RNA–Protein interactions for RNA: ENST00000558816.5

SEMA6D-210, Transcript of semaphorin 6D, humanhuman

TSL 5 BASIC

Gene SEMA6D, Length 4,419 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-210ENST00000558816 LRRFIP2Q9Y608 721 aaKnown RBP6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 CYP46A1Q9Y6A2 500 aa6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 SLIT2O94813 1529 aa6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 NUCB2P80303 420 aa6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 SLC39A6Q13433 755 aa6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 LINS1Q8NG48 757 aa6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 CTCFLQ8NI51 663 aaPredicted RBP6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 NOC3LQ8WTT2 800 aaKnown RBP6.56□□□□□ -1.36
SEMA6D-210ENST00000558816 SH3TC1Q8TE82 1336 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 PPP4R3AQ6IN85 833 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 NUP133Q8WUM0 1156 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 MAST3O60307 1309 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 KRT24Q2M2I5 525 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 CNKSR1Q969H4 720 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 ZFYP08048 801 aaPredicted RBP6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 IL15P40933 162 aaPredicted RBP6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 PIP4K2AP48426 406 aaPredicted RBP6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 CCDC96Q2M329 555 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 BLOC1S2Q6QNY1 142 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 SLC16A10Q8TF71 515 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 TNNQ9UQP3 1299 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 TCHHQ07283 1943 aa6.55□□□□□ -1.36
SEMA6D-210ENST00000558816 TRAK2O60296 914 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 PHKG2P15735 406 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 MKRN3Q13064 507 aaKnown RBP6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 GRM1Q13255 1194 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 ARHGEF6Q15052 776 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 CERS3Q8IU89 383 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 TMEM87AQ8NBN3 555 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 PCMTD1Q96MG8 357 aaPredicted RBP6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 MINDY4BA8MYZ0 360 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 EPS15P42566 896 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 ATP2B3Q16720 1220 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 LARGE2Q8N3Y3 721 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 ZNF396Q96N95 335 aaPredicted RBP6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 IRS4O14654 1257 aaPredicted RBP6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 MCM4P33991 863 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 NIM1KQ8IY84 436 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 CCDC82Q8N4S0 544 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 IL1RAPL2Q9NP60 686 aa6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 DDX21Q9NR30 783 aaKnown RBP eCLIP6.54□□□□□ -1.36
SEMA6D-210ENST00000558816 F6X3S4 739 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 MRE11P49959 708 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 SKOR2Q2VWA4 1001 aaPredicted RBP6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 ZC3H15Q8WU90 426 aaKnown RBP6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 CCDC12Q8WUD4 166 aaPredicted RBP6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 H7C1D1 291 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 HMGB1P09429 215 aaKnown RBP6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 KIF5BP33176 963 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 IL17REQ8NFR9 667 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 RNF25Q96BH1 459 aaPredicted RBP6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 SH2D4AQ9H788 454 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 SLC52A2Q9HAB3 445 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 LGR6Q9HBX8 967 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 GRM8O00222 908 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 CLCN1P35523 988 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 RABEP1Q15276 862 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 ZNF790Q6PG37 636 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 AOX1Q06278 1338 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 OFD1O75665 1012 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 ODF2Q5BJF6 829 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 CT47A1Q5JQC4 288 aaPredicted RBP6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 GJA3Q9Y6H8 435 aa6.53□□□□□ -1.36
SEMA6D-210ENST00000558816 MSNP26038 577 aaKnown RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 TCIRG1Q13488 830 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 ZSCAN31Q96LW9 406 aaPredicted RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 SCLT1Q96NL6 688 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 RAB34Q9BZG1 259 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 VEZTQ9HBM0 779 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 BCS1LQ9Y276 419 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 GTPBP6O43824 516 aaPredicted RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 ATP2B1P20020 1258 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 ZNF445P59923 1031 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 DPP8Q6V1X1 898 aaPredicted RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 PAF1Q8N7H5 531 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 ECHDC1Q9NTX5 307 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 CHPF2Q9P2E5 772 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 GGA1Q9UJY5 639 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 EXOC6BQ9Y2D4 811 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 ZNF646O15015 1829 aaPredicted RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 RPAP1Q9BWH6 1393 aaPredicted RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 RANBP6O60518 1105 aaKnown RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 MX1P20591 662 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 HSP90AA2PQ14568 343 aaPredicted RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 HS1BP3Q53T59 392 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 CHD1LQ86WJ1 897 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 MYH3P11055 1940 aa6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 COL5A3P25940 1745 aaPredicted RBP6.52□□□□□ -1.37
SEMA6D-210ENST00000558816 ZNF213O14771 459 aa6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 STIM1Q13586 685 aa6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 GRIPAP1Q4V328 841 aa6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 NAA16Q6N069 864 aaPredicted RBP6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 LMBR1LQ6UX01 489 aa6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 NEK4P51957 841 aa6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 TNFAIP1Q13829 316 aa6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 RC3H1Q5TC82 1133 aaKnown RBP6.51□□□□□ -1.37
SEMA6D-210ENST00000558816 TMC4Q7Z404 712 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms