RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 USP17L3A6NCW0 530 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 USP17L4A6NCW7 530 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 TAF5LO75529 589 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 CELF2O95319 508 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 DEFB115Q30KQ5 88 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 USP17L1Q7RTZ2 530 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 TRMT2AQ8IZ69 625 aaKnown RBP21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 AGBL3Q8NEM8 1001 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 HELBQ8NG08 1087 aaPredicted RBP21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 FBXW7Q969H0 707 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 SMC4Q9NTJ3 1288 aa21.74■■□□□ 1.07
CDC42BPB-208ENST00000561271 AKAP11Q9UKA4 1901 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 SNAP23O00161 211 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 CCDC57Q2TAC2 916 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 TAF7LQ5H9L4 462 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 DLK2Q6UY11 383 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 PAXIP1Q6ZW49 1069 aaPredicted RBP21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 CDC37L1Q7L3B6 337 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 KAZALD1Q96I82 304 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 GMLQ99445 158 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 MXD3Q9BW11 206 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 COA1Q9GZY4 146 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 UTYO14607 1347 aa21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 ASTN2O75129 1339 aaPredicted RBP21.73■■□□□ 1.07
CDC42BPB-208ENST00000561271 ZNF280AP59817 542 aaPredicted RBP21.72■■□□□ 1.07
CDC42BPB-208ENST00000561271 ALDH1L2Q3SY69 923 aa21.72■■□□□ 1.07
CDC42BPB-208ENST00000561271 USP48Q86UV5 1035 aa21.72■■□□□ 1.07
CDC42BPB-208ENST00000561271 GGA3Q9NZ52 723 aa21.72■■□□□ 1.07
CDC42BPB-208ENST00000561271 TLL2Q9Y6L7 1015 aa21.72■■□□□ 1.07
CDC42BPB-208ENST00000561271 ADM5C9JUS6 153 aa21.71■■□□□ 1.07
CDC42BPB-208ENST00000561271 DACT2Q5SW24 774 aa21.71■■□□□ 1.07
CDC42BPB-208ENST00000561271 KRT26Q7Z3Y9 468 aa21.71■■□□□ 1.07
CDC42BPB-208ENST00000561271 WDR33Q9C0J8 1336 aaKnown RBP21.71■■□□□ 1.07
CDC42BPB-208ENST00000561271 IRS2Q9Y4H2 1338 aa21.71■■□□□ 1.07
CDC42BPB-208ENST00000561271 USP17L8P0C7I0 530 aa21.7■■□□□ 1.06
CDC42BPB-208ENST00000561271 GRM1Q13255 1194 aa21.7■■□□□ 1.06
CDC42BPB-208ENST00000561271 DCPSQ96C86 337 aaKnown RBP21.7■■□□□ 1.06
CDC42BPB-208ENST00000561271 BICC1Q9H694 974 aaKnown RBP21.7■■□□□ 1.06
CDC42BPB-208ENST00000561271 CNNM1Q9NRU3 951 aa21.7■■□□□ 1.06
CDC42BPB-208ENST00000561271 PAPPA2Q9BXP8 1791 aa21.69■■□□□ 1.06
CDC42BPB-208ENST00000561271 COL13A1Q5TAT6 717 aaPredicted RBP21.69■■□□□ 1.06
CDC42BPB-208ENST00000561271 CYP4F22Q6NT55 531 aa21.69■■□□□ 1.06
CDC42BPB-208ENST00000561271 LDHAL6AQ6ZMR3 332 aa21.69■■□□□ 1.06
CDC42BPB-208ENST00000561271 CAPNS2Q96L46 248 aa21.69■■□□□ 1.06
CDC42BPB-208ENST00000561271 PLIN1O60240 522 aa21.68■■□□□ 1.06
CDC42BPB-208ENST00000561271 STRIP1Q5VSL9 837 aa21.68■■□□□ 1.06
CDC42BPB-208ENST00000561271 ANKRD44Q8N8A2 993 aa21.68■■□□□ 1.06
CDC42BPB-208ENST00000561271 MYOZ2Q9NPC6 264 aa21.68■■□□□ 1.06
CDC42BPB-208ENST00000561271 MYO3BQ8WXR4 1341 aa21.67■■□□□ 1.06
CDC42BPB-208ENST00000561271 ANGEL2Q5VTE6 544 aaKnown RBP21.67■■□□□ 1.06
CDC42BPB-208ENST00000561271 SAPCD2Q86UD0 394 aa21.67■■□□□ 1.06
CDC42BPB-208ENST00000561271 FOXN1O15353 648 aa21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 CT47B1P0C2W7 299 aaPredicted RBP21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 GTF2IP78347 998 aa21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 SCARF1Q14162 830 aa21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 RABL6Q3YEC7 729 aaPredicted RBP21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 IFFO2Q5TF58 517 aa21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 SULF1Q8IWU6 871 aa21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 MIER1Q8N108 512 aa21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 PUS3Q9BZE2 481 aaKnown RBP21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 CD209Q9NNX6 404 aa21.66■■□□□ 1.06
CDC42BPB-208ENST00000561271 CASP8AP2Q9UKL3 1982 aa21.65■■□□□ 1.06
CDC42BPB-208ENST00000561271 ECE1P42892 770 aa21.65■■□□□ 1.06
CDC42BPB-208ENST00000561271 DIEXFQ68CQ4 756 aaKnown RBP21.65■■□□□ 1.06
CDC42BPB-208ENST00000561271 TTLL5Q6EMB2 1281 aa21.65■■□□□ 1.06
CDC42BPB-208ENST00000561271 C15orf52Q6ZUT6 534 aaKnown RBP21.65■■□□□ 1.06
CDC42BPB-208ENST00000561271 USP44Q9H0E7 712 aa21.65■■□□□ 1.06
CDC42BPB-208ENST00000561271 ZNF804AQ7Z570 1209 aa21.64■■□□□ 1.05
CDC42BPB-208ENST00000561271 KIAA0825Q8IV33 1275 aa21.64■■□□□ 1.05
CDC42BPB-208ENST00000561271 AIDAQ96BJ3 306 aa21.64■■□□□ 1.05
CDC42BPB-208ENST00000561271 SASH1O94885 1247 aa21.63■■□□□ 1.05
CDC42BPB-208ENST00000561271 WBP1LQ9NX94 342 aa21.63■■□□□ 1.05
CDC42BPB-208ENST00000561271 NOB1Q9ULX3 412 aaKnown RBP21.63■■□□□ 1.05
CDC42BPB-208ENST00000561271 SCAF8Q9UPN6 1271 aaKnown RBP21.63■■□□□ 1.05
CDC42BPB-208ENST00000561271 AOC2O75106 756 aa21.62■■□□□ 1.05
CDC42BPB-208ENST00000561271 NBPF9Q3BBW0 867 aa21.62■■□□□ 1.05
CDC42BPB-208ENST00000561271 OGFOD1Q8N543 542 aa21.62■■□□□ 1.05
CDC42BPB-208ENST00000561271 KLHDC4Q8TBB5 520 aa21.62■■□□□ 1.05
CDC42BPB-208ENST00000561271 CDCA5Q96FF9 252 aa21.62■■□□□ 1.05
CDC42BPB-208ENST00000561271 GBA2Q9HCG7 927 aaPredicted RBP21.62■■□□□ 1.05
CDC42BPB-208ENST00000561271 JAG2Q9Y219 1238 aa21.62■■□□□ 1.05
CDC42BPB-208ENST00000561271 OTOFQ9HC10 1997 aa21.61■■□□□ 1.05
CDC42BPB-208ENST00000561271 PITPNM2Q9BZ72 1349 aa21.61■■□□□ 1.05
CDC42BPB-208ENST00000561271 IL1R1P14778 569 aa21.61■■□□□ 1.05
CDC42BPB-208ENST00000561271 HUNKP57058 714 aa21.61■■□□□ 1.05
CDC42BPB-208ENST00000561271 CERS5Q8N5B7 392 aa21.61■■□□□ 1.05
CDC42BPB-208ENST00000561271 HHIPL1Q96JK4 782 aa21.61■■□□□ 1.05
CDC42BPB-208ENST00000561271 RARSP54136 660 aaKnown RBP21.6■■□□□ 1.05
CDC42BPB-208ENST00000561271 LRRC24Q50LG9 513 aa21.6■■□□□ 1.05
CDC42BPB-208ENST00000561271 RIPOR2Q9Y4F9 1068 aa21.6■■□□□ 1.05
CDC42BPB-208ENST00000561271 MROH5Q6ZUA9 1318 aa21.59■■□□□ 1.05
CDC42BPB-208ENST00000561271 WNT10BO00744 389 aa21.59■■□□□ 1.05
CDC42BPB-208ENST00000561271 GYG1P46976 350 aa21.59■■□□□ 1.05
CDC42BPB-208ENST00000561271 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
CDC42BPB-208ENST00000561271 MAP2K1Q02750 393 aaPredicted RBP21.59■■□□□ 1.05
CDC42BPB-208ENST00000561271 UBE4AQ14139 1066 aa21.59■■□□□ 1.05
CDC42BPB-208ENST00000561271 API5Q9BZZ5 524 aaKnown RBP21.59■■□□□ 1.05
CDC42BPB-208ENST00000561271 KIF16BQ96L93 1317 aa21.58■■□□□ 1.05
CDC42BPB-208ENST00000561271 CTCFP49711 727 aaPredicted RBP21.58■■□□□ 1.05
CDC42BPB-208ENST00000561271 METTL24Q5JXM2 366 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms