RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TMC4Q7Z404 712 aa15.21■□□□□ 0.03
TPM1-216ENST00000558910 CDC5LQ99459 802 aaKnown RBP15.21■□□□□ 0.03
TPM1-216ENST00000558910 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.03
TPM1-216ENST00000558910 TAF1DQ9H5J8 278 aaPredicted RBP15.21■□□□□ 0.03
TPM1-216ENST00000558910 IQCA1LA6NCM1 817 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 ITGA6P23229 1130 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 EPHX2P34913 555 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 EPS15P42566 896 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 CXCL9Q07325 125 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 KIAA2012Q0VF49 1180 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 GPC2Q8N158 579 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 TBC1D16Q8TBP0 767 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 RTFDC1Q9BY42 306 aaPredicted RBP15.2■□□□□ 0.02
TPM1-216ENST00000558910 KCNQ5Q9NR82 932 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 GGA1Q9UJY5 639 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 ZNRF3Q9ULT6 936 aa15.2■□□□□ 0.02
TPM1-216ENST00000558910 IGHMBP2P38935 993 aaKnown RBP15.19■□□□□ 0.02
TPM1-216ENST00000558910 CASP7P55210 303 aa15.19■□□□□ 0.02
TPM1-216ENST00000558910 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
TPM1-216ENST00000558910 CIAPIN1Q6FI81 312 aa15.19■□□□□ 0.02
TPM1-216ENST00000558910 FBXW7Q969H0 707 aa15.19■□□□□ 0.02
TPM1-216ENST00000558910 ZNF594Q96JF6 807 aaPredicted RBP15.19■□□□□ 0.02
TPM1-216ENST00000558910 WDR90Q96KV7 1748 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 SHTN1A0MZ66 631 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 POTEMA6NI47 508 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 YDJCA8MPS7 323 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 GRM8O00222 908 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 PLIN1O60240 522 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 ECE2O60344 883 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 GMPSP49915 693 aaPredicted RBP15.18■□□□□ 0.02
TPM1-216ENST00000558910 FSTL1Q12841 308 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 TAF7LQ5H9L4 462 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 LMBR1LQ6UX01 489 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 HELBQ8NG08 1087 aaPredicted RBP15.18■□□□□ 0.02
TPM1-216ENST00000558910 EYA3Q99504 573 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 MPHOSPH8Q99549 860 aa15.18■□□□□ 0.02
TPM1-216ENST00000558910 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
TPM1-216ENST00000558910 NOB1Q9ULX3 412 aaKnown RBP15.18■□□□□ 0.02
TPM1-216ENST00000558910 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
TPM1-216ENST00000558910 APLP1P51693 650 aa15.17■□□□□ 0.02
TPM1-216ENST00000558910 FOXO4P98177 505 aa15.17■□□□□ 0.02
TPM1-216ENST00000558910 MAP1SQ66K74 1059 aaPredicted RBP15.17■□□□□ 0.02
TPM1-216ENST00000558910 POTEGQ6S5H5 508 aa15.17■□□□□ 0.02
TPM1-216ENST00000558910 SUCLG2Q96I99 432 aa15.17■□□□□ 0.02
TPM1-216ENST00000558910 MINPP1Q9UNW1 487 aa15.17■□□□□ 0.02
TPM1-216ENST00000558910 SPEF2Q9C093 1822 aa15.16■□□□□ 0.02
TPM1-216ENST00000558910 SNAP23O00161 211 aa15.16■□□□□ 0.02
TPM1-216ENST00000558910 PSMD14O00487 310 aa15.16■□□□□ 0.02
TPM1-216ENST00000558910 TAF5LO75529 589 aa15.16■□□□□ 0.02
TPM1-216ENST00000558910 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
TPM1-216ENST00000558910 KCNJ4P48050 445 aa15.16■□□□□ 0.02
TPM1-216ENST00000558910 SCNN1DP51172 638 aa15.16■□□□□ 0.02
TPM1-216ENST00000558910 RBM26Q5T8P6 1007 aaKnown RBP15.16■□□□□ 0.02
TPM1-216ENST00000558910 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
TPM1-216ENST00000558910 XDHP47989 1333 aa15.16■□□□□ 0.02
TPM1-216ENST00000558910 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
TPM1-216ENST00000558910 ST18O60284 1047 aa15.15■□□□□ 0.02
TPM1-216ENST00000558910 ALDH1L1O75891 902 aa15.15■□□□□ 0.02
TPM1-216ENST00000558910 IFIT5Q13325 482 aaKnown RBP15.15■□□□□ 0.02
TPM1-216ENST00000558910 TMEM92Q6UXU6 159 aa15.15■□□□□ 0.02
TPM1-216ENST00000558910 FRAT1Q92837 279 aaPredicted RBP15.15■□□□□ 0.02
TPM1-216ENST00000558910 PLA2G12BQ9BX93 195 aa15.15■□□□□ 0.02
TPM1-216ENST00000558910 BSDC1Q9NW68 430 aaPredicted RBP15.15■□□□□ 0.02
TPM1-216ENST00000558910 CSF1RP07333 972 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 ATP2B4P23634 1241 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 FMR1Q06787 632 aaKnown RBP eCLIP15.14■□□□□ 0.01
TPM1-216ENST00000558910 TNIP1Q15025 636 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 CCDC57Q2TAC2 916 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 ALDH1L2Q3SY69 923 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 LDHDQ86WU2 507 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 VPS33BQ9H267 617 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 PTPRCP08575 1304 aa15.14■□□□□ 0.01
TPM1-216ENST00000558910 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
TPM1-216ENST00000558910 KLRK1P26718 216 aa15.13■□□□□ 0.01
TPM1-216ENST00000558910 CCT4P50991 539 aaKnown RBP15.13■□□□□ 0.01
TPM1-216ENST00000558910 BICC1Q9H694 974 aaKnown RBP15.13■□□□□ 0.01
TPM1-216ENST00000558910 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
TPM1-216ENST00000558910 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
TPM1-216ENST00000558910 SNPHO15079 494 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 BCAR3O75815 825 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 RARSP54136 660 aaKnown RBP15.12■□□□□ 0.01
TPM1-216ENST00000558910 CHRNDQ07001 517 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 TRPM4Q8TD43 1214 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 GPRC5DQ9NZD1 345 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 CNOT7Q9UIV1 285 aaKnown RBP15.12■□□□□ 0.01
TPM1-216ENST00000558910 TNNQ9UQP3 1299 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 LRRC37AA6NMS7 1700 aa15.12■□□□□ 0.01
TPM1-216ENST00000558910 MYH3P11055 1940 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 TBC1D10BQ4KMP7 808 aaPredicted RBP15.11■□□□□ 0.01
TPM1-216ENST00000558910 LDHAL6AQ6ZMR3 332 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 SAMD7Q7Z3H4 446 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 PNMA8AQ86V59 439 aaPredicted RBP15.11■□□□□ 0.01
TPM1-216ENST00000558910 TXNRD3Q86VQ6 643 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 PUS3Q9BZE2 481 aaKnown RBP15.11■□□□□ 0.01
TPM1-216ENST00000558910 LTBP1Q14766 1721 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 RTL9Q8NET4 1388 aa15.11■□□□□ 0.01
TPM1-216ENST00000558910 H7C1D1 291 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms