RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 CCDC194A0A1B0GVG4 234 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 UBA7P41226 1012 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 SPAG5Q96R06 1193 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 SPTLC2O15270 562 aa13.31□□□□□ -0.28
CSPG4P12-201ENST00000558282 GOLGA8KD6RF30 607 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 GRIPAP1Q4V328 841 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 CCDC122Q5T0U0 273 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 C8orf74Q6P047 294 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 FYB2Q5VWT5 728 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 TLDC2A0PJX2 215 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 CETN3O15182 167 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 ERCC3P19447 782 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 MTMR3Q13615 1198 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 KIF6Q6ZMV9 814 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 SMARCC2Q8TAQ2 1214 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 RAB3IPQ96QF0 476 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 HPDP32754 393 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 PAK2Q13177 524 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 PPP2R5AQ15172 486 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 VCX3AQ9NNX9 186 aa13.3□□□□□ -0.28
CSPG4P12-201ENST00000558282 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 TAOK1Q7L7X3 1001 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 DZIP1Q86YF9 867 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 GBP7Q8N8V2 638 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 UBLCP1Q8WVY7 318 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 DNAI2Q9GZS0 605 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 CLSTN2Q9H4D0 955 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 KCNK9Q9NPC2 374 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 LMBRD1Q9NUN5 540 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 VSIG1Q86XK7 387 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 EXOC1Q9NV70 894 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 KIF14Q15058 1648 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 STXBP4Q6ZWJ1 553 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 RIPOR2Q9Y4F9 1068 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 IDEP14735 1019 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 LIG3P49916 1009 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 ZGPATQ8N5A5 531 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 TBC1D5Q92609 795 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 EXOC4Q96A65 974 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 LARP6Q9BRS8 491 aaKnown RBP13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 ZNF287Q9HBT7 754 aa13.29□□□□□ -0.28
CSPG4P12-201ENST00000558282 CALCOCO2Q13137 446 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 PEX19P40855 299 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 IRX4P78413 519 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 BRAPQ7Z569 592 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 MCUR1Q96AQ8 359 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 ODF2LQ9ULJ1 636 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 ZNF215Q9UL58 517 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 ANKRD36BQ8N2N9 1353 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 PDE1AP54750 535 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 PLCB1Q9NQ66 1216 aa13.28□□□□□ -0.28
CSPG4P12-201ENST00000558282 PFDN1O60925 122 aa13.27□□□□□ -0.28
CSPG4P12-201ENST00000558282 KRT13P13646 458 aa13.27□□□□□ -0.28
CSPG4P12-201ENST00000558282 NLRP5P59047 1200 aa13.27□□□□□ -0.28
CSPG4P12-201ENST00000558282 APBA1Q02410 837 aa13.27□□□□□ -0.28
CSPG4P12-201ENST00000558282 NECAB1Q8N987 351 aa13.27□□□□□ -0.28
CSPG4P12-201ENST00000558282 NAPBQ9H115 298 aa13.27□□□□□ -0.28
CSPG4P12-201ENST00000558282 CBX8Q9HC52 389 aa13.27□□□□□ -0.28
CSPG4P12-201ENST00000558282 BICDL2A1A5D9 508 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 GNGT1P63211 74 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 LRRC23Q53EV4 343 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 IQCA1Q86XH1 822 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 BCAS4Q8TDM0 211 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 MAP7D1Q3KQU3 841 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 E7EVH7 732 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 CERS3Q8IU89 383 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 BRF1Q92994 677 aa13.27□□□□□ -0.29
CSPG4P12-201ENST00000558282 ZMYM3Q14202 1370 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 PRC1O43663 620 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 ERCC6LQ2NKX8 1250 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 HSP90AA5PQ58FG0 334 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 MMS22LQ6ZRQ5 1243 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 NCOA7Q8NI08 942 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 MTUS1Q9ULD2 1270 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms