RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ATG3Q9NT62 314 aa6.4□□□□□ -1.38
GABPB1-207ENST00000558335 RBM8AQ9Y5S9 174 aaKnown RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 MORC2Q9Y6X9 1032 aaPredicted RBP6.4□□□□□ -1.38
GABPB1-207ENST00000558335 TCHHQ07283 1943 aa6.4□□□□□ -1.39
GABPB1-207ENST00000558335 ABCC12Q96J65 1359 aa6.4□□□□□ -1.39
GABPB1-207ENST00000558335 SLC27A2O14975 620 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 FIBPO43427 364 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 COQ9O75208 318 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 SNRPA1P09661 255 aaKnown RBP6.39□□□□□ -1.39
GABPB1-207ENST00000558335 PRR29P0C7W0 189 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 CASQ1P31415 396 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 ATP6V1AP38606 617 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 GSDMDP57764 484 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 CDC37Q16543 378 aaPredicted RBP6.39□□□□□ -1.39
GABPB1-207ENST00000558335 C11orf91Q3C1V1 193 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 MCMDC2Q4G0Z9 681 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 HSP90B2PQ58FF3 399 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 ZSCAN25Q6NSZ9 544 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 CCDC73Q6ZRK6 1079 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 ARHGEF25Q86VW2 580 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 CCDC83Q8IWF9 413 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 IFNL2Q8IZJ0 200 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 FBXL16Q8N461 479 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 RNF214Q8ND24 703 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 LTV1Q96GA3 475 aaPredicted RBP6.39□□□□□ -1.39
GABPB1-207ENST00000558335 DCAF5Q96JK2 942 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 NEK1Q96PY6 1258 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 METTL22Q9BUU2 404 aaPredicted RBP6.39□□□□□ -1.39
GABPB1-207ENST00000558335 TMX4Q9H1E5 349 aaPredicted RBP6.39□□□□□ -1.39
GABPB1-207ENST00000558335 CNPY2Q9Y2B0 182 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.39□□□□□ -1.39
GABPB1-207ENST00000558335 SH3TC1Q8TE82 1336 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 MED23Q9ULK4 1368 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 DCCP43146 1447 aa6.39□□□□□ -1.39
GABPB1-207ENST00000558335 AFDNP55196 1824 aaKnown RBP6.39□□□□□ -1.39
GABPB1-207ENST00000558335 A0A1B0GUL7 405 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 H0YHG0 523 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 GCP02774 474 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 CAPN2P17655 700 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 IRX1P78414 480 aaPredicted RBP6.38□□□□□ -1.39
GABPB1-207ENST00000558335 XPCQ01831 940 aaPredicted RBP6.38□□□□□ -1.39
GABPB1-207ENST00000558335 STX1AQ16623 288 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 ESCO1Q5FWF5 840 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 SARM1Q6SZW1 724 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 RBM43Q6ZSC3 357 aaKnown RBP6.38□□□□□ -1.39
GABPB1-207ENST00000558335 NOL8Q76FK4 1167 aaKnown RBP6.38□□□□□ -1.39
GABPB1-207ENST00000558335 UNC5CLQ8IV45 518 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 DRC7Q8IY82 874 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 TXLNBQ8N3L3 684 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 ANKRD24Q8TF21 1146 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 ANKRD7Q92527 254 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 NECTIN2Q92692 538 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 CCDC34Q96HJ3 373 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 FMNL2Q96PY5 1086 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 CEP89Q96ST8 783 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 LARP6Q9BRS8 491 aaKnown RBP6.38□□□□□ -1.39
GABPB1-207ENST00000558335 DSCC1Q9BVC3 393 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 CLSTN2Q9H4D0 955 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 CXorf56Q9H5V9 222 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 ANO10Q9NW15 660 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 RSPH14Q9UHP6 348 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 AKAP2Q9Y2D5 859 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 WDR19Q8NEZ3 1342 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 PALLDQ8WX93 1383 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 TRPM3Q9HCF6 1732 aaPredicted RBP6.38□□□□□ -1.39
GABPB1-207ENST00000558335 MYH15Q9Y2K3 1946 aa6.38□□□□□ -1.39
GABPB1-207ENST00000558335 TMEM94Q12767 1356 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 ANKRD33BA6NCL7 494 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 NEURL1BA8MQ27 555 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 BECN2A8MW95 431 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 KINO60870 393 aaKnown RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 GADD45BO75293 160 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 CDKL5O76039 1030 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 CIAO1O76071 339 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 HCLS1P14317 486 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 USP8P40818 1118 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 IL15P40933 162 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 DNM1Q05193 864 aaKnown RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 TYRO3Q06418 890 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 MYBPC2Q14324 1141 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 GCKRQ14397 625 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 RABL6Q3YEC7 729 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 TEX35Q5T0J7 233 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 FOXD4L5Q5VV16 416 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 JAKMIP3Q5VZ66 844 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 NUTM2GQ5VZR2 741 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 TSHZ3Q63HK5 1081 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 ZNF790Q6PG37 636 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 CPLX2Q6PUV4 134 aaKnown RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 ANKRD13DQ6ZTN6 518 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 DHX32Q7L7V1 743 aaKnown RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 SUGP1Q8IWZ8 645 aaKnown RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 RASEFQ8IZ41 740 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 SDR16C5Q8N3Y7 309 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 TDRD7Q8NHU6 1098 aaKnown RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 KIAA1524Q8TCG1 905 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 BICD2Q8TD16 824 aa6.37□□□□□ -1.39
GABPB1-207ENST00000558335 FOXD4L4Q8WXT5 416 aaPredicted RBP6.37□□□□□ -1.39
GABPB1-207ENST00000558335 GTF3C6Q969F1 213 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms