RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 WDR90Q96KV7 1748 aa13.52□□□□□ -0.25
TPM1-217ENST00000559108 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 APBB1O00213 710 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 ECE2O60344 883 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 CENPBP07199 599 aaPredicted RBP13.51□□□□□ -0.25
TPM1-217ENST00000559108 TIMM10P62072 90 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 UBE4AQ14139 1066 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 PUM3Q15397 648 aaKnown RBP13.51□□□□□ -0.25
TPM1-217ENST00000559108 ATP2B3Q16720 1220 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 SUPT20HQ8NEM7 779 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 MXD3Q9BW11 206 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 TMX4Q9H1E5 349 aaPredicted RBP13.51□□□□□ -0.25
TPM1-217ENST00000559108 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
TPM1-217ENST00000559108 DCTPP1Q9H773 170 aa13.51□□□□□ -0.25
TPM1-217ENST00000559108 A0A1B0GUL7 405 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
TPM1-217ENST00000559108 RAD17O75943 681 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 CXCL9Q07325 125 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
TPM1-217ENST00000559108 FBXO33Q7Z6M2 555 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 EAF2Q96CJ1 260 aaPredicted RBP13.5□□□□□ -0.25
TPM1-217ENST00000559108 ZC3H12CQ9C0D7 883 aaKnown RBP13.5□□□□□ -0.25
TPM1-217ENST00000559108 IL1RAPL2Q9NP60 686 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 CEP126Q9P2H0 1117 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 JAG2Q9Y219 1238 aa13.5□□□□□ -0.25
TPM1-217ENST00000559108 SHTN1A0MZ66 631 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 DDNO94850 711 aaPredicted RBP13.49□□□□□ -0.25
TPM1-217ENST00000559108 KCNJ4P48050 445 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 BCAMP50895 628 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
TPM1-217ENST00000559108 TNNI3KQ59H18 835 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 NIM1KQ8IY84 436 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 EYA3Q99504 573 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 VPS33BQ9H267 617 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 ZNRF3Q9ULT6 936 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 IQSEC3Q9UPP2 1182 aaPredicted RBP13.49□□□□□ -0.25
TPM1-217ENST00000559108 FPGT-TNNI3KV9GXZ4 949 aa13.49□□□□□ -0.25
TPM1-217ENST00000559108 POTECB2RU33 542 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 HMMRO75330 724 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 PHKA1P46020 1223 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 GRIK5Q16478 980 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 LPIN2Q92539 896 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 XAGE2Q96GT9 111 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 DBNDD2Q9BQY9 259 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 CD209Q9NNX6 404 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 DBNLQ9UJU6 430 aaKnown RBP13.48□□□□□ -0.25
TPM1-217ENST00000559108 SCN4AP35499 1836 aa13.48□□□□□ -0.25
TPM1-217ENST00000559108 PSMD14O00487 310 aa13.47□□□□□ -0.25
TPM1-217ENST00000559108 IL1R1P14778 569 aa13.47□□□□□ -0.25
TPM1-217ENST00000559108 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
TPM1-217ENST00000559108 SCARF1Q14162 830 aa13.47□□□□□ -0.25
TPM1-217ENST00000559108 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
TPM1-217ENST00000559108 TDRD7Q8NHU6 1098 aaKnown RBP13.47□□□□□ -0.25
TPM1-217ENST00000559108 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
TPM1-217ENST00000559108 COA1Q9GZY4 146 aa13.47□□□□□ -0.25
TPM1-217ENST00000559108 CCDC8Q9H0W5 538 aaPredicted RBP13.47□□□□□ -0.25
TPM1-217ENST00000559108 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
TPM1-217ENST00000559108 DOCK2Q92608 1830 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.25
TPM1-217ENST00000559108 SLC5A1P13866 664 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 SCNN1DP51172 638 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 DACT2Q5SW24 774 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 PI16Q6UXB8 463 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 SMC5Q8IY18 1101 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 ZNF526Q8TF50 670 aaPredicted RBP13.46□□□□□ -0.25
TPM1-217ENST00000559108 JDP2Q8WYK2 163 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 NMRK2Q9NPI5 230 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
TPM1-217ENST00000559108 GLTPD2A6NH11 291 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
TPM1-217ENST00000559108 YY1P25490 414 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 HIBADHP31937 336 aaKnown RBP13.45□□□□□ -0.26
TPM1-217ENST00000559108 AAMPQ13685 434 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 CCDC102BQ68D86 513 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 ZNF804AQ7Z570 1209 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 AACSQ86V21 672 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
TPM1-217ENST00000559108 KIF1BPQ96EK5 621 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
TPM1-217ENST00000559108 RAB11FIP3O75154 756 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 GMPSP49915 693 aaPredicted RBP13.44□□□□□ -0.26
TPM1-217ENST00000559108 GTF2IP78347 998 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 RASGRF1Q13972 1273 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 PODNQ7Z5L7 613 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 NEUROD6Q96NK8 337 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 GMLQ99445 158 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 BCL11AQ9H165 835 aa13.44□□□□□ -0.26
TPM1-217ENST00000559108 FAM205AQ6ZU69 1335 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 MAST2Q6P0Q8 1798 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 EGFRP00533 1210 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 VIL1P09327 827 aaKnown RBP13.43□□□□□ -0.26
TPM1-217ENST00000559108 ERC1Q8IUD2 1116 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 GPC2Q8N158 579 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 ZNF784Q8NCA9 323 aaPredicted RBP13.43□□□□□ -0.26
TPM1-217ENST00000559108 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 AKAP2Q9Y2D5 859 aa13.43□□□□□ -0.26
TPM1-217ENST00000559108 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms