RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 GOLPH3LQ9H4A5 285 aa19.49■□□□□ 0.71
SPG11-215ENST00000559193 NCOA5Q9HCD5 579 aaKnown RBP19.49■□□□□ 0.71
SPG11-215ENST00000559193 DRC7Q8IY82 874 aa19.49■□□□□ 0.71
SPG11-215ENST00000559193 ZNF594Q96JF6 807 aaPredicted RBP19.48■□□□□ 0.71
SPG11-215ENST00000559193 RIOK3O14730 519 aaKnown RBP19.48■□□□□ 0.71
SPG11-215ENST00000559193 IQCB1Q15051 598 aa19.48■□□□□ 0.71
SPG11-215ENST00000559193 ZSCAN25Q6NSZ9 544 aa19.48■□□□□ 0.71
SPG11-215ENST00000559193 C11orf57Q6ZUT1 292 aaPredicted RBP19.48■□□□□ 0.71
SPG11-215ENST00000559193 CCAR1Q8IX12 1150 aaKnown RBP19.48■□□□□ 0.71
SPG11-215ENST00000559193 USP28Q96RU2 1077 aa19.48■□□□□ 0.71
SPG11-215ENST00000559193 BCL2L12Q9HB09 334 aa19.48■□□□□ 0.71
SPG11-215ENST00000559193 EYA2O00167 538 aa19.47■□□□□ 0.71
SPG11-215ENST00000559193 CAVIN2O95810 425 aa19.47■□□□□ 0.71
SPG11-215ENST00000559193 TICAM2Q86XR7 235 aa19.47■□□□□ 0.71
SPG11-215ENST00000559193 RNF113AO15541 343 aaKnown RBP19.47■□□□□ 0.71
SPG11-215ENST00000559193 IFIT1P09914 478 aaKnown RBP19.47■□□□□ 0.71
SPG11-215ENST00000559193 CHAF1AQ13111 956 aaPredicted RBP19.47■□□□□ 0.71
SPG11-215ENST00000559193 ILDR1Q86SU0 546 aaPredicted RBP19.47■□□□□ 0.71
SPG11-215ENST00000559193 TNS3Q68CZ2 1445 aa19.47■□□□□ 0.71
SPG11-215ENST00000559193 M0R2C6 588 aa19.46■□□□□ 0.71
SPG11-215ENST00000559193 PPFIA3O75145 1194 aa19.46■□□□□ 0.71
SPG11-215ENST00000559193 PDIA3P30101 505 aaKnown RBP19.46■□□□□ 0.71
SPG11-215ENST00000559193 SNW1Q13573 536 aaKnown RBP19.46■□□□□ 0.71
SPG11-215ENST00000559193 CHST3Q7LGC8 479 aa19.46■□□□□ 0.71
SPG11-215ENST00000559193 A0A1B0GUL7 405 aa19.46■□□□□ 0.71
SPG11-215ENST00000559193 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
SPG11-215ENST00000559193 CLIP2Q9UDT6 1046 aa19.46■□□□□ 0.71
SPG11-215ENST00000559193 A1BGP04217 495 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 ATF3P18847 181 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 CDC25BP30305 580 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 CCDC144BQ3MJ40 725 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 TTLL5Q6EMB2 1281 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 NAP1L2Q9ULW6 460 aaPredicted RBP19.45■□□□□ 0.7
SPG11-215ENST00000559193 CTAGE5O15320 804 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 GUCY1B3Q02153 619 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 STX1AQ16623 288 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 ZNF274Q96GC6 653 aaPredicted RBP19.45■□□□□ 0.7
SPG11-215ENST00000559193 PUS3Q9BZE2 481 aaKnown RBP19.45■□□□□ 0.7
SPG11-215ENST00000559193 ZBTB3Q9H5J0 574 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 UBR2Q8IWV8 1755 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 SPEF2Q9C093 1822 aa19.45■□□□□ 0.7
SPG11-215ENST00000559193 SARM1Q6SZW1 724 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 KCPQ6ZWJ8 1503 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 CARMIL3Q8ND23 1372 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 ENGASEQ8NFI3 743 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 ZNF396Q96N95 335 aaPredicted RBP19.44■□□□□ 0.7
SPG11-215ENST00000559193 CIAO1O76071 339 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 ATL3Q6DD88 541 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 CCDC191Q8NCU4 936 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 CACTINQ8WUQ7 758 aaKnown RBP19.44■□□□□ 0.7
SPG11-215ENST00000559193 OSBP2Q969R2 916 aa19.44■□□□□ 0.7
SPG11-215ENST00000559193 CCDC73Q6ZRK6 1079 aa19.43■□□□□ 0.7
SPG11-215ENST00000559193 FDPSP14324 419 aaKnown RBP19.43■□□□□ 0.7
SPG11-215ENST00000559193 CPDO75976 1380 aa19.43■□□□□ 0.7
SPG11-215ENST00000559193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.42■□□□□ 0.7
SPG11-215ENST00000559193 GOLGA6L19H0YKK7 550 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 FOXP2O15409 715 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 FAM160A1Q05DH4 1040 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.42■□□□□ 0.7
SPG11-215ENST00000559193 PKNOX2Q96KN3 472 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 GPHNQ9NQX3 736 aaPredicted RBP19.42■□□□□ 0.7
SPG11-215ENST00000559193 A0A087WWV3 80 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 CTIFO43310 598 aaKnown RBP19.42■□□□□ 0.7
SPG11-215ENST00000559193 FSIP1Q8NA03 581 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 ATG3Q9NT62 314 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 NWD2Q9ULI1 1742 aa19.42■□□□□ 0.7
SPG11-215ENST00000559193 KINO60870 393 aaKnown RBP19.41■□□□□ 0.7
SPG11-215ENST00000559193 FBXL16Q8N461 479 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 C16orf45Q96MC5 204 aaPredicted RBP19.41■□□□□ 0.7
SPG11-215ENST00000559193 ME1P48163 572 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 EVCP57679 992 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 MRFAP1L1Q96HT8 127 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 DCCP43146 1447 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 PCDH11XQ9BZA7 1347 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 PCDH11YQ9BZA8 1340 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 PAPPAQ13219 1627 aa19.41■□□□□ 0.7
SPG11-215ENST00000559193 DHX40Q8IX18 779 aaKnown RBP19.4■□□□□ 0.7
SPG11-215ENST00000559193 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
SPG11-215ENST00000559193 ADORA1P30542 326 aa19.39■□□□□ 0.7
SPG11-215ENST00000559193 FKBP4Q02790 459 aaKnown RBP eCLIP19.39■□□□□ 0.7
SPG11-215ENST00000559193 PCDHA7Q9UN72 937 aa19.39■□□□□ 0.7
SPG11-215ENST00000559193 ANKRD7Q92527 254 aa19.39■□□□□ 0.69
SPG11-215ENST00000559193 CEP126Q9P2H0 1117 aa19.39■□□□□ 0.69
SPG11-215ENST00000559193 HAND2P61296 217 aa19.39■□□□□ 0.69
SPG11-215ENST00000559193 ARID5BQ14865 1188 aa19.39■□□□□ 0.69
SPG11-215ENST00000559193 ZCRB1Q8TBF4 217 aaKnown RBP19.39■□□□□ 0.69
SPG11-215ENST00000559193 ANO10Q9NW15 660 aa19.39■□□□□ 0.69
SPG11-215ENST00000559193 RTEL1Q9NZ71 1219 aa19.39■□□□□ 0.69
SPG11-215ENST00000559193 ERVV-2B6SEH9 535 aa19.38■□□□□ 0.69
SPG11-215ENST00000559193 OTUD7BQ6GQQ9 843 aa19.38■□□□□ 0.69
SPG11-215ENST00000559193 LRRC8AQ8IWT6 810 aa19.38■□□□□ 0.69
SPG11-215ENST00000559193 FMR1NBQ8N0W7 255 aaPredicted RBP19.38■□□□□ 0.69
SPG11-215ENST00000559193 MRPS27Q92552 414 aaKnown RBP19.38■□□□□ 0.69
SPG11-215ENST00000559193 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
SPG11-215ENST00000559193 TNNT1P13805 278 aa19.38■□□□□ 0.69
SPG11-215ENST00000559193 SCARF1Q14162 830 aa19.38■□□□□ 0.69
SPG11-215ENST00000559193 TTC39AQ5SRH9 613 aa19.38■□□□□ 0.69
SPG11-215ENST00000559193 CHMP4CQ96CF2 233 aa19.38■□□□□ 0.69
SPG11-215ENST00000559193 XAGE2Q96GT9 111 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms