RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 WDR43Q15061 677 aaKnown RBP eCLIP23.97■■□□□ 1.43
TPM1-226ENST00000560959 STRIP1Q5VSL9 837 aa23.97■■□□□ 1.43
TPM1-226ENST00000560959 MYBBP1AQ9BQG0 1328 aaKnown RBP23.97■■□□□ 1.43
TPM1-226ENST00000560959 DDX58O95786 925 aaKnown RBP23.96■■□□□ 1.43
TPM1-226ENST00000560959 COA1Q9GZY4 146 aa23.96■■□□□ 1.43
TPM1-226ENST00000560959 MINPP1Q9UNW1 487 aa23.96■■□□□ 1.43
TPM1-226ENST00000560959 FKTNO75072 461 aa23.95■■□□□ 1.42
TPM1-226ENST00000560959 TTLL12Q14166 644 aaPredicted RBP23.95■■□□□ 1.42
TPM1-226ENST00000560959 PRAMEF18Q5VWM3 479 aa23.95■■□□□ 1.42
TPM1-226ENST00000560959 IFT57Q9NWB7 429 aa23.95■■□□□ 1.42
TPM1-226ENST00000560959 ADAMTS8Q9UP79 889 aa23.95■■□□□ 1.42
TPM1-226ENST00000560959 ALDH1A1P00352 501 aa23.94■■□□□ 1.42
TPM1-226ENST00000560959 CTSWP56202 376 aa23.94■■□□□ 1.42
TPM1-226ENST00000560959 CALD1Q05682 793 aaKnown RBP23.94■■□□□ 1.42
TPM1-226ENST00000560959 ARMC9Q7Z3E5 817 aa23.94■■□□□ 1.42
TPM1-226ENST00000560959 CCDC85AQ96PX6 553 aaPredicted RBP23.94■■□□□ 1.42
TPM1-226ENST00000560959 SCAF8Q9UPN6 1271 aaKnown RBP23.94■■□□□ 1.42
TPM1-226ENST00000560959 INHBEP58166 350 aa23.93■■□□□ 1.42
TPM1-226ENST00000560959 GNAI1P63096 354 aa23.93■■□□□ 1.42
TPM1-226ENST00000560959 LDLRAD1Q5T700 205 aa23.93■■□□□ 1.42
TPM1-226ENST00000560959 TTLL11Q8NHH1 800 aa23.93■■□□□ 1.42
TPM1-226ENST00000560959 GCC1Q96CN9 775 aa23.93■■□□□ 1.42
TPM1-226ENST00000560959 CCT4P50991 539 aaKnown RBP23.92■■□□□ 1.42
TPM1-226ENST00000560959 JARID2Q92833 1246 aaPredicted RBP23.92■■□□□ 1.42
TPM1-226ENST00000560959 LEMD3Q9Y2U8 911 aa23.92■■□□□ 1.42
TPM1-226ENST00000560959 WTIPA6NIX2 430 aaPredicted RBP23.91■■□□□ 1.42
TPM1-226ENST00000560959 PTPN12Q05209 780 aaKnown RBP23.91■■□□□ 1.42
TPM1-226ENST00000560959 CCDC30Q5VVM6 783 aa23.91■■□□□ 1.42
TPM1-226ENST00000560959 APOBEC3FQ8IUX4 373 aaKnown RBP23.91■■□□□ 1.42
TPM1-226ENST00000560959 SPRYD7Q5W111 196 aa23.9■■□□□ 1.42
TPM1-226ENST00000560959 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
TPM1-226ENST00000560959 TTLL5Q6EMB2 1281 aa23.89■■□□□ 1.41
TPM1-226ENST00000560959 ZBED3Q96IU2 234 aaPredicted RBP23.89■■□□□ 1.41
TPM1-226ENST00000560959 MXD3Q9BW11 206 aa23.89■■□□□ 1.41
TPM1-226ENST00000560959 UNCXA6NJT0 531 aa23.88■■□□□ 1.41
TPM1-226ENST00000560959 INTS3Q68E01 1043 aaKnown RBP23.88■■□□□ 1.41
TPM1-226ENST00000560959 KSR2Q6VAB6 950 aa23.88■■□□□ 1.41
TPM1-226ENST00000560959 GREM2Q9H772 168 aa23.88■■□□□ 1.41
TPM1-226ENST00000560959 MAP3K2Q9Y2U5 619 aa23.88■■□□□ 1.41
TPM1-226ENST00000560959 MANSC4A6NHS7 340 aaPredicted RBP23.87■■□□□ 1.41
TPM1-226ENST00000560959 IGKV5-2P06315 115 aa23.87■■□□□ 1.41
TPM1-226ENST00000560959 MKRN3Q13064 507 aaKnown RBP23.87■■□□□ 1.41
TPM1-226ENST00000560959 MAP3K11Q16584 847 aa23.87■■□□□ 1.41
TPM1-226ENST00000560959 R3HDMLQ9H3Y0 253 aa23.87■■□□□ 1.41
TPM1-226ENST00000560959 C8orf58Q8NAV2 365 aa23.86■■□□□ 1.41
TPM1-226ENST00000560959 ANKRD2Q9GZV1 360 aa23.86■■□□□ 1.41
TPM1-226ENST00000560959 SASH1O94885 1247 aa23.85■■□□□ 1.41
TPM1-226ENST00000560959 IGHMBP2P38935 993 aaKnown RBP23.85■■□□□ 1.41
TPM1-226ENST00000560959 NEXNQ0ZGT2 675 aa23.85■■□□□ 1.41
TPM1-226ENST00000560959 TXNRD3Q86VQ6 643 aa23.85■■□□□ 1.41
TPM1-226ENST00000560959 FBXW7Q969H0 707 aa23.85■■□□□ 1.41
TPM1-226ENST00000560959 ANGEL1Q9UNK9 670 aaKnown RBP23.85■■□□□ 1.41
TPM1-226ENST00000560959 COL1A1P02452 1464 aaPredicted RBP23.85■■□□□ 1.41
TPM1-226ENST00000560959 PI4KAP2A4QPH2 592 aa23.84■■□□□ 1.41
TPM1-226ENST00000560959 ZBTB48P10074 688 aaPredicted RBP23.84■■□□□ 1.41
TPM1-226ENST00000560959 IFNL1Q8IU54 200 aa23.84■■□□□ 1.41
TPM1-226ENST00000560959 PI4KAP1Q8N8J0 262 aa23.84■■□□□ 1.41
TPM1-226ENST00000560959 SLC10A4Q96EP9 437 aa23.84■■□□□ 1.41
TPM1-226ENST00000560959 PPP2R3BQ9Y5P8 575 aa23.84■■□□□ 1.41
TPM1-226ENST00000560959 ZNF804BA4D1E1 1349 aa23.84■■□□□ 1.41
TPM1-226ENST00000560959 H7C1W4 665 aa23.83■■□□□ 1.41
TPM1-226ENST00000560959 KIAA0825Q8IV33 1275 aa23.83■■□□□ 1.41
TPM1-226ENST00000560959 MTMR14Q8NCE2 650 aa23.83■■□□□ 1.41
TPM1-226ENST00000560959 DEFB129Q9H1M3 183 aa23.83■■□□□ 1.41
TPM1-226ENST00000560959 PRKG1Q13976 671 aa23.82■■□□□ 1.4
TPM1-226ENST00000560959 PLA2G12BQ9BX93 195 aa23.82■■□□□ 1.4
TPM1-226ENST00000560959 APAF1O14727 1248 aa23.81■■□□□ 1.4
TPM1-226ENST00000560959 PPP1R12BO60237 982 aaPredicted RBP23.81■■□□□ 1.4
TPM1-226ENST00000560959 GTF2IP78347 998 aa23.81■■□□□ 1.4
TPM1-226ENST00000560959 TRIM17Q9Y577 477 aa23.81■■□□□ 1.4
TPM1-226ENST00000560959 ZNF646O15015 1829 aaPredicted RBP23.8■■□□□ 1.4
TPM1-226ENST00000560959 NEURL1BA8MQ27 555 aa23.8■■□□□ 1.4
TPM1-226ENST00000560959 DLGAP5Q15398 846 aa23.8■■□□□ 1.4
TPM1-226ENST00000560959 OTOP1Q7RTM1 612 aa23.8■■□□□ 1.4
TPM1-226ENST00000560959 MKI67P46013 3256 aaKnown RBP23.79■■□□□ 1.4
TPM1-226ENST00000560959 SUPT20HL1Q3ZLR7 823 aa23.79■■□□□ 1.4
TPM1-226ENST00000560959 C15orf52Q6ZUT6 534 aaKnown RBP23.79■■□□□ 1.4
TPM1-226ENST00000560959 MPHOSPH8Q99549 860 aa23.79■■□□□ 1.4
TPM1-226ENST00000560959 CD209Q9NNX6 404 aa23.79■■□□□ 1.4
TPM1-226ENST00000560959 HTTP42858 3142 aa23.78■■□□□ 1.4
TPM1-226ENST00000560959 CSF1RP07333 972 aa23.78■■□□□ 1.4
TPM1-226ENST00000560959 ITGA6P23229 1130 aa23.78■■□□□ 1.4
TPM1-226ENST00000560959 CWF19L2Q2TBE0 894 aaKnown RBP23.78■■□□□ 1.4
TPM1-226ENST00000560959 OTUD7BQ6GQQ9 843 aa23.78■■□□□ 1.4
TPM1-226ENST00000560959 ERO1AQ96HE7 468 aa23.78■■□□□ 1.4
TPM1-226ENST00000560959 WNK4Q96J92 1243 aa23.78■■□□□ 1.4
TPM1-226ENST00000560959 DDX10Q13206 875 aaKnown RBP23.77■■□□□ 1.4
TPM1-226ENST00000560959 HABP4Q5JVS0 413 aaKnown RBP23.77■■□□□ 1.4
TPM1-226ENST00000560959 UBE3BQ7Z3V4 1068 aa23.77■■□□□ 1.4
TPM1-226ENST00000560959 TSPYL6Q8N831 410 aa23.77■■□□□ 1.4
TPM1-226ENST00000560959 STK31Q9BXU1 1019 aa23.77■■□□□ 1.4
TPM1-226ENST00000560959 IGF2BP3O00425 579 aaKnown RBP eCLIP23.76■■□□□ 1.39
TPM1-226ENST00000560959 MYO1BO43795 1136 aa23.76■■□□□ 1.39
TPM1-226ENST00000560959 KLRK1P26718 216 aa23.76■■□□□ 1.39
TPM1-226ENST00000560959 FKBP1AP62942 108 aaKnown RBP23.76■■□□□ 1.39
TPM1-226ENST00000560959 PTPN22Q9Y2R2 807 aa23.76■■□□□ 1.39
TPM1-226ENST00000560959 POTEFA5A3E0 1075 aa23.75■■□□□ 1.39
TPM1-226ENST00000560959 KCNJ4P48050 445 aa23.75■■□□□ 1.39
TPM1-226ENST00000560959 CHRNDQ07001 517 aa23.75■■□□□ 1.39
TPM1-226ENST00000560959 GCKRQ14397 625 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms