAPPA2Q9BXP8 1791 aa15.2■□□□□ 0.02
CARMIL3-204ENST00000561354 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 H7C1W4 665 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 MMP14P50281 582 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 DACT2Q5SW24 774 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 STRIP1Q5VSL9 837 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 COA1Q9GZY4 146 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 LEMD3Q9Y2U8 911 aa15.19■□□□□ 0.02
CARMIL3-204ENST00000561354 MYH3P11055 1940 aa15.18■□□□□ 0.02
CARMIL3-204ENST00000561354 CCDC27Q2M243 656 aa15.18■□□□□ 0.02
CARMIL3-204ENST00000561354 CWF19L2Q2TBE0 894 aaKnown RBP15.18■□□□□ 0.02
CARMIL3-204ENST00000561354 NBPF9Q3BBW0 867 aa15.18■□□□□ 0.02
CARMIL3-204ENST00000561354 PLA2G12BQ9BX93 195 aa15.18■□□□□ 0.02
CARMIL3-204ENST00000561354 WNT10BO00744 389 aa15.17■□□□□ 0.02
CARMIL3-204ENST00000561354 TSR2Q969E8 191 aaKnown RBP15.17■□□□□ 0.02
CARMIL3-204ENST00000561354 IGHMBP2P38935 993 aaKnown RBP15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 TWISTNBQ3B726 338 aaPredicted RBP15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 CTU1Q7Z7A3 348 aaKnown RBP15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 ANKRD2Q9GZV1 360 aa15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 ZNF804BA4D1E1 1349 aa15.16■□□□□ 0.02
CARMIL3-204ENST00000561354 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 GCKRQ14397 625 aa15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 MOB2Q70IA6 237 aa15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 G2E3Q7L622 706 aa15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 WWC1Q8IX03 1113 aa15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 SCAF8Q9UPN6 1271 aaKnown RBP15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 ZNF646O15015 1829 aaPredicted RBP15.15■□□□□ 0.02
CARMIL3-204ENST00000561354 CSF1RP07333 972 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 ITGA6P23229 1130 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 NF2P35240 595 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 TM4SF4P48230 202 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 CASP7P55210 303 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 PRAMEF18Q5VWM3 479 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 TTLL5Q6EMB2 1281 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 MPHOSPH8Q99549 860 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 IL16Q14005 1332 aa15.14■□□□□ 0.01
CARMIL3-204ENST00000561354 FLIIQ13045 1269 aa15.13■□□□□ 0.01
CARMIL3-204ENST00000561354 TTLL12Q14166 644 aaPredicted RBP15.13■□□□□ 0.01
CARMIL3-204ENST00000561354 PKN2Q16513 984 aaKnown RBP15.13■□□□□ 0.01
CARMIL3-204ENST00000561354 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
CARMIL3-204ENST00000561354 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
CARMIL3-204ENST00000561354 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
CARMIL3-204ENST00000561354 HDAC9Q9UKV0 1011 aa15.13■□□□□ 0.01
CARMIL3-204ENST00000561354 SASH1O94885 1247 aa15.12■□□□□ 0.01
CARMIL3-204ENST00000561354 APOBEC3FQ8IUX4 373 aaKnown RBP15.12■□□□□ 0.01
CARMIL3-204ENST00000561354 LINS1Q8NG48 757 aa15.12■□□□□ 0.01
CARMIL3-204ENST00000561354 DNAAF4Q8WXU2 420 aa15.12■□□□□ 0.01
CARMIL3-204ENST00000561354 ZBED3Q96IU2 234 aaPredicted RBP15.12■□□□□ 0.01
CARMIL3-204ENST00000561354 KLRK1P26718 216 aa15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 SOX10P56693 466 aa15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 GTF2IP78347 998 aa15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 CHRNDQ07001 517 aa15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 CCDC184Q52MB2 194 aa15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 ARMC9Q7Z3E5 817 aa15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 KIAA0825Q8IV33 1275 aa15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 ZNF296Q8WUU4 475 aaPredicted RBP15.11■□□□□ 0.01
CARMIL3-204ENST00000561354 ANKRD18BA2A2Z9 1011 aa15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 KCNJ4P48050 445 aa15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 SREBF2Q12772 1141 aa15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 LDLRAD1Q5T700 205 aa15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 C15orf52Q6ZUT6 534 aaKnown RBP15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 CFHR5Q9BXR6 569 aa15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 CD209Q9NNX6 404 aa15.1■□□□□ 0.01
CARMIL3-204ENST00000561354 COL1A1P02452 1464 aaPredicted RBP15.09■□□□□ 0.01
CARMIL3-204ENST00000561354 GPR25O00155 361 aa15.09■□□□□ 0.01
CARMIL3-204ENST00000561354 PTPN12Q05209 780 aaKnown RBP15.09■□□□□ 0.01
CARMIL3-204ENST00000561354 MTMR14Q8NCE2 650 aa15.09■□□□□ 0.01
CARMIL3-204ENST00000561354 HPS5Q9UPZ3 1129 aa15.09■□□□□ 0.01
CARMIL3-204ENST00000561354 IRS2Q9Y4H2 1338 aa15.09■□□□□ 0.01
CARMIL3-204ENST00000561354 CACNA1FO60840 1977 aa15.09■□□□□ 0.01
CARMIL3-204ENST00000561354 VAMP4O75379 141 aa15.08■□□□□ 0
CARMIL3-204ENST00000561354 FKBP1AP62942 108 aaKnown RBP15.07■□□□□ 0
CARMIL3-204ENST00000561354 FOXO4P98177 505 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 MKRN3Q13064 507 aaKnown RBP15.07■□□□□ 0
CARMIL3-204ENST00000561354 IFIT5Q13325 482 aaKnown RBP15.07■□□□□ 0
CARMIL3-204ENST00000561354 DLGAP5Q15398 846 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 MAP3K11Q16584 847 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 SPRYD7Q5W111 196 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 CERS5Q8N5B7 392 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 DEFB129Q9H1M3 183 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 ANGEL1Q9UNK9 670 aaKnown RBP15.07■□□□□ 0
CARMIL3-204ENST00000561354 PPP2R3BQ9Y5P8 575 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
CARMIL3-204ENST00000561354 TAF5LO75529 589 aa15.06■□□□□ 0
CARMIL3-204ENST00000561354 ALDH1A1P00352 501 aa15.06■□□□□ 0
CARMIL3-204ENST00000561354 IL1R1P14778 569 aa15.06■□□□□ 0
CARMIL3-204ENST00000561354 INHBEP58166 350 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms