RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
SMAD3-214ENST00000560402 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
SMAD3-214ENST00000560402 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
SMAD3-214ENST00000560402 G2E3Q7L622 706 aa17.3■□□□□ 0.36
SMAD3-214ENST00000560402 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
SMAD3-214ENST00000560402 MINPP1Q9UNW1 487 aa17.3■□□□□ 0.36
SMAD3-214ENST00000560402 USP17L8P0C7I0 530 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 MMP14P50281 582 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 GCKRQ14397 625 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 RGMBQ6NW40 437 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 CCDC102AQ96A19 550 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 GMLQ99445 158 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 LEMD3Q9Y2U8 911 aa17.29■□□□□ 0.36
SMAD3-214ENST00000560402 ABHD8Q96I13 439 aa17.28■□□□□ 0.36
SMAD3-214ENST00000560402 ANKRD2Q9GZV1 360 aa17.28■□□□□ 0.36
SMAD3-214ENST00000560402 COA1Q9GZY4 146 aa17.28■□□□□ 0.36
SMAD3-214ENST00000560402 MYOZ2Q9NPC6 264 aa17.28■□□□□ 0.36
SMAD3-214ENST00000560402 ITGA6P23229 1130 aa17.27■□□□□ 0.36
SMAD3-214ENST00000560402 FKBP1BP68106 108 aa17.27■□□□□ 0.36
SMAD3-214ENST00000560402 CDCA5Q96FF9 252 aa17.27■□□□□ 0.36
SMAD3-214ENST00000560402 CASP8AP2Q9UKL3 1982 aa17.27■□□□□ 0.36
SMAD3-214ENST00000560402 ECM29Q5VYK3 1845 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 FAM155AB1AL88 458 aaPredicted RBP17.26■□□□□ 0.35
SMAD3-214ENST00000560402 CSF1RP07333 972 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 CASP7P55210 303 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 SCARF1Q14162 830 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 FAM161AQ3B820 660 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 STRIP1Q5VSL9 837 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 ANGEL2Q5VTE6 544 aaKnown RBP17.26■□□□□ 0.35
SMAD3-214ENST00000560402 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 SAGE1Q9NXZ1 904 aa17.26■□□□□ 0.35
SMAD3-214ENST00000560402 VAMP4O75379 141 aa17.25■□□□□ 0.35
SMAD3-214ENST00000560402 SLC10A3P09131 477 aa17.25■□□□□ 0.35
SMAD3-214ENST00000560402 DACT2Q5SW24 774 aa17.25■□□□□ 0.35
SMAD3-214ENST00000560402 OGFOD1Q8N543 542 aa17.25■□□□□ 0.35
SMAD3-214ENST00000560402 TSKSQ9UJT2 592 aa17.25■□□□□ 0.35
SMAD3-214ENST00000560402 ZNF804BA4D1E1 1349 aa17.24■□□□□ 0.35
SMAD3-214ENST00000560402 ASTN2O75129 1339 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-214ENST00000560402 ZNF157P51786 506 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-214ENST00000560402 DLK2Q6UY11 383 aa17.24■□□□□ 0.35
SMAD3-214ENST00000560402 REM2Q8IYK8 340 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-214ENST00000560402 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-214ENST00000560402 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
SMAD3-214ENST00000560402 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
SMAD3-214ENST00000560402 KCNJ4P48050 445 aa17.22■□□□□ 0.35
SMAD3-214ENST00000560402 CHRNDQ07001 517 aa17.21■□□□□ 0.35
SMAD3-214ENST00000560402 FBXW7Q969H0 707 aa17.21■□□□□ 0.35
SMAD3-214ENST00000560402 ZIC5Q96T25 663 aa17.21■□□□□ 0.35
SMAD3-214ENST00000560402 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
SMAD3-214ENST00000560402 ARAP2Q8WZ64 1704 aa17.21■□□□□ 0.35
SMAD3-214ENST00000560402 WNT10BO00744 389 aa17.2■□□□□ 0.34
SMAD3-214ENST00000560402 NF2P35240 595 aa17.2■□□□□ 0.34
SMAD3-214ENST00000560402 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■□□□ 11.4
SMAD3-214ENST00000560402 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
SMAD3-214ENST00000560402 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
SMAD3-214ENST00000560402 BEND3Q5T5X7 828 aa17.2■□□□□ 0.34
SMAD3-214ENST00000560402 C15orf52Q6ZUT6 534 aaKnown RBP17.2■□□□□ 0.34
SMAD3-214ENST00000560402 TXNRD3Q86VQ6 643 aa17.2■□□□□ 0.34
SMAD3-214ENST00000560402 RASAL3Q86YV0 1011 aa17.2■□□□□ 0.34
SMAD3-214ENST00000560402 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-214ENST00000560402 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
SMAD3-214ENST00000560402 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
SMAD3-214ENST00000560402 MCOLN1Q9GZU1 580 aa17.19■□□□□ 0.34
SMAD3-214ENST00000560402 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
SMAD3-214ENST00000560402 GTF3C3Q9Y5Q9 886 aa17.19■□□□□ 0.34
SMAD3-214ENST00000560402 GRM8O00222 908 aa17.18■□□□□ 0.34
SMAD3-214ENST00000560402 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
SMAD3-214ENST00000560402 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
SMAD3-214ENST00000560402 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
SMAD3-214ENST00000560402 LAMB1P07942 1786 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 F6X3S4 739 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 ALDH1L1O75891 902 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 KLRK1P26718 216 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 FOXO4P98177 505 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 ZNF804AQ7Z570 1209 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 MXD3Q9BW11 206 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 CD209Q9NNX6 404 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 CHMP3Q9Y3E7 222 aa17.17■□□□□ 0.34
SMAD3-214ENST00000560402 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
SMAD3-214ENST00000560402 GTF2IP78347 998 aa17.16■□□□□ 0.34
SMAD3-214ENST00000560402 DGKZQ13574 1117 aa17.16■□□□□ 0.34
SMAD3-214ENST00000560402 CCDC57Q2TAC2 916 aa17.16■□□□□ 0.34
SMAD3-214ENST00000560402 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
SMAD3-214ENST00000560402 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
SMAD3-214ENST00000560402 SASH1O94885 1247 aa17.15■□□□□ 0.34
SMAD3-214ENST00000560402 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
SMAD3-214ENST00000560402 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
SMAD3-214ENST00000560402 KIAA0825Q8IV33 1275 aa17.15■□□□□ 0.34
SMAD3-214ENST00000560402 ZBED3Q96IU2 234 aaPredicted RBP17.15■□□□□ 0.34
SMAD3-214ENST00000560402 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
SMAD3-214ENST00000560402 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
SMAD3-214ENST00000560402 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
SMAD3-214ENST00000560402 IL1R1P14778 569 aa17.14■□□□□ 0.33
SMAD3-214ENST00000560402 TTLL12Q14166 644 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-214ENST00000560402 MTMR14Q8NCE2 650 aa17.14■□□□□ 0.33
SMAD3-214ENST00000560402 SRCIN1Q9C0H9 1055 aa17.14■□□□□ 0.33
SMAD3-214ENST00000560402 PPP2R3BQ9Y5P8 575 aa17.14■□□□□ 0.33
SMAD3-214ENST00000560402 TRPA1O75762 1119 aa17.13■□□□□ 0.33
SMAD3-214ENST00000560402 RGS19P49795 217 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms