RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CETN1Q12798 172 aa15.83■□□□□ 0.13
SPG11-210ENST00000558319 CSPG5O95196 566 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.12
SPG11-210ENST00000558319 AMPD3Q01432 767 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 SEPT14Q6ZU15 432 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 RAB3IL1Q8TBN0 382 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 MBIPQ9NS73 344 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 IRX5P78411 483 aaPredicted RBP15.83■□□□□ 0.12
SPG11-210ENST00000558319 MAEAQ7L5Y9 396 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 BRF1Q92994 677 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 DACT1Q9NYF0 836 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.83■□□□□ 0.12
SPG11-210ENST00000558319 CLNS1AP54105 237 aaKnown RBP15.83■□□□□ 0.12
SPG11-210ENST00000558319 RPUSD2Q8IZ73 545 aaKnown RBP15.83■□□□□ 0.12
SPG11-210ENST00000558319 SETDB2Q96T68 719 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 CDC5LQ99459 802 aaKnown RBP15.83■□□□□ 0.12
SPG11-210ENST00000558319 RASAL2Q9UJF2 1139 aa15.83■□□□□ 0.12
SPG11-210ENST00000558319 BAG3O95817 575 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 PPP1R12CQ9BZL4 782 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 NIP7Q9Y221 180 aaKnown RBP eCLIP15.82■□□□□ 0.12
SPG11-210ENST00000558319 ADGRF5Q8IZF2 1346 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 WTAPQ15007 396 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 FAM76AQ8TAV0 307 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 DHX58Q96C10 678 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 RNF41Q9H4P4 317 aaPredicted RBP15.82■□□□□ 0.12
SPG11-210ENST00000558319 UBLCP1Q8WVY7 318 aaPredicted RBP15.82■□□□□ 0.12
SPG11-210ENST00000558319 HPDP32754 393 aaPredicted RBP15.82■□□□□ 0.12
SPG11-210ENST00000558319 DNM1Q05193 864 aaKnown RBP15.82■□□□□ 0.12
SPG11-210ENST00000558319 SLF2Q8IX21 1173 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 SSX2IPQ9Y2D8 614 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 ANAPC4Q9UJX5 808 aa15.82■□□□□ 0.12
SPG11-210ENST00000558319 EVI5LQ96CN4 794 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 FAM114A2Q9NRY5 505 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 MCM7P33993 719 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 SMAP1Q8IYB5 467 aaPredicted RBP15.81■□□□□ 0.12
SPG11-210ENST00000558319 PPP1R9BQ96SB3 815 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 DBF4Q9UBU7 674 aaPredicted RBP15.81■□□□□ 0.12
SPG11-210ENST00000558319 NKTRP30414 1462 aaKnown RBP15.81■□□□□ 0.12
SPG11-210ENST00000558319 MAP7D1Q3KQU3 841 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 XAGE3Q8WTP9 111 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 NAPAP54920 295 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 PDE1CQ14123 709 aaPredicted RBP15.81■□□□□ 0.12
SPG11-210ENST00000558319 Q6ZUG5 572 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 NCOA7Q8NI08 942 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 GINS2Q9Y248 185 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 UBAP1LF5GYI3 381 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 TACC1O75410 805 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 TBC1D5Q92609 795 aa15.81■□□□□ 0.12
SPG11-210ENST00000558319 CRNKL1Q9BZJ0 848 aaKnown RBP15.81■□□□□ 0.12
SPG11-210ENST00000558319 PCK1P35558 622 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 FAM200AQ8TCP9 573 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 ALG1Q9BT22 464 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 SAMD15Q9P1V8 674 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 TTF1Q15361 905 aaPredicted RBP15.8■□□□□ 0.12
SPG11-210ENST00000558319 SREK1Q8WXA9 508 aaKnown RBP15.8■□□□□ 0.12
SPG11-210ENST00000558319 CHMP2AO43633 222 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 BUB1BO60566 1050 aaPredicted RBP15.8■□□□□ 0.12
SPG11-210ENST00000558319 SLC52A1Q9NWF4 448 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 TFCP2L1Q9NZI6 479 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 VIMP08670 466 aaKnown RBP15.8■□□□□ 0.12
SPG11-210ENST00000558319 KANK3Q6NY19 840 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 RPGRIP1LQ68CZ1 1315 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 SMARCC2Q8TAQ2 1214 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 ATAD2Q6PL18 1390 aa15.8■□□□□ 0.12
SPG11-210ENST00000558319 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 MAGEB6Q8N7X4 407 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 LACTBP83111 547 aaPredicted RBP15.79■□□□□ 0.12
SPG11-210ENST00000558319 STIM2Q9P246 746 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 ZFYP08048 801 aaPredicted RBP15.79■□□□□ 0.12
SPG11-210ENST00000558319 RAB3GAP1Q15042 981 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 AMOTQ4VCS5 1084 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 CEP120Q8N960 986 aa15.79■□□□□ 0.12
SPG11-210ENST00000558319 UTP14AQ9BVJ6 771 aaKnown RBP15.79■□□□□ 0.12
SPG11-210ENST00000558319 PPP2R5CQ13362 524 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 MEIS3Q99687 375 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 FEZ2Q9UHY8 353 aaPredicted RBP15.78■□□□□ 0.12
SPG11-210ENST00000558319 RNASE9P60153 205 aaKnown RBP15.78■□□□□ 0.12
SPG11-210ENST00000558319 PLCB3Q01970 1234 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 CCDC152Q4G0S7 254 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 STMN4Q9H169 189 aaPredicted RBP15.78■□□□□ 0.12
SPG11-210ENST00000558319 IFNKQ9P0W0 207 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 DDX39AO00148 427 aaKnown RBP15.78■□□□□ 0.12
SPG11-210ENST00000558319 TYRO3Q06418 890 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 CEP85LQ5SZL2 805 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 HDXQ7Z353 690 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 RRAGDQ9NQL2 400 aaPredicted RBP15.78■□□□□ 0.12
SPG11-210ENST00000558319 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 TNNI2P48788 182 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 ATP11AP98196 1134 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 KIF3CO14782 793 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 ASIC1P78348 528 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 IFNL2Q8IZJ0 200 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 STMN2Q93045 179 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 CTAGE1Q96RT6 745 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 ECHDC1Q9NTX5 307 aa15.78■□□□□ 0.12
SPG11-210ENST00000558319 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
SPG11-210ENST00000558319 TTC22Q5TAA0 569 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms