RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 TAF5LO75529 589 aa14.88□□□□□ -0.03
RABGGTA-215ENST00000560207 GPC2Q8N158 579 aa14.88□□□□□ -0.03
RABGGTA-215ENST00000560207 KLHDC4Q8TBB5 520 aa14.88□□□□□ -0.03
RABGGTA-215ENST00000560207 GNL3LQ9NVN8 582 aaKnown RBP14.88□□□□□ -0.03
RABGGTA-215ENST00000560207 GLTPD2A6NH11 291 aa14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 RIMBP2O15034 1052 aa14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 YY1P25490 414 aa14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 ATP2B3Q16720 1220 aa14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 VPS37DQ86XT2 251 aa14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 PA2G4Q9UQ80 394 aaKnown RBP14.87□□□□□ -0.03
RABGGTA-215ENST00000560207 SEMA3EO15041 775 aa14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 ECE2O60344 883 aa14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 NEFLP07196 543 aa14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 FGFR2P21802 821 aa14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 HIBADHP31937 336 aaKnown RBP14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 HDAC1Q13547 482 aaPredicted RBP14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 CIAPIN1Q6FI81 312 aa14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 RWDD1Q9H446 243 aaPredicted RBP14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 MYO3BQ8WXR4 1341 aa14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
RABGGTA-215ENST00000560207 ZNF609O15014 1411 aa14.85□□□□□ -0.03
RABGGTA-215ENST00000560207 IQCA1LA6NCM1 817 aa14.85□□□□□ -0.03
RABGGTA-215ENST00000560207 IL1R1P14778 569 aa14.85□□□□□ -0.03
RABGGTA-215ENST00000560207 RPS12P25398 132 aaKnown RBP14.85□□□□□ -0.03
RABGGTA-215ENST00000560207 PRELPP51888 382 aa14.85□□□□□ -0.03
RABGGTA-215ENST00000560207 GCC1Q96CN9 775 aa14.85□□□□□ -0.03
RABGGTA-215ENST00000560207 DCTPP1Q9H773 170 aa14.85□□□□□ -0.03
RABGGTA-215ENST00000560207 IGSF3O75054 1194 aa14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 SASH1O94885 1247 aa14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 FKBP1AP62942 108 aaKnown RBP14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 TFCP2Q12800 502 aa14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 STRIP1Q5VSL9 837 aa14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 SIRT2Q8IXJ6 389 aa14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 L3MBTL3Q96JM7 780 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 CD209Q9NNX6 404 aa14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 IRS2Q9Y4H2 1338 aa14.84□□□□□ -0.03
RABGGTA-215ENST00000560207 A0A1B0GUL7 405 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 USP17L3A6NCW0 530 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 USP17L4A6NCW7 530 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 GORABQ5T7V8 394 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 ERICH6BQ5W0A0 696 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 USP17L1Q7RTZ2 530 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 FBXO33Q7Z6M2 555 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 AGBL3Q8NEM8 1001 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 TBC1D22AQ8WUA7 517 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 DPF2Q92785 391 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 FAM84BQ96KN1 310 aaPredicted RBP14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 DBNDD1Q9H9R9 158 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 SCN9AQ15858 1988 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 UTRNP46939 3433 aa14.83□□□□□ -0.04
RABGGTA-215ENST00000560207 UQCRFS1P1P0C7P4 283 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 LMOD1P29536 600 aaPredicted RBP14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 CXCL9Q07325 125 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 DOK7Q18PE1 504 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 TDRD7Q8NHU6 1098 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 EXOC6Q8TAG9 804 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 RHPN1Q8TCX5 695 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 LRRCC1Q9C099 1032 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 EXOC6BQ9Y2D4 811 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 PCDHB15Q9Y5E8 787 aa14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 PDS5AQ29RF7 1337 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-215ENST00000560207 FRAT2O75474 233 aaPredicted RBP14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 VIL1P09327 827 aaKnown RBP14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 VEGFAP15692 232 aaPredicted RBP14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 TNNI3KQ59H18 835 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 CCDC158Q5M9N0 1113 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 TTLL5Q6EMB2 1281 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 TXNRD3Q86VQ6 643 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 ZGPATQ8N5A5 531 aaKnown RBP14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 NEUROD6Q96NK8 337 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 GPBP1L1Q9HC44 474 aaPredicted RBP14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 DENND2AQ9ULE3 1009 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 SUGT1Q9Y2Z0 365 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 FPGT-TNNI3KV9GXZ4 949 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 FAM205AQ6ZU69 1335 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 COL4A5P29400 1685 aa14.81□□□□□ -0.04
RABGGTA-215ENST00000560207 WDR66Q8TBY9 1149 aa14.8□□□□□ -0.04
RABGGTA-215ENST00000560207 XAGE2Q96GT9 111 aa14.8□□□□□ -0.04
RABGGTA-215ENST00000560207 ZNF512BQ96KM6 892 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-215ENST00000560207 YDJCA8MPS7 323 aa14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 ZNF646O15015 1829 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 GYG1P46976 350 aa14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 TIMM10P62072 90 aa14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 RSBN1LQ6PCB5 846 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 SLC51AQ86UW1 340 aa14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 PNMA8AQ86V59 439 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 GPR101Q96P66 508 aaPredicted RBP14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 GJA3Q9Y6H8 435 aa14.79□□□□□ -0.04
RABGGTA-215ENST00000560207 ZNF541Q9H0D2 1346 aa14.78□□□□□ -0.04
RABGGTA-215ENST00000560207 H7C1D1 291 aa14.78□□□□□ -0.04
RABGGTA-215ENST00000560207 PSMD14O00487 310 aa14.78□□□□□ -0.04
RABGGTA-215ENST00000560207 RAD17O75943 681 aa14.78□□□□□ -0.04
RABGGTA-215ENST00000560207 DDNO94850 711 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-215ENST00000560207 IFIT2P09913 472 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-215ENST00000560207 CCDC102BQ68D86 513 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms