RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 PSMC1P62191 440 aaKnown RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 G3BP1Q13283 466 aaKnown RBP eCLIP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 CUL4AQ13619 759 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 SEPT7Q16181 437 aaKnown RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 CEP128Q6ZU80 1094 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 EXOC8Q8IYI6 725 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ANKRD44Q8N8A2 993 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 GAS2L2Q8NHY3 880 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 NECTIN2Q92692 538 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 BHMTQ93088 406 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 OSBPL3Q9H4L5 887 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 KCND1Q9NSA2 647 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 MIS18AQ9NYP9 233 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 LUC7L2Q9Y383 392 aaKnown RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ZCCHC11Q5TAX3 1644 aaKnown RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 EFCAB6Q5THR3 1501 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 LRRD1A4D1F6 860 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 KLHL33A6NCF5 533 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 PDLIM1O00151 329 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 GNAI2P04899 355 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 SLFN14P0C7P3 912 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 TRHP20396 242 aaPredicted RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 SFPQP23246 707 aaKnown RBP eCLIP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 VAV2P52735 878 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 LACTBP83111 547 aaPredicted RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 AIMP1Q12904 312 aaKnown RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 CEP85LQ5SZL2 805 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 CCDC181Q5TID7 509 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 GGT6Q6P531 493 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 SYT10Q6XYQ8 523 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 SSH1Q8WYL5 1049 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 KIF1BPQ96EK5 621 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 IL17RAQ96F46 866 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 TOMM22Q9NS69 142 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 HMG20BQ9P0W2 317 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 LIMCH1Q9UPQ0 1083 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ITSN1Q15811 1721 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 RTL1A6NKG5 1358 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 PLEKHG2Q9H7P9 1386 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ZFYVE16Q7Z3T8 1539 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 PPRC1Q5VV67 1664 aaKnown RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 PXDNLA1KZ92 1463 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 VWDEQ8N2E2 1590 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ELF1P32519 619 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 MTHFSP49914 203 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 VASPP50552 380 aaPredicted RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 RIPPLY1Q0D2K3 151 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ATP2B3Q16720 1220 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 PHLDB2Q86SQ0 1253 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ILDR1Q86SU0 546 aaPredicted RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 IQCA1Q86XH1 822 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 MRPL50Q8N5N7 158 aaKnown RBP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 TRIM58Q8NG06 486 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 MRFAP1L1Q96HT8 127 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 MIS12Q9H081 205 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 GOPCQ9HD26 462 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 BABAM1Q9NWV8 329 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 VPS18Q9P253 973 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 CEP126Q9P2H0 1117 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.72□□□□□ -1.97
RGPD1-204ENST00000559485 ODF2LQ9ULJ1 636 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 CYP46A1Q9Y6A2 500 aa2.72□□□□□ -1.97
RGPD1-204ENST00000559485 NPHP3Q7Z494 1330 aa2.71□□□□□ -1.97
RGPD1-204ENST00000559485 GCOM1H8Y6P7 765 aaPredicted RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 STX6O43752 255 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 IGSF3O75054 1194 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 PPFIA2O75334 1257 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 F13A1P00488 732 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 LMNAP02545 664 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 VDRP11473 427 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 CORO7P57737 925 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 PPFIA1Q13136 1202 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 SLC4A8Q2Y0W8 1093 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 TWISTNBQ3B726 338 aaPredicted RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 CCDC174Q6PII3 467 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 SARM1Q6SZW1 724 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 TSHZ1Q6ZSZ6 1077 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 CCDC80Q76M96 950 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 DDX46Q7L014 1031 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 GAS2L3Q86XJ1 694 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 CERS3Q8IU89 383 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 CCAR1Q8IX12 1150 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 RASSF8Q8NHQ8 419 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 MAGEC3Q8TD91 643 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 N4BP2L2Q92802 583 aaPredicted RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 DDX27Q96GQ7 796 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 TMX3Q96JJ7 454 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 NAA15Q9BXJ9 866 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 TRIM7Q9C029 511 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 ARHGEF40Q8TER5 1519 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 H3BQV1 296 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 C21orf2O43822 256 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 KINO60870 393 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 MYZAPP0CAP1 466 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 TROVE2P10155 538 aaKnown RBP eCLIP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 NOP2P46087 812 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 MTA1Q13330 715 aa2.71□□□□□ -1.98
RGPD1-204ENST00000559485 NKX1-1Q15270 411 aaPredicted RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 IFI16Q16666 785 aaKnown RBP2.71□□□□□ -1.98
RGPD1-204ENST00000559485 IFFO2Q5TF58 517 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms