RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 CCDC88AQ3V6T2 1871 aa10.12□□□□□ -0.79
LRRC28-219ENST00000560483 ABCC4O15439 1325 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 PDE8AO60658 829 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 PCCAP05165 728 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-219ENST00000560483 LMNB1P20700 586 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 TRIM28Q13263 835 aaKnown RBP10.11□□□□□ -0.79
LRRC28-219ENST00000560483 CCDC152Q4G0S7 254 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 SLC10A5Q5PT55 438 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 TYW1BQ6NUM6 668 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 OLFM4Q6UX06 510 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 RTKN2Q8IZC4 609 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 FRAT1Q92837 279 aaPredicted RBP10.11□□□□□ -0.79
LRRC28-219ENST00000560483 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
LRRC28-219ENST00000560483 KLRG2A4D1S0 409 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-219ENST00000560483 IGKV5-2P06315 115 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 CT47B1P0C2W7 299 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-219ENST00000560483 GRAPQ13588 217 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 GCKRQ14397 625 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 ALDH1L2Q3SY69 923 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 CRY2Q49AN0 593 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 ZNF784Q8NCA9 323 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-219ENST00000560483 LINS1Q8NG48 757 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 GRAPLQ8TC17 118 aaPredicted RBP10.1□□□□□ -0.79
LRRC28-219ENST00000560483 CRAMP1Q96RY5 1269 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 LAMB2P55268 1798 aa10.1□□□□□ -0.79
LRRC28-219ENST00000560483 PTPRCP08575 1304 aa10.09□□□□□ -0.79
LRRC28-219ENST00000560483 ZBED9Q6R2W3 1325 aa10.09□□□□□ -0.79
LRRC28-219ENST00000560483 TAF1P21675 1872 aa10.09□□□□□ -0.79
LRRC28-219ENST00000560483 BBOX1O75936 387 aa10.09□□□□□ -0.79
LRRC28-219ENST00000560483 TAF7LQ5H9L4 462 aa10.09□□□□□ -0.79
LRRC28-219ENST00000560483 DPP8Q6V1X1 898 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-219ENST00000560483 ZNF277Q9NRM2 450 aaPredicted RBP10.09□□□□□ -0.79
LRRC28-219ENST00000560483 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
LRRC28-219ENST00000560483 DDX60Q8IY21 1712 aaKnown RBP10.09□□□□□ -0.79
LRRC28-219ENST00000560483 RIC1Q4ADV7 1423 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 MYH3P11055 1940 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 NFKBIEO00221 500 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 HOXA10P31260 410 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-219ENST00000560483 CTSWP56202 376 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 FKBP4Q02790 459 aaKnown RBP eCLIP10.08□□□□□ -0.8
LRRC28-219ENST00000560483 C6orf132Q5T0Z8 1188 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 CC2D2BQ6DHV5 1058 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 ANKRD18AQ8IVF6 992 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 C16orf71Q8IYS4 520 aaPredicted RBP10.08□□□□□ -0.8
LRRC28-219ENST00000560483 JDP2Q8WYK2 163 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 CDC5LQ99459 802 aaKnown RBP10.08□□□□□ -0.8
LRRC28-219ENST00000560483 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
LRRC28-219ENST00000560483 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 NSFL1CQ9UNZ2 370 aaKnown RBP10.08□□□□□ -0.8
LRRC28-219ENST00000560483 SBF1O95248 1867 aa10.08□□□□□ -0.8
LRRC28-219ENST00000560483 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 GRM8O00222 908 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 DPYSL4O14531 572 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 IPO8O15397 1037 aaKnown RBP10.07□□□□□ -0.8
LRRC28-219ENST00000560483 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 IGHMBP2P38935 993 aaKnown RBP10.07□□□□□ -0.8
LRRC28-219ENST00000560483 SF3B3Q15393 1217 aaKnown RBP10.07□□□□□ -0.8
LRRC28-219ENST00000560483 BEND3Q5T5X7 828 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 TRMT2AQ8IZ69 625 aaKnown RBP10.07□□□□□ -0.8
LRRC28-219ENST00000560483 LARGE2Q8N3Y3 721 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 MPNDQ8N594 471 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 SUPT20HQ8NEM7 779 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 CELF1Q92879 486 aaKnown RBP10.07□□□□□ -0.8
LRRC28-219ENST00000560483 MPHOSPH8Q99549 860 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 API5Q9BZZ5 524 aaKnown RBP10.07□□□□□ -0.8
LRRC28-219ENST00000560483 SEC31BQ9NQW1 1179 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 ATP6V0A2Q9Y487 856 aa10.07□□□□□ -0.8
LRRC28-219ENST00000560483 FER1L6Q2WGJ9 1857 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 TRIM6-TRIM34B2RNG4 842 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 C3orf80F5H4A9 247 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 PPIP5K2O43314 1243 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 IARSP41252 1262 aaKnown RBP10.06□□□□□ -0.8
LRRC28-219ENST00000560483 RARSP54136 660 aaKnown RBP10.06□□□□□ -0.8
LRRC28-219ENST00000560483 RPS8P62241 208 aaKnown RBP10.06□□□□□ -0.8
LRRC28-219ENST00000560483 GRIPAP1Q4V328 841 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 TMC4Q7Z404 712 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 FTSJ3Q8IY81 847 aaKnown RBP10.06□□□□□ -0.8
LRRC28-219ENST00000560483 NIM1KQ8IY84 436 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 FBXW7Q969H0 707 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 GREM2Q9H772 168 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
LRRC28-219ENST00000560483 SPEF2Q9C093 1822 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 TIAM2Q8IVF5 1701 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 ANKRD18BA2A2Z9 1011 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 H7C1W4 665 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 BCAR3O75815 825 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 KCNJ4P48050 445 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 CCT4P50991 539 aaKnown RBP10.05□□□□□ -0.8
LRRC28-219ENST00000560483 EIF6P56537 245 aaKnown RBP10.05□□□□□ -0.8
LRRC28-219ENST00000560483 KCNC4Q03721 635 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 IFIT5Q13325 482 aaKnown RBP10.05□□□□□ -0.8
LRRC28-219ENST00000560483 CCDC57Q2TAC2 916 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 FAM161AQ3B820 660 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 SLC51AQ86UW1 340 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 CLUAP1Q96AJ1 413 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms