RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
RABGGTA-217ENST00000560521 ARMC9Q7Z3E5 817 aa11.69□□□□□ -0.54
RABGGTA-217ENST00000560521 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
RABGGTA-217ENST00000560521 XDHP47989 1333 aa11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 CHL1O00533 1208 aa11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 ATP2B4P23634 1241 aa11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 INHBEP58166 350 aa11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 CAP1Q01518 475 aa11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 ZBTB38Q8NAP3 1195 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 ARMC5Q96C12 935 aa11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 ANGEL1Q9UNK9 670 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-217ENST00000560521 A0A1B0GUL6 1792 aa11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 MANSC4A6NHS7 340 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 SASH1O94885 1247 aa11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 TMPOP42166 694 aaKnown RBP11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 OGFOD1Q8N543 542 aa11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 JARID2Q92833 1246 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 SLC10A4Q96EP9 437 aa11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 ZBED3Q96IU2 234 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-217ENST00000560521 PDE8AO60658 829 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 MAP3K11Q16584 847 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 CCDC152Q4G0S7 254 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 STRIP1Q5VSL9 837 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 ANKRD18AQ8IVF6 992 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 ERO1AQ96HE7 468 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 WNK4Q96J92 1243 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 CLMNQ96JQ2 1002 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 MED23Q9ULK4 1368 aa11.66□□□□□ -0.54
RABGGTA-217ENST00000560521 PCCAP05165 728 aaPredicted RBP11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 ZBTB48P10074 688 aaPredicted RBP11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 CRHR2Q13324 411 aa11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 TXNRD3Q86VQ6 643 aa11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 APOBEC3FQ8IUX4 373 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 EFCC1Q9HA90 598 aa11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 SSC5DA1L4H1 1573 aa11.65□□□□□ -0.54
RABGGTA-217ENST00000560521 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 HOXB7P09629 217 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 MMP14P50281 582 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 LMOD3Q0VAK6 560 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 NEUROD2Q15784 382 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 MYD88Q99836 296 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 PTPN18Q99952 460 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 MINPP1Q9UNW1 487 aa11.64□□□□□ -0.55
RABGGTA-217ENST00000560521 COL1A1P02452 1464 aaPredicted RBP11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 GJA5P36382 358 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 SP3Q02447 781 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 TTLL5Q6EMB2 1281 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 CCDC191Q8NCU4 936 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 ZNF333Q96JL9 665 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 COA1Q9GZY4 146 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 DEFB129Q9H1M3 183 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
RABGGTA-217ENST00000560521 MGAMO43451 1857 aa11.62□□□□□ -0.55
RABGGTA-217ENST00000560521 H0YGN5 161 aa11.62□□□□□ -0.55
RABGGTA-217ENST00000560521 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
RABGGTA-217ENST00000560521 BSDC1Q9NW68 430 aaPredicted RBP11.62□□□□□ -0.55
RABGGTA-217ENST00000560521 PCDHAC2Q9Y5I4 1007 aa11.62□□□□□ -0.55
RABGGTA-217ENST00000560521 TESPA1A2RU30 521 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-217ENST00000560521 PPP1R12BO60237 982 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-217ENST00000560521 USP2O75604 605 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-217ENST00000560521 OTUD7BQ6GQQ9 843 aa11.61□□□□□ -0.55
RABGGTA-217ENST00000560521 TTLL11Q8NHH1 800 aa11.61□□□□□ -0.55
RABGGTA-217ENST00000560521 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
RABGGTA-217ENST00000560521 CWC25Q9NXE8 425 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-217ENST00000560521 CACNA1FO60840 1977 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 UNCXA6NJT0 531 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 DLL1O00548 723 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 KLRK1P26718 216 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 GTF2IP78347 998 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 NBPF12Q5TAG4 269 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 NBPF11Q86T75 865 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 GREM2Q9H772 168 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 LEMD3Q9Y2U8 911 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 PTCH2Q9Y6C5 1203 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 ARAP2Q8WZ64 1704 aa11.6□□□□□ -0.55
RABGGTA-217ENST00000560521 ALPK3Q96L96 1907 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 CTSWP56202 376 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 DLGAP5Q15398 846 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 SLC4A8Q2Y0W8 1093 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 SLC9C1Q4G0N8 1177 aa11.59□□□□□ -0.55
RABGGTA-217ENST00000560521 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms