RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 G3V3G9 751 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 NF2P35240 595 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 GJA5P36382 358 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 SLC4A8Q2Y0W8 1093 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 SLC9C1Q4G0N8 1177 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 DCAF8Q5TAQ9 597 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 ARMC9Q7Z3E5 817 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 PNISRQ8TF01 805 aaKnown RBP15.71■□□□□ 0.11
SMAD3-206ENST00000558739 SHISA4Q96DD7 197 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 LRCH3Q96II8 777 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 PODXL2Q9NZ53 605 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 ANKIB1Q9P2G1 1089 aa15.71■□□□□ 0.11
SMAD3-206ENST00000558739 HSP90AB3PQ58FF7 597 aa15.7■□□□□ 0.1
SMAD3-206ENST00000558739 SH3TC2Q8TF17 1288 aa15.7■□□□□ 0.1
SMAD3-206ENST00000558739 PTPN18Q99952 460 aa15.7■□□□□ 0.1
SMAD3-206ENST00000558739 GGA1Q9UJY5 639 aa15.7■□□□□ 0.1
SMAD3-206ENST00000558739 USP17L3A6NCW0 530 aa15.69■□□□□ 0.1
SMAD3-206ENST00000558739 USP17L4A6NCW7 530 aa15.69■□□□□ 0.1
SMAD3-206ENST00000558739 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
SMAD3-206ENST00000558739 RPS8P62241 208 aaKnown RBP15.69■□□□□ 0.1
SMAD3-206ENST00000558739 USP17L1Q7RTZ2 530 aa15.69■□□□□ 0.1
SMAD3-206ENST00000558739 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
SMAD3-206ENST00000558739 TIMELESSQ9UNS1 1208 aa15.69■□□□□ 0.1
SMAD3-206ENST00000558739 SPEF2Q9C093 1822 aa15.68■□□□□ 0.1
SMAD3-206ENST00000558739 SP3Q02447 781 aa15.68■□□□□ 0.1
SMAD3-206ENST00000558739 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
SMAD3-206ENST00000558739 DACT2Q5SW24 774 aa15.67■□□□□ 0.1
SMAD3-206ENST00000558739 TSPYL4Q9UJ04 414 aa15.67■□□□□ 0.1
SMAD3-206ENST00000558739 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
SMAD3-206ENST00000558739 ZBTB48P10074 688 aaPredicted RBP15.66■□□□□ 0.1
SMAD3-206ENST00000558739 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
SMAD3-206ENST00000558739 DPF3Q92784 378 aa15.66■□□□□ 0.1
SMAD3-206ENST00000558739 FBXW7Q969H0 707 aa15.66■□□□□ 0.1
SMAD3-206ENST00000558739 SLC10A4Q96EP9 437 aa15.66■□□□□ 0.1
SMAD3-206ENST00000558739 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
SMAD3-206ENST00000558739 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
SMAD3-206ENST00000558739 INHBEP58166 350 aa15.65■□□□□ 0.1
SMAD3-206ENST00000558739 ISCA1Q9BUE6 129 aa15.65■□□□□ 0.1
SMAD3-206ENST00000558739 ARHGAP39Q9C0H5 1083 aa15.65■□□□□ 0.1
SMAD3-206ENST00000558739 CDH23Q9H251 3354 aa15.65■□□□□ 0.1
SMAD3-206ENST00000558739 MTFR1Q15390 333 aa15.64■□□□□ 0.09
SMAD3-206ENST00000558739 PCDHAC2Q9Y5I4 1007 aa15.64■□□□□ 0.09
SMAD3-206ENST00000558739 AOX1Q06278 1338 aa15.64■□□□□ 0.09
SMAD3-206ENST00000558739 MAP3K11Q16584 847 aa15.63■□□□□ 0.09
SMAD3-206ENST00000558739 APOBEC3FQ8IUX4 373 aaKnown RBP15.63■□□□□ 0.09
SMAD3-206ENST00000558739 KIAA0825Q8IV33 1275 aa15.63■□□□□ 0.09
SMAD3-206ENST00000558739 ZBED3Q96IU2 234 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-206ENST00000558739 DEFB129Q9H1M3 183 aa15.63■□□□□ 0.09
SMAD3-206ENST00000558739 CHPF2Q9P2E5 772 aa15.63■□□□□ 0.09
SMAD3-206ENST00000558739 XDHP47989 1333 aa15.63■□□□□ 0.09
SMAD3-206ENST00000558739 ECM29Q5VYK3 1845 aa15.62■□□□□ 0.09
SMAD3-206ENST00000558739 ECM2O94769 699 aaPredicted RBP15.62■□□□□ 0.09
SMAD3-206ENST00000558739 PPP2R1AP30153 589 aa15.62■□□□□ 0.09
SMAD3-206ENST00000558739 PODNQ7Z5L7 613 aa15.62■□□□□ 0.09
SMAD3-206ENST00000558739 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
SMAD3-206ENST00000558739 OGFOD1Q8N543 542 aa15.62■□□□□ 0.09
SMAD3-206ENST00000558739 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
SMAD3-206ENST00000558739 COL25A1Q9BXS0 654 aaPredicted RBP15.62■□□□□ 0.09
SMAD3-206ENST00000558739 COL1A1P02452 1464 aaPredicted RBP15.61■□□□□ 0.09
SMAD3-206ENST00000558739 NFE2L2Q16236 605 aa15.61■□□□□ 0.09
SMAD3-206ENST00000558739 UBE2Q1Q7Z7E8 422 aa15.61■□□□□ 0.09
SMAD3-206ENST00000558739 TXNRD3Q86VQ6 643 aa15.61■□□□□ 0.09
SMAD3-206ENST00000558739 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
SMAD3-206ENST00000558739 PLEKHF1Q96S99 279 aa15.61■□□□□ 0.09
SMAD3-206ENST00000558739 ALPK3Q96L96 1907 aa15.6■□□□□ 0.09
SMAD3-206ENST00000558739 KLRK1P26718 216 aa15.6■□□□□ 0.09
SMAD3-206ENST00000558739 Q7L0L9 218 aa15.6■□□□□ 0.09
SMAD3-206ENST00000558739 PLBD2Q8NHP8 589 aa15.6■□□□□ 0.09
SMAD3-206ENST00000558739 BRI3BPQ8WY22 251 aa15.6■□□□□ 0.09
SMAD3-206ENST00000558739 MED23Q9ULK4 1368 aa15.6■□□□□ 0.09
SMAD3-206ENST00000558739 TESPA1A2RU30 521 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-206ENST00000558739 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-206ENST00000558739 NBPF12Q5TAG4 269 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-206ENST00000558739 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
SMAD3-206ENST00000558739 MS4A4AQ96JQ5 239 aa15.59■□□□□ 0.09
SMAD3-206ENST00000558739 TAF1CQ15572 869 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-206ENST00000558739 STRIP1Q5VSL9 837 aa15.58■□□□□ 0.08
SMAD3-206ENST00000558739 OTUD7BQ6GQQ9 843 aa15.58■□□□□ 0.08
SMAD3-206ENST00000558739 ELP3Q9H9T3 547 aa15.58■□□□□ 0.08
SMAD3-206ENST00000558739 CLRN2A0PK11 232 aa15.57■□□□□ 0.08
SMAD3-206ENST00000558739 CDAN1Q8IWY9 1227 aa15.57■□□□□ 0.08
SMAD3-206ENST00000558739 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
SMAD3-206ENST00000558739 MYO3BQ8WXR4 1341 aa15.57■□□□□ 0.08
SMAD3-206ENST00000558739 PPP1R12BO60237 982 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-206ENST00000558739 USP2O75604 605 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-206ENST00000558739 ATP2B4P23634 1241 aa15.56■□□□□ 0.08
SMAD3-206ENST00000558739 CTGFP29279 349 aa15.56■□□□□ 0.08
SMAD3-206ENST00000558739 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
SMAD3-206ENST00000558739 CERS5Q8N5B7 392 aa15.55■□□□□ 0.08
SMAD3-206ENST00000558739 DEFB123Q8N688 67 aa15.55■□□□□ 0.08
SMAD3-206ENST00000558739 STAP2Q9UGK3 403 aa15.55■□□□□ 0.08
SMAD3-206ENST00000558739 DNAH12Q6ZR08 3092 aa15.54■□□□□ 0.08
SMAD3-206ENST00000558739 CCL15-CCL14A0A0B4J2E2 113 aa15.54■□□□□ 0.08
SMAD3-206ENST00000558739 LACTBP83111 547 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-206ENST00000558739 CCL15Q16663 113 aa15.54■□□□□ 0.08
SMAD3-206ENST00000558739 CCDC152Q4G0S7 254 aa15.54■□□□□ 0.08
SMAD3-206ENST00000558739 ANKRD18AQ8IVF6 992 aa15.54■□□□□ 0.08
SMAD3-206ENST00000558739 ZBTB38Q8NAP3 1195 aaPredicted RBP15.54■□□□□ 0.08
SMAD3-206ENST00000558739 ZNF804BA4D1E1 1349 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms