RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 RAD17O75943 681 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 VIL1P09327 827 aaKnown RBP10.61□□□□□ -0.71
TPM1-213ENST00000558400 ATXN8OSP0DMR3 200 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 TRIM27P14373 513 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 MMP14P50281 582 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 C15orf52Q6ZUT6 534 aaKnown RBP10.61□□□□□ -0.71
TPM1-213ENST00000558400 GPRC5DQ9NZD1 345 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 FBXO3Q9UK99 471 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 CLEC11AQ9Y240 323 aa10.61□□□□□ -0.71
TPM1-213ENST00000558400 MROH5Q6ZUA9 1318 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 SCNN1DP51172 638 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 LBX1P52954 281 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 UBE4AQ14139 1066 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 EAPPQ56P03 285 aaPredicted RBP10.6□□□□□ -0.71
TPM1-213ENST00000558400 ANKRD44Q8N8A2 993 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 AGBL3Q8NEM8 1001 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 ADARB2Q9NS39 739 aaKnown RBP10.6□□□□□ -0.71
TPM1-213ENST00000558400 CNOT7Q9UIV1 285 aaKnown RBP10.6□□□□□ -0.71
TPM1-213ENST00000558400 RIPOR2Q9Y4F9 1068 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 MED23Q9ULK4 1368 aa10.6□□□□□ -0.71
TPM1-213ENST00000558400 THSD7BQ9C0I4 1608 aa10.59□□□□□ -0.71
TPM1-213ENST00000558400 USP17L3A6NCW0 530 aa10.59□□□□□ -0.71
TPM1-213ENST00000558400 USP17L4A6NCW7 530 aa10.59□□□□□ -0.71
TPM1-213ENST00000558400 PSMD14O00487 310 aa10.59□□□□□ -0.71
TPM1-213ENST00000558400 EPS15P42566 896 aa10.59□□□□□ -0.71
TPM1-213ENST00000558400 GMPSP49915 693 aaPredicted RBP10.59□□□□□ -0.71
TPM1-213ENST00000558400 USP17L1Q7RTZ2 530 aa10.59□□□□□ -0.71
TPM1-213ENST00000558400 FTSJ3Q8IY81 847 aaKnown RBP10.59□□□□□ -0.71
TPM1-213ENST00000558400 DZIP1LQ8IYY4 767 aaKnown RBP10.59□□□□□ -0.71
TPM1-213ENST00000558400 ZC3H15Q8WU90 426 aaKnown RBP10.59□□□□□ -0.71
TPM1-213ENST00000558400 ZNF594Q96JF6 807 aaPredicted RBP10.59□□□□□ -0.71
TPM1-213ENST00000558400 TAF1P21675 1872 aa10.59□□□□□ -0.71
TPM1-213ENST00000558400 PLIN1O60240 522 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 TAF5LO75529 589 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
TPM1-213ENST00000558400 STRIP1Q5VSL9 837 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 HELBQ8NG08 1087 aaPredicted RBP10.58□□□□□ -0.72
TPM1-213ENST00000558400 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 GPR101Q96P66 508 aaPredicted RBP10.58□□□□□ -0.72
TPM1-213ENST00000558400 MYH3P11055 1940 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 SCN4AP35499 1836 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 LRRC37AA6NMS7 1700 aa10.58□□□□□ -0.72
TPM1-213ENST00000558400 EYA2O00167 538 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 PDE8BO95263 885 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 GNAI2P04899 355 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 METTL24Q5JXM2 366 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 TTLL5Q6EMB2 1281 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
TPM1-213ENST00000558400 CNTROBQ8N137 903 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 OGFOD1Q8N543 542 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 MEIS3Q99687 375 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 CHMP4BQ9H444 224 aaKnown RBP10.57□□□□□ -0.72
TPM1-213ENST00000558400 CD209Q9NNX6 404 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 KCNQ5Q9NR82 932 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 WBP1LQ9NX94 342 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 RCAN3Q9UKA8 241 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 ZBTB12Q9Y330 459 aaPredicted RBP10.57□□□□□ -0.72
TPM1-213ENST00000558400 LRRFIP2Q9Y608 721 aaKnown RBP10.57□□□□□ -0.72
TPM1-213ENST00000558400 MYO3BQ8WXR4 1341 aa10.57□□□□□ -0.72
TPM1-213ENST00000558400 WTIPA6NIX2 430 aaPredicted RBP10.56□□□□□ -0.72
TPM1-213ENST00000558400 CCDC85CA6NKD9 419 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 CIAO1O76071 339 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 SASH1O94885 1247 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 PTPN12Q05209 780 aaKnown RBP10.56□□□□□ -0.72
TPM1-213ENST00000558400 MTX1Q13505 466 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 CAVIN4Q5BKX8 364 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 MICALL2Q8IY33 904 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 TMEM57Q8N5G2 664 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.56□□□□□ -0.72
TPM1-213ENST00000558400 PUS3Q9BZE2 481 aaKnown RBP10.56□□□□□ -0.72
TPM1-213ENST00000558400 COPRSQ9NQ92 184 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 CEP126Q9P2H0 1117 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 PGAP2Q9UHJ9 254 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 COL4A5P29400 1685 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 DUOX1Q9NRD9 1551 aa10.56□□□□□ -0.72
TPM1-213ENST00000558400 ITGBL1O95965 494 aaPredicted RBP10.55□□□□□ -0.72
TPM1-213ENST00000558400 IFIT1P09914 478 aaKnown RBP10.55□□□□□ -0.72
TPM1-213ENST00000558400 USP17L8P0C7I0 530 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 POTEJP0CG39 1038 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 IL1R1P14778 569 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 HIBADHP31937 336 aaKnown RBP10.55□□□□□ -0.72
TPM1-213ENST00000558400 IL15P40933 162 aaPredicted RBP10.55□□□□□ -0.72
TPM1-213ENST00000558400 RFX5P48382 616 aaPredicted RBP10.55□□□□□ -0.72
TPM1-213ENST00000558400 VEGFBP49765 207 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 LRRC24Q50LG9 513 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 VPS37DQ86XT2 251 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 GMLQ99445 158 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 PASKQ96RG2 1323 aa10.55□□□□□ -0.72
TPM1-213ENST00000558400 COL4A1P02462 1669 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 SNAP23O00161 211 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
TPM1-213ENST00000558400 SRGAP3O43295 1099 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 ZNF280AP59817 542 aaPredicted RBP10.54□□□□□ -0.72
TPM1-213ENST00000558400 FKBP1AP62942 108 aaKnown RBP10.54□□□□□ -0.72
TPM1-213ENST00000558400 GTF2IP78347 998 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms