RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 G3V3G9 751 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 SNAP23O00161 211 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 KLRK1P26718 216 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 ZNF280AP59817 542 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-213ENST00000560175 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 STRIP1Q5VSL9 837 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 MAP1SQ66K74 1059 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-213ENST00000560175 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 MICALL2Q8IY33 904 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 HELBQ8NG08 1087 aaPredicted RBP16.6■□□□□ 0.25
SMAD3-213ENST00000560175 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
SMAD3-213ENST00000560175 CNNM1Q9NRU3 951 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 CREBZFQ9NS37 354 aa16.6■□□□□ 0.25
SMAD3-213ENST00000560175 HTRA3P83110 453 aa16.59■□□□□ 0.25
SMAD3-213ENST00000560175 UBE4AQ14139 1066 aa16.59■□□□□ 0.25
SMAD3-213ENST00000560175 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
SMAD3-213ENST00000560175 TRPM4Q8TD43 1214 aa16.59■□□□□ 0.25
SMAD3-213ENST00000560175 CD209Q9NNX6 404 aa16.59■□□□□ 0.25
SMAD3-213ENST00000560175 HDAC5Q9UQL6 1122 aa16.59■□□□□ 0.25
SMAD3-213ENST00000560175 TRPM7Q96QT4 1865 aa16.59■□□□□ 0.25
SMAD3-213ENST00000560175 UBTFL1P0CB47 393 aaPredicted RBP16.58■□□□□ 0.24
SMAD3-213ENST00000560175 IL1R1P14778 569 aa16.58■□□□□ 0.24
SMAD3-213ENST00000560175 MMP14P50281 582 aa16.58■□□□□ 0.24
SMAD3-213ENST00000560175 PTPN12Q05209 780 aaKnown RBP16.58■□□□□ 0.24
SMAD3-213ENST00000560175 TAF7LQ5H9L4 462 aa16.58■□□□□ 0.24
SMAD3-213ENST00000560175 VGLL2Q8N8G2 317 aa16.58■□□□□ 0.24
SMAD3-213ENST00000560175 KLRG1Q96E93 195 aa16.58■□□□□ 0.24
SMAD3-213ENST00000560175 MROH5Q6ZUA9 1318 aa16.58■□□□□ 0.24
SMAD3-213ENST00000560175 PCNTO95613 3336 aa16.58■□□□□ 0.24
SMAD3-213ENST00000560175 EGFRP00533 1210 aa16.57■□□□□ 0.24
SMAD3-213ENST00000560175 LRRC24Q50LG9 513 aa16.57■□□□□ 0.24
SMAD3-213ENST00000560175 SAMD7Q7Z3H4 446 aa16.57■□□□□ 0.24
SMAD3-213ENST00000560175 JMYQ8N9B5 988 aa16.57■□□□□ 0.24
SMAD3-213ENST00000560175 MEIS3Q99687 375 aa16.57■□□□□ 0.24
SMAD3-213ENST00000560175 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
SMAD3-213ENST00000560175 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
SMAD3-213ENST00000560175 KCNJ4P48050 445 aa16.56■□□□□ 0.24
SMAD3-213ENST00000560175 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
SMAD3-213ENST00000560175 MYO3BQ8WXR4 1341 aa16.55■□□□□ 0.24
SMAD3-213ENST00000560175 TMEM88BA6NKF7 163 aa16.55■□□□□ 0.24
SMAD3-213ENST00000560175 PDE8BO95263 885 aa16.55■□□□□ 0.24
SMAD3-213ENST00000560175 GNAI3P08754 354 aa16.55■□□□□ 0.24
SMAD3-213ENST00000560175 MTX1Q13505 466 aa16.55■□□□□ 0.24
SMAD3-213ENST00000560175 TTLL5Q6EMB2 1281 aa16.55■□□□□ 0.24
SMAD3-213ENST00000560175 FAM84BQ96KN1 310 aaPredicted RBP16.55■□□□□ 0.24
SMAD3-213ENST00000560175 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
SMAD3-213ENST00000560175 EYA2O00167 538 aa16.54■□□□□ 0.24
SMAD3-213ENST00000560175 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
SMAD3-213ENST00000560175 FGFR2P21802 821 aa16.54■□□□□ 0.24
SMAD3-213ENST00000560175 FKBP1AP62942 108 aaKnown RBP16.54■□□□□ 0.24
SMAD3-213ENST00000560175 CST9Q5W186 159 aa16.54■□□□□ 0.24
SMAD3-213ENST00000560175 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
SMAD3-213ENST00000560175 TDRD7Q8NHU6 1098 aaKnown RBP16.54■□□□□ 0.24
SMAD3-213ENST00000560175 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
SMAD3-213ENST00000560175 FRAT1Q92837 279 aaPredicted RBP16.54■□□□□ 0.24
SMAD3-213ENST00000560175 PLIN1O60240 522 aa16.53■□□□□ 0.24
SMAD3-213ENST00000560175 CIAO1O76071 339 aa16.53■□□□□ 0.24
SMAD3-213ENST00000560175 SASH1O94885 1247 aa16.53■□□□□ 0.24
SMAD3-213ENST00000560175 TBC1D10BQ4KMP7 808 aaPredicted RBP16.53■□□□□ 0.24
SMAD3-213ENST00000560175 CDC37L1Q7L3B6 337 aa16.53■□□□□ 0.24
SMAD3-213ENST00000560175 ZNF804AQ7Z570 1209 aa16.53■□□□□ 0.24
SMAD3-213ENST00000560175 FBXO33Q7Z6M2 555 aa16.53■□□□□ 0.24
SMAD3-213ENST00000560175 COPRSQ9NQ92 184 aa16.53■□□□□ 0.24
SMAD3-213ENST00000560175 FAM205AQ6ZU69 1335 aa16.52■□□□□ 0.24
SMAD3-213ENST00000560175 GTF2IP78347 998 aa16.52■□□□□ 0.24
SMAD3-213ENST00000560175 FMR1Q06787 632 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMAD3-213ENST00000560175 KIF4BQ2VIQ3 1234 aa16.52■□□□□ 0.24
SMAD3-213ENST00000560175 TMEM57Q8N5G2 664 aa16.52■□□□□ 0.24
SMAD3-213ENST00000560175 MXD3Q9BW11 206 aa16.52■□□□□ 0.24
SMAD3-213ENST00000560175 MYOZ2Q9NPC6 264 aa16.52■□□□□ 0.24
SMAD3-213ENST00000560175 TRAF5O00463 557 aa16.51■□□□□ 0.23
SMAD3-213ENST00000560175 ZBTB22O15209 634 aa16.51■□□□□ 0.23
SMAD3-213ENST00000560175 HIBADHP31937 336 aaKnown RBP16.51■□□□□ 0.23
SMAD3-213ENST00000560175 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
SMAD3-213ENST00000560175 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
SMAD3-213ENST00000560175 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
SMAD3-213ENST00000560175 ZBED3Q96IU2 234 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-213ENST00000560175 GLIS2Q9BZE0 524 aaPredicted RBP16.51■□□□□ 0.23
SMAD3-213ENST00000560175 CNTNAP1P78357 1384 aa16.51■□□□□ 0.23
SMAD3-213ENST00000560175 RASSF10A6NK89 507 aa16.5■□□□□ 0.23
SMAD3-213ENST00000560175 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
SMAD3-213ENST00000560175 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
SMAD3-213ENST00000560175 GNAI2P04899 355 aa16.49■□□□□ 0.23
SMAD3-213ENST00000560175 RLBP1P12271 317 aa16.49■□□□□ 0.23
SMAD3-213ENST00000560175 GYG1P46976 350 aa16.49■□□□□ 0.23
SMAD3-213ENST00000560175 SCARF1Q14162 830 aa16.49■□□□□ 0.23
SMAD3-213ENST00000560175 RBM26Q5T8P6 1007 aaKnown RBP16.49■□□□□ 0.23
SMAD3-213ENST00000560175 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
SMAD3-213ENST00000560175 OGFOD1Q8N543 542 aa16.49■□□□□ 0.23
SMAD3-213ENST00000560175 MTMR14Q8NCE2 650 aa16.49■□□□□ 0.23
SMAD3-213ENST00000560175 WNT10BO00744 389 aa16.48■□□□□ 0.23
SMAD3-213ENST00000560175 IL15P40933 162 aaPredicted RBP16.48■□□□□ 0.23
SMAD3-213ENST00000560175 PUM3Q15397 648 aaKnown RBP16.48■□□□□ 0.23
SMAD3-213ENST00000560175 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
SMAD3-213ENST00000560175 LPIN2Q92539 896 aa16.48■□□□□ 0.23
SMAD3-213ENST00000560175 ASTN2O75129 1339 aaPredicted RBP16.47■□□□□ 0.23
SMAD3-213ENST00000560175 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
SMAD3-213ENST00000560175 DCPSQ96C86 337 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 243.9 ms