RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 WDR90Q96KV7 1748 aa12.63□□□□□ -0.39
HERC1-212ENST00000561348 SHTN1A0MZ66 631 aa12.63□□□□□ -0.39
HERC1-212ENST00000561348 H7C1D1 291 aa12.63□□□□□ -0.39
HERC1-212ENST00000561348 SCNN1DP51172 638 aa12.63□□□□□ -0.39
HERC1-212ENST00000561348 RABL6Q3YEC7 729 aaPredicted RBP12.63□□□□□ -0.39
HERC1-212ENST00000561348 L3MBTL3Q96JM7 780 aaPredicted RBP12.63□□□□□ -0.39
HERC1-212ENST00000561348 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
HERC1-212ENST00000561348 JAG2Q9Y219 1238 aa12.63□□□□□ -0.39
HERC1-212ENST00000561348 SRGAP3O43295 1099 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 FRAT2O75474 233 aaPredicted RBP12.62□□□□□ -0.39
HERC1-212ENST00000561348 GNAI2P04899 355 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 RLBP1P12271 317 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 MAP1SQ66K74 1059 aaPredicted RBP12.62□□□□□ -0.39
HERC1-212ENST00000561348 PNMA8AQ86V59 439 aaPredicted RBP12.62□□□□□ -0.39
HERC1-212ENST00000561348 VPS37DQ86XT2 251 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 MICALL2Q8IY33 904 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 MXD3Q9BW11 206 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 BCL11AQ9H165 835 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 GPRC5DQ9NZD1 345 aa12.62□□□□□ -0.39
HERC1-212ENST00000561348 PA2G4Q9UQ80 394 aaKnown RBP12.62□□□□□ -0.39
HERC1-212ENST00000561348 MED23Q9ULK4 1368 aa12.61□□□□□ -0.39
HERC1-212ENST00000561348 GTF2IP78347 998 aa12.61□□□□□ -0.39
HERC1-212ENST00000561348 HTRA3P83110 453 aa12.61□□□□□ -0.39
HERC1-212ENST00000561348 TBC1D10BQ4KMP7 808 aaPredicted RBP12.61□□□□□ -0.39
HERC1-212ENST00000561348 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
HERC1-212ENST00000561348 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
HERC1-212ENST00000561348 IQSEC3Q9UPP2 1182 aaPredicted RBP12.61□□□□□ -0.39
HERC1-212ENST00000561348 MROH5Q6ZUA9 1318 aa12.61□□□□□ -0.39
HERC1-212ENST00000561348 SCN4AP35499 1836 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 LTBP1Q14766 1721 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 EYA2O00167 538 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 HSPA6P17066 643 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 GYG1P46976 350 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 FSTL1Q12841 308 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 PODNQ7Z5L7 613 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 LDHDQ86WU2 507 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 COA1Q9GZY4 146 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 ADARB2Q9NS39 739 aaKnown RBP12.6□□□□□ -0.39
HERC1-212ENST00000561348 COG6Q9Y2V7 657 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 RIPOR2Q9Y4F9 1068 aa12.6□□□□□ -0.39
HERC1-212ENST00000561348 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
HERC1-212ENST00000561348 MS4A1P11836 297 aa12.59□□□□□ -0.39
HERC1-212ENST00000561348 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
HERC1-212ENST00000561348 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
HERC1-212ENST00000561348 TTLL5Q6EMB2 1281 aa12.59□□□□□ -0.39
HERC1-212ENST00000561348 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
HERC1-212ENST00000561348 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.59□□□□□ -0.39
HERC1-212ENST00000561348 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
HERC1-212ENST00000561348 IFIT1P09914 478 aaKnown RBP12.58□□□□□ -0.4
HERC1-212ENST00000561348 HIBADHP31937 336 aaKnown RBP12.58□□□□□ -0.4
HERC1-212ENST00000561348 RFX5P48382 616 aaPredicted RBP12.58□□□□□ -0.4
HERC1-212ENST00000561348 CHAF1AQ13111 956 aaPredicted RBP12.58□□□□□ -0.4
HERC1-212ENST00000561348 UBE4AQ14139 1066 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 USP50Q70EL3 339 aaPredicted RBP12.58□□□□□ -0.4
HERC1-212ENST00000561348 KIAA0825Q8IV33 1275 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 CNTROBQ8N137 903 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 TRPM4Q8TD43 1214 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 CD209Q9NNX6 404 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 SCN9AQ15858 1988 aa12.58□□□□□ -0.4
HERC1-212ENST00000561348 PNMA6EA0A0J9YXQ4 647 aa12.57□□□□□ -0.4
HERC1-212ENST00000561348 PDE8BO95263 885 aa12.57□□□□□ -0.4
HERC1-212ENST00000561348 SLC5A1P13866 664 aa12.57□□□□□ -0.4
HERC1-212ENST00000561348 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
HERC1-212ENST00000561348 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.4
HERC1-212ENST00000561348 OGFOD1Q8N543 542 aa12.57□□□□□ -0.4
HERC1-212ENST00000561348 ZNF408Q9H9D4 720 aa12.57□□□□□ -0.4
HERC1-212ENST00000561348 EGFRP00533 1210 aa12.56□□□□□ -0.4
HERC1-212ENST00000561348 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
HERC1-212ENST00000561348 BCAMP50895 628 aa12.56□□□□□ -0.4
HERC1-212ENST00000561348 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
HERC1-212ENST00000561348 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
HERC1-212ENST00000561348 DPF2Q92785 391 aa12.56□□□□□ -0.4
HERC1-212ENST00000561348 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
HERC1-212ENST00000561348 TRAF5O00463 557 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 ZBTB7BO15156 539 aaPredicted RBP12.55□□□□□ -0.4
HERC1-212ENST00000561348 IL15P40933 162 aaPredicted RBP12.55□□□□□ -0.4
HERC1-212ENST00000561348 APLP1P51693 650 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 RBM5P52756 815 aaKnown RBP eCLIP12.55□□□□□ -0.4
HERC1-212ENST00000561348 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
HERC1-212ENST00000561348 FMR1Q06787 632 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■□□□ 12.9
HERC1-212ENST00000561348 TFCP2Q12800 502 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 DACT2Q5SW24 774 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 STRIP1Q5VSL9 837 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
HERC1-212ENST00000561348 ATG9AQ7Z3C6 839 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 FAM84BQ96KN1 310 aaPredicted RBP12.55□□□□□ -0.4
HERC1-212ENST00000561348 GLIS2Q9BZE0 524 aaPredicted RBP12.55□□□□□ -0.4
HERC1-212ENST00000561348 HDAC9Q9UKV0 1011 aa12.55□□□□□ -0.4
HERC1-212ENST00000561348 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
HERC1-212ENST00000561348 A0A1B0GUL6 1792 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms