RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 DACT2Q5SW24 774 aa21.54■■□□□ 1.04
HERC1-207ENST00000560316 GCC1Q96CN9 775 aa21.54■■□□□ 1.04
HERC1-207ENST00000560316 OGFOD1Q8N543 542 aa21.53■■□□□ 1.04
HERC1-207ENST00000560316 CCDC191Q8NCU4 936 aa21.53■■□□□ 1.04
HERC1-207ENST00000560316 CFHR5Q9BXR6 569 aa21.53■■□□□ 1.04
HERC1-207ENST00000560316 ARMC9Q7Z3E5 817 aa21.52■■□□□ 1.04
HERC1-207ENST00000560316 MBIPQ9NS73 344 aa21.52■■□□□ 1.04
HERC1-207ENST00000560316 CWC25Q9NXE8 425 aaPredicted RBP21.52■■□□□ 1.04
HERC1-207ENST00000560316 FZD1Q9UP38 647 aa21.52■■□□□ 1.04
HERC1-207ENST00000560316 MED23Q9ULK4 1368 aa21.51■■□□□ 1.03
HERC1-207ENST00000560316 HABP4Q5JVS0 413 aaKnown RBP21.51■■□□□ 1.03
HERC1-207ENST00000560316 SPRYD7Q5W111 196 aa21.51■■□□□ 1.03
HERC1-207ENST00000560316 RUNDC1Q96C34 613 aa21.51■■□□□ 1.03
HERC1-207ENST00000560316 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
HERC1-207ENST00000560316 MKI67P46013 3256 aaKnown RBP21.51■■□□□ 1.03
HERC1-207ENST00000560316 POTEFA5A3E0 1075 aa21.5■■□□□ 1.03
HERC1-207ENST00000560316 ANGEL1Q9UNK9 670 aaKnown RBP21.5■■□□□ 1.03
HERC1-207ENST00000560316 MINPP1Q9UNW1 487 aa21.5■■□□□ 1.03
HERC1-207ENST00000560316 TRIM17Q9Y577 477 aa21.5■■□□□ 1.03
HERC1-207ENST00000560316 HTTP42858 3142 aa21.5■■□□□ 1.03
HERC1-207ENST00000560316 ELL2O00472 640 aaPredicted RBP21.49■■□□□ 1.03
HERC1-207ENST00000560316 LDLRAD1Q5T700 205 aa21.49■■□□□ 1.03
HERC1-207ENST00000560316 STRIP1Q5VSL9 837 aa21.49■■□□□ 1.03
HERC1-207ENST00000560316 CDC5LQ99459 802 aaKnown RBP21.49■■□□□ 1.03
HERC1-207ENST00000560316 ZNF646O15015 1829 aaPredicted RBP21.49■■□□□ 1.03
HERC1-207ENST00000560316 CCT4P50991 539 aaKnown RBP21.48■■□□□ 1.03
HERC1-207ENST00000560316 CTSWP56202 376 aa21.48■■□□□ 1.03
HERC1-207ENST00000560316 RALBP1Q15311 655 aa21.48■■□□□ 1.03
HERC1-207ENST00000560316 OTOP1Q7RTM1 612 aa21.48■■□□□ 1.03
HERC1-207ENST00000560316 TXNRD3Q86VQ6 643 aa21.48■■□□□ 1.03
HERC1-207ENST00000560316 METTL22Q9BUU2 404 aaPredicted RBP21.48■■□□□ 1.03
HERC1-207ENST00000560316 MYO3BQ8WXR4 1341 aa21.48■■□□□ 1.03
HERC1-207ENST00000560316 ALDH1A1P00352 501 aa21.47■■□□□ 1.03
HERC1-207ENST00000560316 IFNL1Q8IU54 200 aa21.47■■□□□ 1.03
HERC1-207ENST00000560316 APOBEC3FQ8IUX4 373 aaKnown RBP21.47■■□□□ 1.03
HERC1-207ENST00000560316 KIAA0825Q8IV33 1275 aa21.47■■□□□ 1.03
HERC1-207ENST00000560316 COA1Q9GZY4 146 aa21.47■■□□□ 1.03
HERC1-207ENST00000560316 GREM2Q9H772 168 aa21.47■■□□□ 1.03
HERC1-207ENST00000560316 BSDC1Q9NW68 430 aaPredicted RBP21.47■■□□□ 1.03
HERC1-207ENST00000560316 TTLL11Q8NHH1 800 aa21.46■■□□□ 1.03
HERC1-207ENST00000560316 SPEF2Q9C093 1822 aa21.45■■□□□ 1.03
HERC1-207ENST00000560316 MANSC4A6NHS7 340 aaPredicted RBP21.45■■□□□ 1.02
HERC1-207ENST00000560316 TTLL5Q6EMB2 1281 aa21.45■■□□□ 1.02
HERC1-207ENST00000560316 SLC10A4Q96EP9 437 aa21.45■■□□□ 1.02
HERC1-207ENST00000560316 KLRK1P26718 216 aa21.44■■□□□ 1.02
HERC1-207ENST00000560316 INTS3Q68E01 1043 aaKnown RBP21.44■■□□□ 1.02
HERC1-207ENST00000560316 ZBED3Q96IU2 234 aaPredicted RBP21.44■■□□□ 1.02
HERC1-207ENST00000560316 CLMNQ96JQ2 1002 aa21.44■■□□□ 1.02
HERC1-207ENST00000560316 CENPFP49454 3210 aa21.43■■□□□ 1.02
HERC1-207ENST00000560316 IGF2BP3O00425 579 aaKnown RBP eCLIP21.43■■□□□ 1.02
HERC1-207ENST00000560316 ZNF853P0CG23 659 aa21.43■■□□□ 1.02
HERC1-207ENST00000560316 WDR43Q15061 677 aaKnown RBP eCLIP21.43■■□□□ 1.02
HERC1-207ENST00000560316 DEFB129Q9H1M3 183 aa21.43■■□□□ 1.02
HERC1-207ENST00000560316 ADAMTS8Q9UP79 889 aa21.43■■□□□ 1.02
HERC1-207ENST00000560316 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
HERC1-207ENST00000560316 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
HERC1-207ENST00000560316 MMP14P50281 582 aa21.42■■□□□ 1.02
HERC1-207ENST00000560316 INHBEP58166 350 aa21.42■■□□□ 1.02
HERC1-207ENST00000560316 GTF2IP78347 998 aa21.42■■□□□ 1.02
HERC1-207ENST00000560316 WNK4Q96J92 1243 aa21.42■■□□□ 1.02
HERC1-207ENST00000560316 LEMD3Q9Y2U8 911 aa21.42■■□□□ 1.02
HERC1-207ENST00000560316 IGKV5-2P06315 115 aa21.41■■□□□ 1.02
HERC1-207ENST00000560316 C8orf58Q8NAV2 365 aa21.41■■□□□ 1.02
HERC1-207ENST00000560316 CD99L2Q8TCZ2 262 aa21.41■■□□□ 1.02
HERC1-207ENST00000560316 PTPN22Q9Y2R2 807 aa21.41■■□□□ 1.02
HERC1-207ENST00000560316 SSC5DA1L4H1 1573 aa21.4■■□□□ 1.02
HERC1-207ENST00000560316 ZNF804BA4D1E1 1349 aa21.4■■□□□ 1.02
HERC1-207ENST00000560316 ZBTB48P10074 688 aaPredicted RBP21.4■■□□□ 1.02
HERC1-207ENST00000560316 EN2P19622 333 aaPredicted RBP21.4■■□□□ 1.02
HERC1-207ENST00000560316 MAP3K11Q16584 847 aa21.4■■□□□ 1.02
HERC1-207ENST00000560316 PCDHAC2Q9Y5I4 1007 aa21.4■■□□□ 1.02
HERC1-207ENST00000560316 KIAA0100Q14667 2235 aaKnown RBP21.4■■□□□ 1.02
HERC1-207ENST00000560316 MYBBP1AQ9BQG0 1328 aaKnown RBP21.39■■□□□ 1.01
HERC1-207ENST00000560316 IGHMBP2P38935 993 aaKnown RBP21.39■■□□□ 1.01
HERC1-207ENST00000560316 DLGAP5Q15398 846 aa21.39■■□□□ 1.01
HERC1-207ENST00000560316 ERO1AQ96HE7 468 aa21.39■■□□□ 1.01
HERC1-207ENST00000560316 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
HERC1-207ENST00000560316 COL1A1P02452 1464 aaPredicted RBP21.39■■□□□ 1.01
HERC1-207ENST00000560316 MYH3P11055 1940 aa21.38■■□□□ 1.01
HERC1-207ENST00000560316 PI4KAP2A4QPH2 592 aa21.38■■□□□ 1.01
HERC1-207ENST00000560316 FXR1P51114 621 aaKnown RBP eCLIP21.38■■□□□ 1.01
HERC1-207ENST00000560316 CRHR2Q13324 411 aa21.38■■□□□ 1.01
HERC1-207ENST00000560316 CWF19L2Q2TBE0 894 aaKnown RBP21.38■■□□□ 1.01
HERC1-207ENST00000560316 PI4KAP1Q8N8J0 262 aa21.38■■□□□ 1.01
HERC1-207ENST00000560316 BRCA2P51587 3418 aa21.38■■□□□ 1.01
HERC1-207ENST00000560316 PPP1R12BO60237 982 aaPredicted RBP21.37■■□□□ 1.01
HERC1-207ENST00000560316 GJA5P36382 358 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 GNAI1P63096 354 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 CAP1Q01518 475 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 CCDC30Q5VVM6 783 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 KSR2Q6VAB6 950 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 CERS5Q8N5B7 392 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 ARMC5Q96C12 935 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 EFCC1Q9HA90 598 aa21.37■■□□□ 1.01
HERC1-207ENST00000560316 CLRN2A0PK11 232 aa21.36■■□□□ 1.01
HERC1-207ENST00000560316 UBE3BQ7Z3V4 1068 aa21.36■■□□□ 1.01
HERC1-207ENST00000560316 CD209Q9NNX6 404 aa21.36■■□□□ 1.01
HERC1-207ENST00000560316 RBBP6Q7Z6E9 1792 aaKnown RBP21.36■■□□□ 1.01
HERC1-207ENST00000560316 F8W031 263 aaPredicted RBP21.35■■□□□ 1.01
HERC1-207ENST00000560316 ITGA6P23229 1130 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms