RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 ECE2O60344 883 aa18.65■□□□□ 0.58
IDH3A-219ENST00000560414 ITGBL1O95965 494 aaPredicted RBP18.65■□□□□ 0.58
IDH3A-219ENST00000560414 SPRYD3Q8NCJ5 442 aa18.65■□□□□ 0.58
IDH3A-219ENST00000560414 KLRG1Q96E93 195 aa18.65■□□□□ 0.58
IDH3A-219ENST00000560414 MINPP1Q9UNW1 487 aa18.65■□□□□ 0.58
IDH3A-219ENST00000560414 XDHP47989 1333 aa18.65■□□□□ 0.58
IDH3A-219ENST00000560414 ADAMTSL1Q8N6G6 1762 aa18.64■□□□□ 0.57
IDH3A-219ENST00000560414 SHTN1A0MZ66 631 aa18.64■□□□□ 0.57
IDH3A-219ENST00000560414 PSMD14O00487 310 aa18.64■□□□□ 0.57
IDH3A-219ENST00000560414 FOXO4P98177 505 aa18.64■□□□□ 0.57
IDH3A-219ENST00000560414 TRMT2AQ8IZ69 625 aaKnown RBP18.64■□□□□ 0.57
IDH3A-219ENST00000560414 CNTROBQ8N137 903 aa18.64■□□□□ 0.57
IDH3A-219ENST00000560414 PASKQ96RG2 1323 aa18.64■□□□□ 0.57
IDH3A-219ENST00000560414 GRM8O00222 908 aa18.63■□□□□ 0.57
IDH3A-219ENST00000560414 ATP2B4P23634 1241 aa18.63■□□□□ 0.57
IDH3A-219ENST00000560414 IGHMBP2P38935 993 aaKnown RBP18.63■□□□□ 0.57
IDH3A-219ENST00000560414 EPHA10Q5JZY3 1008 aa18.63■□□□□ 0.57
IDH3A-219ENST00000560414 USP50Q70EL3 339 aaPredicted RBP18.63■□□□□ 0.57
IDH3A-219ENST00000560414 SRCIN1Q9C0H9 1055 aa18.63■□□□□ 0.57
IDH3A-219ENST00000560414 ADARB2Q9NS39 739 aaKnown RBP18.63■□□□□ 0.57
IDH3A-219ENST00000560414 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
IDH3A-219ENST00000560414 G3V3G9 751 aa18.62■□□□□ 0.57
IDH3A-219ENST00000560414 ALDH1L1O75891 902 aa18.62■□□□□ 0.57
IDH3A-219ENST00000560414 MS4A3Q96HJ5 214 aa18.62■□□□□ 0.57
IDH3A-219ENST00000560414 CNOT7Q9UIV1 285 aaKnown RBP18.62■□□□□ 0.57
IDH3A-219ENST00000560414 CHMP3Q9Y3E7 222 aa18.62■□□□□ 0.57
IDH3A-219ENST00000560414 SPEF2Q9C093 1822 aa18.61■□□□□ 0.57
IDH3A-219ENST00000560414 LMBR1LQ6UX01 489 aa18.61■□□□□ 0.57
IDH3A-219ENST00000560414 MPHOSPH8Q99549 860 aa18.61■□□□□ 0.57
IDH3A-219ENST00000560414 ANKRD18BA2A2Z9 1011 aa18.6■□□□□ 0.57
IDH3A-219ENST00000560414 CCT4P50991 539 aaKnown RBP18.6■□□□□ 0.57
IDH3A-219ENST00000560414 FMR1Q06787 632 aaKnown RBP eCLIP18.6■□□□□ 0.57
IDH3A-219ENST00000560414 MICALL2Q8IY33 904 aa18.6■□□□□ 0.57
IDH3A-219ENST00000560414 PTPRCP08575 1304 aa18.59■□□□□ 0.57
IDH3A-219ENST00000560414 NBPF7P0C2Y1 421 aaPredicted RBP18.59■□□□□ 0.57
IDH3A-219ENST00000560414 HIRAP54198 1017 aaPredicted RBP18.59■□□□□ 0.57
IDH3A-219ENST00000560414 IFIT5Q13325 482 aaKnown RBP18.59■□□□□ 0.57
IDH3A-219ENST00000560414 ALDH1L2Q3SY69 923 aa18.59■□□□□ 0.57
IDH3A-219ENST00000560414 TRPM4Q8TD43 1214 aa18.59■□□□□ 0.57
IDH3A-219ENST00000560414 SMC4Q9NTJ3 1288 aa18.59■□□□□ 0.57
IDH3A-219ENST00000560414 H7C1D1 291 aa18.58■□□□□ 0.56
IDH3A-219ENST00000560414 DPF2Q92785 391 aa18.58■□□□□ 0.56
IDH3A-219ENST00000560414 SUCLG2Q96I99 432 aa18.58■□□□□ 0.56
IDH3A-219ENST00000560414 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
IDH3A-219ENST00000560414 SCN9AQ15858 1988 aa18.58■□□□□ 0.56
IDH3A-219ENST00000560414 TMEM88BA6NKF7 163 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 TRAF5O00463 557 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 VIL1P09327 827 aaKnown RBP18.57■□□□□ 0.56
IDH3A-219ENST00000560414 CHRNDQ07001 517 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 SAMD7Q7Z3H4 446 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 TXNRD3Q86VQ6 643 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 JMYQ8N9B5 988 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 KAZALD1Q96I82 304 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 ZNF594Q96JF6 807 aaPredicted RBP18.57■□□□□ 0.56
IDH3A-219ENST00000560414 PCNTO95613 3336 aa18.57■□□□□ 0.56
IDH3A-219ENST00000560414 SNAP23O00161 211 aa18.56■□□□□ 0.56
IDH3A-219ENST00000560414 EGFRP00533 1210 aa18.56■□□□□ 0.56
IDH3A-219ENST00000560414 KLRK1P26718 216 aa18.56■□□□□ 0.56
IDH3A-219ENST00000560414 TBC1D10BQ4KMP7 808 aaPredicted RBP18.56■□□□□ 0.56
IDH3A-219ENST00000560414 HELBQ8NG08 1087 aaPredicted RBP18.56■□□□□ 0.56
IDH3A-219ENST00000560414 ANKRD2Q9GZV1 360 aa18.56■□□□□ 0.56
IDH3A-219ENST00000560414 LEMD3Q9Y2U8 911 aa18.56■□□□□ 0.56
IDH3A-219ENST00000560414 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
IDH3A-219ENST00000560414 ZNF804BA4D1E1 1349 aa18.55■□□□□ 0.56
IDH3A-219ENST00000560414 TAF5LO75529 589 aa18.55■□□□□ 0.56
IDH3A-219ENST00000560414 RPS12P25398 132 aaKnown RBP18.55■□□□□ 0.56
IDH3A-219ENST00000560414 CLCN6P51797 869 aa18.55■□□□□ 0.56
IDH3A-219ENST00000560414 CCDC57Q2TAC2 916 aa18.55■□□□□ 0.56
IDH3A-219ENST00000560414 RBM26Q5T8P6 1007 aaKnown RBP18.55■□□□□ 0.56
IDH3A-219ENST00000560414 PODNQ7Z5L7 613 aa18.55■□□□□ 0.56
IDH3A-219ENST00000560414 UTYO14607 1347 aa18.54■□□□□ 0.56
IDH3A-219ENST00000560414 CT47B1P0C2W7 299 aaPredicted RBP18.54■□□□□ 0.56
IDH3A-219ENST00000560414 TAF7LQ5H9L4 462 aa18.54■□□□□ 0.56
IDH3A-219ENST00000560414 RSBN1LQ6PCB5 846 aaPredicted RBP18.54■□□□□ 0.56
IDH3A-219ENST00000560414 GLIS2Q9BZE0 524 aaPredicted RBP18.54■□□□□ 0.56
IDH3A-219ENST00000560414 PGAP2Q9UHJ9 254 aa18.54■□□□□ 0.56
IDH3A-219ENST00000560414 USP17L3A6NCW0 530 aa18.53■□□□□ 0.56
IDH3A-219ENST00000560414 USP17L4A6NCW7 530 aa18.53■□□□□ 0.56
IDH3A-219ENST00000560414 KCNJ4P48050 445 aa18.53■□□□□ 0.56
IDH3A-219ENST00000560414 LDHAL6AQ6ZMR3 332 aa18.53■□□□□ 0.56
IDH3A-219ENST00000560414 USP17L1Q7RTZ2 530 aa18.53■□□□□ 0.56
IDH3A-219ENST00000560414 ZC3H15Q8WU90 426 aaKnown RBP18.53■□□□□ 0.56
IDH3A-219ENST00000560414 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
IDH3A-219ENST00000560414 BICC1Q9H694 974 aaKnown RBP18.53■□□□□ 0.56
IDH3A-219ENST00000560414 NOB1Q9ULX3 412 aaKnown RBP18.53■□□□□ 0.56
IDH3A-219ENST00000560414 PLIN1O60240 522 aa18.52■□□□□ 0.56
IDH3A-219ENST00000560414 MXD3Q9BW11 206 aa18.52■□□□□ 0.56
IDH3A-219ENST00000560414 COA1Q9GZY4 146 aa18.52■□□□□ 0.56
IDH3A-219ENST00000560414 CNNM1Q9NRU3 951 aa18.52■□□□□ 0.56
IDH3A-219ENST00000560414 RARSP54136 660 aaKnown RBP18.51■□□□□ 0.55
IDH3A-219ENST00000560414 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
IDH3A-219ENST00000560414 CST9Q5W186 159 aa18.51■□□□□ 0.55
IDH3A-219ENST00000560414 ANKRD44Q8N8A2 993 aa18.51■□□□□ 0.55
IDH3A-219ENST00000560414 AGBL3Q8NEM8 1001 aa18.51■□□□□ 0.55
IDH3A-219ENST00000560414 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
IDH3A-219ENST00000560414 CNTNAP1P78357 1384 aa18.51■□□□□ 0.55
IDH3A-219ENST00000560414 KIF4BQ2VIQ3 1234 aa18.5■□□□□ 0.55
IDH3A-219ENST00000560414 DLK2Q6UY11 383 aa18.5■□□□□ 0.55
IDH3A-219ENST00000560414 GMLQ99445 158 aa18.5■□□□□ 0.55
IDH3A-219ENST00000560414 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms