RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 KCNJ4P48050 445 aa20.95■□□□□ 0.94
RPL28-209ENST00000560055 UBE4AQ14139 1066 aa20.95■□□□□ 0.94
RPL28-209ENST00000560055 CEP85Q6P2H3 762 aa20.95■□□□□ 0.94
RPL28-209ENST00000560055 RBM46Q8TBY0 533 aaKnown RBP20.95■□□□□ 0.94
RPL28-209ENST00000560055 SIL1Q9H173 461 aa20.95■□□□□ 0.94
RPL28-209ENST00000560055 CHMP4BQ9H444 224 aaKnown RBP20.95■□□□□ 0.94
RPL28-209ENST00000560055 IL15P40933 162 aaPredicted RBP20.94■□□□□ 0.94
RPL28-209ENST00000560055 SCN9AQ15858 1988 aa20.94■□□□□ 0.94
RPL28-209ENST00000560055 CIAPIN1Q6FI81 312 aa20.93■□□□□ 0.94
RPL28-209ENST00000560055 PODNQ7Z5L7 613 aa20.93■□□□□ 0.94
RPL28-209ENST00000560055 COA1Q9GZY4 146 aa20.93■□□□□ 0.94
RPL28-209ENST00000560055 RAD17O75943 681 aa20.92■□□□□ 0.94
RPL28-209ENST00000560055 FGFR2P21802 821 aa20.92■□□□□ 0.94
RPL28-209ENST00000560055 KCNQ5Q9NR82 932 aa20.92■□□□□ 0.94
RPL28-209ENST00000560055 TNIP1Q15025 636 aa20.91■□□□□ 0.94
RPL28-209ENST00000560055 PUM3Q15397 648 aaKnown RBP20.91■□□□□ 0.94
RPL28-209ENST00000560055 PSMD14O00487 310 aa20.9■□□□□ 0.94
RPL28-209ENST00000560055 VEGFAP15692 232 aaPredicted RBP20.9■□□□□ 0.94
RPL28-209ENST00000560055 SCNN1DP51172 638 aa20.9■□□□□ 0.94
RPL28-209ENST00000560055 APLP1P51693 650 aa20.9■□□□□ 0.94
RPL28-209ENST00000560055 HTRA3P83110 453 aa20.9■□□□□ 0.94
RPL28-209ENST00000560055 GJA3Q9Y6H8 435 aa20.9■□□□□ 0.94
RPL28-209ENST00000560055 G3V3G9 751 aa20.89■□□□□ 0.93
RPL28-209ENST00000560055 DCAF8Q5TAQ9 597 aa20.89■□□□□ 0.93
RPL28-209ENST00000560055 SIRT2Q8IXJ6 389 aa20.89■□□□□ 0.93
RPL28-209ENST00000560055 RPAP2Q8IXW5 612 aaPredicted RBP20.89■□□□□ 0.93
RPL28-209ENST00000560055 CD209Q9NNX6 404 aa20.89■□□□□ 0.93
RPL28-209ENST00000560055 CEP126Q9P2H0 1117 aa20.89■□□□□ 0.93
RPL28-209ENST00000560055 NOP58Q9Y2X3 529 aaKnown RBP20.89■□□□□ 0.93
RPL28-209ENST00000560055 ZNF609O15014 1411 aa20.88■□□□□ 0.93
RPL28-209ENST00000560055 PSME4Q14997 1843 aa20.88■□□□□ 0.93
RPL28-209ENST00000560055 VIL1P09327 827 aaKnown RBP20.88■□□□□ 0.93
RPL28-209ENST00000560055 FAM84BQ96KN1 310 aaPredicted RBP20.88■□□□□ 0.93
RPL28-209ENST00000560055 SCN4AP35499 1836 aa20.88■□□□□ 0.93
RPL28-209ENST00000560055 IQCA1LA6NCM1 817 aa20.87■□□□□ 0.93
RPL28-209ENST00000560055 IL1R1P14778 569 aa20.87■□□□□ 0.93
RPL28-209ENST00000560055 GMPSP49915 693 aaPredicted RBP20.87■□□□□ 0.93
RPL28-209ENST00000560055 FSTL1Q12841 308 aa20.87■□□□□ 0.93
RPL28-209ENST00000560055 ZNF804AQ7Z570 1209 aa20.87■□□□□ 0.93
RPL28-209ENST00000560055 FBXO33Q7Z6M2 555 aa20.87■□□□□ 0.93
RPL28-209ENST00000560055 LPIN2Q92539 896 aa20.87■□□□□ 0.93
RPL28-209ENST00000560055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.87■□□□□ 0.93
RPL28-209ENST00000560055 ZNF646O15015 1829 aaPredicted RBP20.86■□□□□ 0.93
RPL28-209ENST00000560055 USP17L3A6NCW0 530 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 USP17L4A6NCW7 530 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 SASH1O94885 1247 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 GYG1P46976 350 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 G3BP1Q13283 466 aaKnown RBP eCLIP20.86■□□□□ 0.93
RPL28-209ENST00000560055 USP17L1Q7RTZ2 530 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 DNAJC5GQ8N7S2 189 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 GPRC5DQ9NZD1 345 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 HACL1Q9UJ83 578 aa20.86■□□□□ 0.93
RPL28-209ENST00000560055 IFIT1P09914 478 aaKnown RBP20.85■□□□□ 0.93
RPL28-209ENST00000560055 SLC5A1P13866 664 aa20.85■□□□□ 0.93
RPL28-209ENST00000560055 HIBADHP31937 336 aaKnown RBP20.85■□□□□ 0.93
RPL28-209ENST00000560055 TFCP2Q12800 502 aa20.85■□□□□ 0.93
RPL28-209ENST00000560055 ATP2B3Q16720 1220 aa20.85■□□□□ 0.93
RPL28-209ENST00000560055 DACT2Q5SW24 774 aa20.85■□□□□ 0.93
RPL28-209ENST00000560055 STRIP1Q5VSL9 837 aa20.85■□□□□ 0.93
RPL28-209ENST00000560055 DPF2Q92785 391 aa20.85■□□□□ 0.93
RPL28-209ENST00000560055 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
RPL28-209ENST00000560055 TAF1DQ9H5J8 278 aaPredicted RBP20.85■□□□□ 0.93
RPL28-209ENST00000560055 ZBTB12Q9Y330 459 aaPredicted RBP20.85■□□□□ 0.93
RPL28-209ENST00000560055 SUPT16HQ9Y5B9 1047 aaKnown RBP20.85■□□□□ 0.93
RPL28-209ENST00000560055 SURF6O75683 361 aaKnown RBP20.84■□□□□ 0.93
RPL28-209ENST00000560055 RPS12P25398 132 aaKnown RBP20.84■□□□□ 0.93
RPL28-209ENST00000560055 RSBN1LQ6PCB5 846 aaPredicted RBP20.84■□□□□ 0.93
RPL28-209ENST00000560055 SMC1BQ8NDV3 1235 aa20.84■□□□□ 0.93
RPL28-209ENST00000560055 TDRD7Q8NHU6 1098 aaKnown RBP20.84■□□□□ 0.93
RPL28-209ENST00000560055 GMLQ99445 158 aa20.84■□□□□ 0.93
RPL28-209ENST00000560055 HMMRO75330 724 aa20.83■□□□□ 0.93
RPL28-209ENST00000560055 EPHX2P34913 555 aa20.83■□□□□ 0.93
RPL28-209ENST00000560055 EPS15P42566 896 aa20.83■□□□□ 0.93
RPL28-209ENST00000560055 LMOD1P29536 600 aaPredicted RBP20.82■□□□□ 0.92
RPL28-209ENST00000560055 BCAMP50895 628 aa20.82■□□□□ 0.92
RPL28-209ENST00000560055 CAVIN4Q5BKX8 364 aa20.82■□□□□ 0.92
RPL28-209ENST00000560055 TTLL5Q6EMB2 1281 aa20.82■□□□□ 0.92
RPL28-209ENST00000560055 AGBL3Q8NEM8 1001 aa20.82■□□□□ 0.92
RPL28-209ENST00000560055 AKAP2Q9Y2D5 859 aa20.82■□□□□ 0.92
RPL28-209ENST00000560055 GTF2IP78347 998 aa20.81■□□□□ 0.92
RPL28-209ENST00000560055 ARAP2Q8WZ64 1704 aa20.81■□□□□ 0.92
RPL28-209ENST00000560055 FAM205AQ6ZU69 1335 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 A0A1B0GUL7 405 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 ZBTB22O15209 634 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 POTEIP0CG38 1075 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 POTEJP0CG39 1038 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 ADORA1P30542 326 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 TIMM10P62072 90 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 VPS37DQ86XT2 251 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 MICALL2Q8IY33 904 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 MXD3Q9BW11 206 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 GPR108Q9NPR9 543 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 CNOT7Q9UIV1 285 aaKnown RBP20.8■□□□□ 0.92
RPL28-209ENST00000560055 EXOC6BQ9Y2D4 811 aa20.8■□□□□ 0.92
RPL28-209ENST00000560055 MYO3BQ8WXR4 1341 aa20.79■□□□□ 0.92
RPL28-209ENST00000560055 OS9Q13438 667 aaPredicted RBP20.79■□□□□ 0.92
RPL28-209ENST00000560055 PNMA8AQ86V59 439 aaPredicted RBP20.79■□□□□ 0.92
RPL28-209ENST00000560055 ADARB2Q9NS39 739 aaKnown RBP20.79■□□□□ 0.92
RPL28-209ENST00000560055 PCDHB15Q9Y5E8 787 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms