RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 F6X3S4 739 aa34.53■■■■□ 3.12
SNRPA1-215ENST00000561187 ANGEL2Q5VTE6 544 aaKnown RBP34.53■■■■□ 3.12
SNRPA1-215ENST00000561187 WDR63Q8IWG1 891 aa34.53■■■■□ 3.12
SNRPA1-215ENST00000561187 CASP7P55210 303 aa34.52■■■■□ 3.12
SNRPA1-215ENST00000561187 SCARF1Q14162 830 aa34.52■■■■□ 3.12
SNRPA1-215ENST00000561187 KLRK1P26718 216 aa34.51■■■■□ 3.12
SNRPA1-215ENST00000561187 ZNF280AP59817 542 aaPredicted RBP34.51■■■■□ 3.12
SNRPA1-215ENST00000561187 PODNQ7Z5L7 613 aa34.51■■■■□ 3.12
SNRPA1-215ENST00000561187 ZNF609O15014 1411 aa34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 USP17L8P0C7I0 530 aa34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 NCBP3Q53F19 620 aaKnown RBP34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 TXNRD3Q86VQ6 643 aa34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 C2orf69Q8N8R5 385 aa34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 LINS1Q8NG48 757 aa34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 PLA2G12BQ9BX93 195 aa34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 MYOZ2Q9NPC6 264 aa34.5■■■■□ 3.11
SNRPA1-215ENST00000561187 CDCA5Q96FF9 252 aa34.49■■■■□ 3.11
SNRPA1-215ENST00000561187 GMLQ99445 158 aa34.49■■■■□ 3.11
SNRPA1-215ENST00000561187 MPHOSPH8Q99549 860 aa34.49■■■■□ 3.11
SNRPA1-215ENST00000561187 CACNA1FO60840 1977 aa34.49■■■■□ 3.11
SNRPA1-215ENST00000561187 BRPF1P55201 1214 aaPredicted RBP34.48■■■■□ 3.11
SNRPA1-215ENST00000561187 CHMP3Q9Y3E7 222 aa34.48■■■■□ 3.11
SNRPA1-215ENST00000561187 RGMBQ6NW40 437 aa34.47■■■■□ 3.11
SNRPA1-215ENST00000561187 NOGQ13253 232 aa34.46■■■■□ 3.11
SNRPA1-215ENST00000561187 ZNF646O15015 1829 aaPredicted RBP34.46■■■■□ 3.11
SNRPA1-215ENST00000561187 ABHD8Q96I13 439 aa34.45■■■■□ 3.11
SNRPA1-215ENST00000561187 ZNF804BA4D1E1 1349 aa34.45■■■■□ 3.11
SNRPA1-215ENST00000561187 KCNJ4P48050 445 aa34.44■■■■□ 3.1
SNRPA1-215ENST00000561187 ZNF157P51786 506 aaPredicted RBP34.44■■■■□ 3.1
SNRPA1-215ENST00000561187 DACT2Q5SW24 774 aa34.44■■■■□ 3.1
SNRPA1-215ENST00000561187 SNAP23O00161 211 aa34.43■■■■□ 3.1
SNRPA1-215ENST00000561187 CSF1RP07333 972 aa34.43■■■■□ 3.1
SNRPA1-215ENST00000561187 CHRNDQ07001 517 aa34.43■■■■□ 3.1
SNRPA1-215ENST00000561187 COA1Q9GZY4 146 aa34.43■■■■□ 3.1
SNRPA1-215ENST00000561187 LEMD3Q9Y2U8 911 aa34.43■■■■□ 3.1
SNRPA1-215ENST00000561187 ANKRD18BA2A2Z9 1011 aa34.42■■■■□ 3.1
SNRPA1-215ENST00000561187 FAM155AB1AL88 458 aaPredicted RBP34.42■■■■□ 3.1
SNRPA1-215ENST00000561187 NBPF9Q3BBW0 867 aa34.42■■■■□ 3.1
SNRPA1-215ENST00000561187 CASP8AP2Q9UKL3 1982 aa34.42■■■■□ 3.1
SNRPA1-215ENST00000561187 BEND3Q5T5X7 828 aa34.41■■■■□ 3.1
SNRPA1-215ENST00000561187 PRAMEF18Q5VWM3 479 aa34.41■■■■□ 3.1
SNRPA1-215ENST00000561187 HELBQ8NG08 1087 aaPredicted RBP34.41■■■■□ 3.1
SNRPA1-215ENST00000561187 ANKRD2Q9GZV1 360 aa34.41■■■■□ 3.1
SNRPA1-215ENST00000561187 CA12O43570 354 aa34.39■■■■□ 3.1
SNRPA1-215ENST00000561187 TAF5LO75529 589 aa34.39■■■■□ 3.1
SNRPA1-215ENST00000561187 SASH1O94885 1247 aa34.39■■■■□ 3.1
SNRPA1-215ENST00000561187 FOXO4P98177 505 aa34.38■■■■□ 3.09
SNRPA1-215ENST00000561187 STRIP1Q5VSL9 837 aa34.38■■■■□ 3.09
SNRPA1-215ENST00000561187 A0A1B0GUL6 1792 aa34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 KIF23Q02241 960 aaPredicted RBP34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 IFIT5Q13325 482 aaKnown RBP34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 EPHA10Q5JZY3 1008 aa34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 SLC4A10Q6U841 1118 aa34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 MOB2Q70IA6 237 aa34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 KIAA0825Q8IV33 1275 aa34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 OGFOD1Q8N543 542 aa34.37■■■■□ 3.09
SNRPA1-215ENST00000561187 GTF2IP78347 998 aa34.36■■■■□ 3.09
SNRPA1-215ENST00000561187 TTLL5Q6EMB2 1281 aa34.36■■■■□ 3.09
SNRPA1-215ENST00000561187 MYO3BQ8WXR4 1341 aa34.35■■■■□ 3.09
SNRPA1-215ENST00000561187 PITPNM2Q9BZ72 1349 aa34.35■■■■□ 3.09
SNRPA1-215ENST00000561187 LMBR1LQ6UX01 489 aa34.35■■■■□ 3.09
SNRPA1-215ENST00000561187 CCDC102AQ96A19 550 aa34.35■■■■□ 3.09
SNRPA1-215ENST00000561187 ZNF594Q96JF6 807 aaPredicted RBP34.35■■■■□ 3.09
SNRPA1-215ENST00000561187 PAPPA2Q9BXP8 1791 aa34.34■■■■□ 3.09
SNRPA1-215ENST00000561187 SLC10A3P09131 477 aa34.34■■■■□ 3.09
SNRPA1-215ENST00000561187 WNT10BO00744 389 aa34.33■■■■□ 3.09
SNRPA1-215ENST00000561187 GRM8O00222 908 aa34.32■■■■□ 3.08
SNRPA1-215ENST00000561187 PLIN1O60240 522 aa34.32■■■■□ 3.08
SNRPA1-215ENST00000561187 TAF7LQ5H9L4 462 aa34.32■■■■□ 3.08
SNRPA1-215ENST00000561187 RASAL3Q86YV0 1011 aa34.32■■■■□ 3.08
SNRPA1-215ENST00000561187 CCDC85CA6NKD9 419 aa34.31■■■■□ 3.08
SNRPA1-215ENST00000561187 TTLL12Q14166 644 aaPredicted RBP34.31■■■■□ 3.08
SNRPA1-215ENST00000561187 CD209Q9NNX6 404 aa34.31■■■■□ 3.08
SNRPA1-215ENST00000561187 C9orf78Q9NZ63 289 aaPredicted RBP34.31■■■■□ 3.08
SNRPA1-215ENST00000561187 JAG2Q9Y219 1238 aa34.31■■■■□ 3.08
SNRPA1-215ENST00000561187 MCOLN1Q9GZU1 580 aa34.29■■■■□ 3.08
SNRPA1-215ENST00000561187 UBE2Q2LH0YL09 131 aa34.28■■■■□ 3.08
SNRPA1-215ENST00000561187 TRPA1O75762 1119 aa34.28■■■■□ 3.08
SNRPA1-215ENST00000561187 CCDC57Q2TAC2 916 aa34.28■■■■□ 3.08
SNRPA1-215ENST00000561187 HDAC9Q9UKV0 1011 aa34.28■■■■□ 3.08
SNRPA1-215ENST00000561187 IRS2Q9Y4H2 1338 aa34.28■■■■□ 3.08
SNRPA1-215ENST00000561187 F8W031 263 aaPredicted RBP34.27■■■■□ 3.08
SNRPA1-215ENST00000561187 CNNM1Q9NRU3 951 aa34.27■■■■□ 3.08
SNRPA1-215ENST00000561187 DGKZQ13574 1117 aa34.26■■■■□ 3.08
SNRPA1-215ENST00000561187 PRKG1Q13976 671 aa34.26■■■■□ 3.08
SNRPA1-215ENST00000561187 SRCIN1Q9C0H9 1055 aa34.26■■■■□ 3.08
SNRPA1-215ENST00000561187 RNF186Q9NXI6 227 aa34.26■■■■□ 3.08
SNRPA1-215ENST00000561187 FKBP1BP68106 108 aa34.25■■■■□ 3.07
SNRPA1-215ENST00000561187 LDHAL6AQ6ZMR3 332 aa34.25■■■■□ 3.07
SNRPA1-215ENST00000561187 CERS5Q8N5B7 392 aa34.25■■■■□ 3.07
SNRPA1-215ENST00000561187 SUCLG2Q96I99 432 aa34.25■■■■□ 3.07
SNRPA1-215ENST00000561187 CSRNP1Q96S65 589 aa34.25■■■■□ 3.07
SNRPA1-215ENST00000561187 AKAP11Q9UKA4 1901 aa34.25■■■■□ 3.07
SNRPA1-215ENST00000561187 ZNF804AQ7Z570 1209 aa34.24■■■■□ 3.07
SNRPA1-215ENST00000561187 PCDHAC2Q9Y5I4 1007 aa34.24■■■■□ 3.07
SNRPA1-215ENST00000561187 ALDH1L1O75891 902 aa34.23■■■■□ 3.07
SNRPA1-215ENST00000561187 MKRN3Q13064 507 aaKnown RBP34.23■■■■□ 3.07
SNRPA1-215ENST00000561187 ZNF521Q96K83 1311 aa34.23■■■■□ 3.07
SNRPA1-215ENST00000561187 NF2P35240 595 aa34.21■■■■□ 3.07
SNRPA1-215ENST00000561187 SAGE1Q9NXZ1 904 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms